Esox lucius (northern pike): 105017816
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Entry
105017816 CDS
T04894
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
els
Esox lucius (northern pike)
Pathway
els03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105017816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105017816
03021 Transcription machinery [BR:
els03021
]
105017816
03036 Chromosome and associated proteins [BR:
els03036
]
105017816
Transcription factors [BR:
els03000
]
Eukaryotic type
Helix-turn-helix
ARID
105017816
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105017816
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105017816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
CBP110
Motif
Other DBs
NCBI-GeneID:
105017816
NCBI-ProteinID:
XP_012994053
LinkDB
All DBs
Position
LG18:complement(6649363..6706546)
Genome browser
AA seq
2343 aa
AA seq
DB search
MATQVATALNSNGKKKSNLASSVSQDLKSGKSGVVGGAVLGVGNGTSVHAMNNVERHHHE
LNPNSRARAVPANNNSNQREKEIGDSRSTSFATSNSSMSSGSMETGMLASHKVKHVGVGD
HPPSYHHTPQQQSQQPFNQFIQHQQRQIHNNQQSIHGGESGNRQHGGKENVVLVNQVERH
QQQMLSKSEEDQPGKTEERMDSRYDHASLGPTNNINLSQSGNSSVSEFNSYYGNGRGGPS
FDQHGGQQSPGSGIMHSVQQNNMDQVPQNSHEGYHNNPYNHYPNYRPGYGNSGYGMMSPT
RQGNNMMGPGSNTAATNHSKAAMAAASSGANVGGFQRFPGQSRQHPSGATPTLNQLLTSP
SPVMRGYGTGYQDYTNPSAQQQQQSSMGLTKDISSQYGSATHGWGGQQRNLAMSPGNNGQ
GSGRSQVPPMDAMAMKRSQLYGMGNNPYSQQQQGGGGSYPGQPYGSPSPHRYPMGMPGRG
QMGMSGMQYPQQQQQVAAQYGQQQGGFCQPQGQGAYFSPPQQQPAAPTQPPYVQPRPPPQ
QEVSQERHGNRGQSAMTPGKPDHDDRPSSLPDLSGSIDDLPTGTDVAISSAVSASGSTSS
QGEQSNPARSPFSPHVSPRLPGLRSGPSPSPVGSPVGSSQSRSGPISPASVPGTQMAPQT
PGNVSDVGSHSTLSQSPMSQERGFPPAMQRNSQVPQPFGPQHSGQGPPMSPHPSSGGSMH
HQGSFHHQQQQQQQQQGGAGPSYGPQTGHYGPQGNYPRPSNYGGAPSANYSGPGPGMSNS
LGMNASSPMHGQGPGQPCGSMPAGRGVGPGASGRSYPGATTNTMAPTSPSMPQPAGQGMG
PPPPNVGRKPGLEAGPGPGTNVAQGPNAGSSGSAQGRPPYVRSPTYPGQSWPGARPPLSP
SPRPHTQTPPHPQTHPQHSPHPHRGSSSPPHPHCPSPRPQHPQVSGAQIHPVMKQPADQY
GQGGAPMSHHPGMGSLGPGGMGSYGLQPGAHTSGRMTPQGPHPLYNAPPPSGPMQTSGEG
MAGPPDPKQRPPEQHREGTAPATEPPPKAKDSYSLSQCMSQPPAPCPLSPSPAGLSLGQG
AEDSSHPAVAVPWPKTSASPKPSPATMTNEKIRVLYEMGAEPERRAWVDRYLSFMEERGT
PVPMLPAVGKKPLDLCRLYLCVREIGGLAMVNKNKKWRELSTHLNVGTSSSSASSLKKQY
IQYLFAYECRVERGEEPPLEIPGETKKQAQAKIQPPSPANSGSLQGPHTPQSTGSSSMTE
TSEAMKRPTPATTPHGHMTPQTVNRTSGGISVQDPFSEVSDPAFHKRGPMPPGGPYQQSG
GPADPMRMQYDANKDLYGGPRKGPGGGEPYGPGQMPGGAMQDMYPRGTPPAGMPGMGMGP
GSRPQYPYGPGYDRRPEHVMGQEGGMAPPGGQNNMGSSSGDPSMYSSNRYPNQRPHGHEG
YGQQPHGPLPYASHQPGMYPPQQGYKRPVGPEGMYGPPAKRHDGEGYNMQQYAGQQPDMY
SQYGGGGYLGPERRPMQGQYPYPYSRDRMGASQGPPQHGMMTGGPPSGVPAEGPQANVWH
PRTDMGYPGPYPGRQGQGPPYPGMGRGPGDDPEGRGGPPDQWPPGHPGQRQAPYPPHSYS
ASSSMASRQPPTSYQSSPSMANHIPQASSPSPFPRAMGGPGPLSPNNAGHYVGSMKKAGL
SGSMAGPHGAGIAGQGMLPLHRDISFPPGSVEATQPKLKARRRLTSKDTGTPEAWRVMMS
LKSGLLAESTWALDTINILLYDDNTVSSFTLSQLPGFLELIVEYFRRCLIEIFGILDEYE
VGTEGQRTLLGPITDQEEEEPVIPELDCHSDEEQRAGKSEETGPEKPTANHSTEVVTEEP
PMEVTVKEEKVEGETDEAVPEDSEPIQPQAPPEPRHKQASKYDKLPVKVEEKDAEEDQVE
ERQGLSLPRGFTSGLLHWKAGGGDSTAHIQTHLEGRGQEAHARERSEEGERPEQERTEAA
EGSAEEGAVAAATETTGDALGPLSERTQSPIFTPLEDEPRCWDEAPLSTAESWQDAMARR
CVCVSNVVRGLSFVPGNDGDMSRHPGLVLILGRLVLLHHQHPERKRKTPSYQREEEQGLA
CSRDQWWWDCLSALRENTLVTLANISGQLDLSLYPESICLPVLDGLLHWMVCPSAEAQDP
FTTAGCSSPLTPQRLVLECLCKLSIQDNNVDLLLATPPFSRQEKLYATLVRHVGERQSQV
CREMAVAVLSNLAQGDPTAARAVALQKGSVGTLIGFLEDCVAMAQYQQASHSLLHPAPHH
EPPSINMMCRAAKALLALATVEENRTEFVLYESRLLEISLSSVLSSAVAAIMCEVLFKIG
RSS
NT seq
7032 nt
NT seq
+upstream
nt +downstream
nt
atggctacacaagtggcaacagccctaaattcaaatggtaagaaaaagtctaatttagct
agcagcgtgagtcaggatttgaaatctggcaagtctggagtagttggtggagctgtgctt
ggggtaggaaatgggactagcgttcatgctatgaataatgtagaacgccatcaccatgaa
ttgaacccgaacagcagagctcgagctgttcctgcaaacaacaattcgaatcaacgtgag
aaggaaattggagattctagatcgacgtcttttgcgacttcaaattctagtatgagttcg
gggagtatggagacgggaatgcttgcgagtcataaagtgaaacatgttggtgtcggggat
catcctccatcgtaccaccacacaccacagcaacagtcgcaacagccattcaaccaattc
attcagcaccaacaacgccaaattcacaacaaccagcagtcgatacatggaggagaaagt
ggaaatcgccaacatggaggaaaagaaaatgtagttttagttaatcaggtcgaacgccat
cagcagcaaatgctcagtaaaagtgaggaggaccaaccgggcaaaacagaggaacggatg
gacagcaggtacgaccacgccagtttgggaccaactaataacatcaacctgtcccaaagt
gggaacagctcggtttcggagtttaatagttattatgggaatggaagaggagggcctagc
tttgatcaacatggcggacaacaaagcccagggtctgggataatgcattcggtacaacag
aataatatggatcaagtccctcaaaactctcacgaagggtaccacaacaacccgtacaat
cactacccgaactaccgacctggctatggtaacagtggatatgggatgatgagtcccact
cggcaggggaacaacatgatgggcccaggcagcaacaccgctgctactaatcatagcaaa
gctgccatggctgctgcctcttctggtgctaatgttggagggtttcagagatttccaggg
caaagtcggcagcatccttcaggggccaccccaactctgaaccagctactgacatctccg
agccctgtgatgcggggttatggcactggctatcaagattacactaatccctctgctcaa
caacaacaacaatcaagcatggggctgactaaagacataagctcccaatacggttcagct
actcatggttggggaggacaacaaagaaatcttgctatgagccctggaaacaacggacag
ggaagcggcagatcacaggtgccccctatggacgccatggcgatgaagcgctctcagctc
tatggcatgggcaacaacccttattcgcagcaacagcagggcgggggcgggtcctaccct
ggccagccatacggatcgccttctcctcaccgctatccaatgggaatgcccgggaggggt
cagatgggcatgagtggaatgcagtatcctcaacagcagcagcaggtggcggcccagtac
gggcagcagcagggcggtttctgccagccacagggccagggggcgtacttcagccctccc
cagcagcagcccgccgcccccacccagcccccctacgtgcagccacgcccaccgccgcag
caggaggtgtcacaggagcgccatggcaacaggggccagtctgctatgactcctggaaaa
cccgaccatgacgacaggccttccagtctacctgacctgtccggctccattgacgatctg
cccacgggcaccgacgtggccatcagctccgcggtcagcgcttcgggctccaccagcagc
cagggcgagcagagtaacccggcccggtcgcccttctccccccacgtgtcgccacgcctc
cctggcctgcgcagtggtccctcgccgtcacccgtcgggtcgcctgtgggttccagccag
tcgcgctccggacccatctccccagccagcgtcccaggcactcagatggcaccccagaca
cccgggaatgtgtctgacgtgggctcccattcgaccctgagccagtcccccatgtctcag
gagagagggttcccacctgccatgcagcggaacagccaggtccctcagccgtttggccct
cagcactcagggcaggggcccccaatgtcccctcacccgtcctccggaggctccatgcac
caccagggttccttccaccaccagcagcagcagcagcagcagcagcaggggggcgccggc
ccctcctatggaccccagactggccattatgggccccaaggtaattacccacggccgtcc
aactacggcggcgcccccagtgccaactacagcggccccggccccggcatgagcaatagc
ctggggatgaatgccagcagccccatgcacggtcaggggcccggacagccctgtggctcc
atgcccgcggggaggggcgtgggcccgggggccagcggacgctcctaccctggggccacc
accaacaccatggcacccacgtctcccagcatgcctcagcccgccgggcagggcatgggg
ccgcccccgccaaacgtcggccgcaagccgggcctcgaggcaggtccggggcccggcacc
aacgtcgcgcagggtcctaacgccggctccagtggttccgcacagggcagacctccctac
gtgcgttcgccgacctaccccggccagtcttggcctggggcacgccctcccctctctcct
tccccccgtccccacacacaaacccccccacacccccaaacccacccacagcacagtcct
cacccccatcgtggttcctcctcacccccccacccccactgcccttcgccccggcctcag
cacccccaggtcagcggcgctcagatccaccctgtgatgaagcagccggccgatcagtat
gggcagggcggggctcccatgtcccaccacccaggcatggggtccttggggcctggaggg
atgggatcctacggcctgcagccaggggcccacacgtctggaaggatgaccccgcagggg
ccacaccccctctacaacgcaccccctccctctgggcccatgcagacaagtggagagggg
atggcgggtccacccgaccccaaacagagacctccggagcagcacagggagggcaccgcc
cctgccaccgaacccccacccaaagccaaggacagctacagcctctctcagtgtatgtcc
cagccccccgccccctgtcccctgtcccccagcccggctggtctgtccctgggtcagggt
gcggaggacagcagccacccggctgtggctgttccctggccaaagacctcagccagccct
aagcccagcccggccaccatgaccaacgagaagatccgtgtcctgtatgagatgggggcg
gagcctgagaggcgggcgtgggtggaccgctacctgtccttcatggaggagagagggacg
ccggttcccatgctgcccgctgtcggcaagaagcccctggacctctgtcgcctctacctc
tgcgtccgagagattggaggcctggccatggtgaacaagaacaagaagtggcgcgagctg
tccacccacctcaacgtgggcacgtccagcagctccgccagctcgctgaagaagcagtac
atccagtacctgttcgcctacgagtgccgggtggagcggggcgaggagccgccactggag
atcccgggggaaacgaagaagcaggcccaggccaagatccagcccccctcccctgccaac
tcggggtctctgcagggcccccacaccccccagtccacaggaagcagttcgatgaccgag
acgtctgaggccatgaagcgccccacgcccgccaccacacctcacggacacatgaccccc
cagacggtcaacaggaccagtggtggcatcagtgtccaggaccccttttctgaggtcagt
gaccctgccttccacaagcgggggcccatgccccctggtggcccctaccaacagagcgga
ggcccggcagaccccatgagaatgcagtacgacgccaacaaggatctgtacggagggccc
cggaagggtccaggaggcggtgagccgtacgggccgggtcagatgcccggcggcgccatg
caggacatgtaccctcgggggacccccccagctggcatgccagggatgggcatgggccct
ggctcacgaccccagtacccatatgggccgggctacgacaggagaccagagcatgtcatg
ggtcaggaggggggtatggctccccctggtggtcaaaacaacatgggctcttccagcggg
gacccaagcatgtattcctccaacagataccctaatcaaaggccacatggacacgagggt
tacggccagcagccacacggccccctgccctacgcctctcaccagccaggaatgtacccc
cctcagcagggctacaagaggccagtgggaccagaggggatgtatggaccccccgctaaa
cgccatgacggggagggatacaatatgcagcagtacgcgggccagcagccggacatgtac
agtcagtacggaggggggggctacctgggaccagagcgcaggcccatgcagggccagtat
ccctacccctacagccgagaccgtatgggggccagccagggccccccgcaacatggcatg
atgaccggcgggcccccttctggggtccctgcggagggcccccaggccaacgtgtggcac
cccaggacagacatgggctaccccgggccctaccccggacgacagggccagggaccccct
taccctggcatgggccggggtccaggggatgacccagaaggcaggggggggcccccggac
cagtggccccccgggcacccgggccaacgccaggccccgtaccccccccactcgtattcc
gcttcttcctccatggcctcccgacagccccccacctcctaccagtccagccccagcatg
gccaaccacatccctcaagcatccagcccctcacccttcccccgcgccatgggaggcccc
gggcccctgtctcccaacaatgcgggccactacgtgggttctatgaagaaggcagggctg
tccgggtccatggctggcccacacggtgccgggatcgctggacagggcatgctgcccctc
cacagagatatcagcttcccgccaggctcagtggaggccacacagcccaagctaaaggcc
cgacgcagactaacctccaaggacactggaaccccagaggcgtggcgcgtgatgatgtcc
ctgaagtcaggtctgctggcagagagcacatgggccctggataccatcaacatccttctg
tacgatgacaacacagtgtcctccttcactctgtcacagttacctggctttctggagctg
atagtggagtacttccgacggtgcctgattgaaatatttgggatcctggatgagtacgaa
gtgggcaccgagggccaaaggacactgcttggaccaatcacagaccaggaagaggaggag
cctgtcattccagagctcgactgccattcagacgaagaacaaagggctggcaagtcagaa
gagacaggtccagaaaagcccacagccaaccacagcacagaggtggtcacagaggagccc
cccatggaggtcacggttaaagaggagaaggtggagggggagaccgatgaggcagtccct
gaggactctgagcccatccaaccccaggcgcccccagagcccagacacaaacaggccagc
aagtacgacaagctgcctgttaaggtggaggagaaggatgcggaggaggaccaggtggag
gagcgtcagggccttagtctgcccaggggcttcacctcaggcctgctgcactggaaggcc
ggcgggggggactccacagcccacatccagacccacctggagggacgtggccaggaggcc
cacgccagagagaggagtgaggagggcgagaggccggagcaggagaggaccgaagcagcg
gaggggagcgcggaagagggggccgttgccgcggcgaccgagaccaccggggatgcgctg
ggcccgctttcagagaggacccagagccccatattcaccccgctggaggacgagccccgc
tgctgggacgaggctccactgtccacggccgagtcctggcaggacgccatggcccgccgc
tgcgtctgcgtgtccaacgttgtccgcggcctctccttcgtccccgggaacgacggcgac
atgtcccgccacccgggcctggtgctgatcctgggccggctggtcctactccaccaccag
cacccagagaggaagaggaagacgcccagctaccagagggaggaggagcagggcctggcc
tgcagccgggaccagtggtggtgggattgcctctctgcgctgagggaaaacactctggtc
accctggctaacatctccggtcagctggacctatccctatacccggagagcatttgcctg
cccgtgctggacggcctgctccactggatggtgtgtccgtccgccgaggcccaggacccc
ttcacgacggccggctgctcctccccgctcaccccccagaggctggtgctggagtgcctg
tgcaagctgagcatccaggacaataacgtggacctgctgctggccacgccgccgttcagc
cgccaggagaagctctacgccaccctggtgcgccacgtgggcgagcggcagtcccaggtg
tgccgggagatggcggtggcggtgctctctaacctggcgcagggggacccgacagcggcg
cgtgccgtcgccctgcagaagggcagcgtgggcacgctgatcggcttcctggaggactgc
gtggccatggcccagtaccagcaggcgtcccacagcctgctccacccggcaccccaccac
gaaccgcccagcatcaacatgatgtgccgggctgccaaggctctactggccctggccacg
gtggaggagaaccggacagagtttgtgctctacgagagccggctcctggagatctccctg
tcctccgtgctgagctcggctgtggcggccatcatgtgtgaagtactgtttaagatcggc
cgctcttcgtga
DBGET
integrated database retrieval system
