Esox lucius (northern pike): 105017898
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Entry
105017898 CDS
T04894
Symbol
zc3h12d
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105017898 (zc3h12d)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
105017898 (zc3h12d)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
105017898
NCBI-ProteinID:
XP_010881191
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Position
LG18:complement(9333918..9342772)
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AA seq
589 aa
AA seq
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MDKHHGKVERFLKLGYSHRDITRVLESLHQDAQTNDILEELIKTCHTTTVPTTTLASRSG
PSNPKLVPRGCGSPQPSHSIDSDPTAGFRPVVIDGSNVAMSHGNKQVFSCRGLLLAVRWF
LERGIQDITVFVPLWRKEQPRPEAPMTDQHILHELEKRKILVYTPSRCVNGKRVVCYDDR
YIIKLAYESDGIVVSNDNYRDLQIEKPEWKKFIEERLLMYSFANDKFMPPDDPLGRNGPT
IDNFLRKKLWTPENKQHCPYGKKCTYGMKCKFYHPERSNQSQLSVADELRAKSKPTVQTE
GEWPGTTAGQRLSREAGVHTGRCEPDPAAPHLYRHPSTPPPLRKDHRSHCRAPSGDQCVG
HRDETGSPVLRIPSLCPSPSPDADEAFCSLEASLPVSLSRLYIQDQTKSTNGPTVSHAYS
SGVAGCSQTSGDYYPSSTYSSNTQRLSAGGLSGDPYVPQRLPQFGRDDSPSCECRQCPYG
QHLGSCSTHSNPVHFTESQYFQDPNPQRQSHSLPDCSLGRVYPGGNAALTRSSGGKASDS
EQRRSVKNQLSTLFPPSIVDYVMNVYPHTLNLTELVPLIQRFRTSHVPF
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcaccatggtaaagtggagcgtttcctaaagctgggctactcccacagggac
attacacgcgtgttggagagcctgcaccaggacgcccaaacgaacgacatcttagaggag
ctgatcaagacctgccacaccaccacagtcccaaccaccacacttgccagccgctcgggc
ccctccaatccaaagctggtcccccggggctgcgggtcgccccagcccagtcacagcatc
gactccgatcccacagcgggattccgacccgtggtcattgatggaagcaatgtggccatg
agccatggcaacaagcaagtgttttcgtgccgagggcttctgctggcggtcaggtggttc
ctggagcgcggtatccaggacatcaccgtgttcgtgcccctgtggaggaaggagcagccc
cgtcctgaggcccccatgacagatcagcacatcctccatgagctggagaagaggaagatc
ctggtttataccccgtcgcgatgtgtcaacggaaagagggtggtttgctacgacgaccgc
tacatcattaaactggcctacgagtcagacggaatcgttgtatccaacgacaactataga
gacttgcagatagaaaagccggagtggaagaagttcattgaggaaaggctgctgatgtac
agcttcgccaacgacaagttcatgcctccagatgatcctttgggaaggaatggcccgaca
attgacaacttcttgaggaaaaagctgtggaccccagaaaacaagcagcattgcccatat
ggaaagaagtgtacttacggcatgaagtgcaagttctaccacccagagcgttccaaccaa
tcacagctctccgtggcagacgagctgcgagccaagagcaagcccaccgttcagaccgag
ggtgagtggccaggcaccaccgccggccaaagactcagccgggaggccggcgtccacacg
ggccgctgtgagccggaccccgccgcgcctcatctgtacagacatccgtccacgccgcct
ccccttcgcaaagaccaccgttcccactgtagggctccttccggtgatcagtgcgtgggc
cacagagatgaaacgggcagcccggttctacgcattcccagcctctgccccagccccagc
ccagacgccgatgaagccttctgctccttggaagcatccctgcctgtgtcactctccaga
ctctacatccaggaccagaccaagagcaccaatgggccgacggtgtcccatgcctacagc
agtggggtagctggctgcagtcagaccagtggggactactacccctccagcacttacagt
agcaacacgcagaggctcagcgcaggtggcctctcaggggacccctacgtcccccagaga
ctgccgcagtttggccgtgatgactcaccgagctgcgagtgcaggcagtgcccgtacggc
cagcacctgggctcttgctccactcacagtaacccggtccatttcactgagtcacagtac
ttccaggatcccaatccacaacgacagagccacagccttccagactgtagcctgggacgg
gtctaccctggtggtaatgcggcgctgaccaggtccagcggtggtaaagcctcagacagt
gagcagaggaggagtgtgaagaaccagctcagtaccctgtttcctcccagcatcgtggac
tatgtaatgaacgtgtatccacacacacttaacttgacagagctggttcctctgatccag
aggttcagaaccagccatgttcccttctaa
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