Esox lucius (northern pike): 105018001
Help
Entry
105018001 CDS
T04894
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
els
Esox lucius (northern pike)
Pathway
els03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105018001 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105018001 (hbs1l)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105018001 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
AAA_16
Motif
Other DBs
NCBI-GeneID:
105018001
NCBI-ProteinID:
XP_028970262
LinkDB
All DBs
Position
LG18:complement(1557898..1588770)
Genome browser
AA seq
697 aa
AA seq
DB search
MSRHRNVRGYNYDEDFDDDDVYGQSVDDDYCISPATAAQFIYSSRQERPSVEPPLEEEEM
EEEEAIPTSPSLTHNLNPLDQGKLYSCLDQMRTVLGDAVPESVLTQAALRCAFDPQRALD
AVLSEESTRPPPPAAWTNQDVPLPQRANKERAVRANQEASGAPRPDKAKGRSVAENKLDL
EVLPKVARMTVSGNKQTTGFDVPSTVENGVVSRDLTVTTIPDTPSKRPETPSKASGGADE
SPSAPPPGRTPGKTKQQLDIRAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGHV
NQRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETPSKVVTLMDAPG
HKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHGLLVRSLGVTQLAVAVNK
MDQVNWQQERFKEITSKLGHFLKQAGFKDSDVFYVPTSGLSGENLTTKSKVLELTSWYSG
PCLLDQIDSFKPPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRILAMPPNE
TCTVKGISLHDEPLDWAAAGDHVSLTVTGMDIIKINVGCVFCGIKEPIRACSRFRARILL
FNIEVPITQGFPVLLHYQTISEPATIRKLVSVLHKSSGEVLKKKPKCLGKGMNAVVEIQT
QRPVALELYKDFKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcacagaaatgtcagaggctacaactacgatgaagattttgatgatgatgac
gtgtatggacaatctgtggatgatgactattgcatctcgcctgctacagcggcccagttc
atttactcgtctcgacaggagaggcccagtgttgaaccccccctagaagaagaggagatg
gaggaagaggaggccatacctacttccccaagcctcacacacaatcttaaccctctggac
caaggcaagctgtactcctgtctggaccagatgcgtacagtcttgggtgatgcagtgcca
gagtcagtcctaacccaggctgcactgcgttgcgcctttgacccccagagagcgctggac
gccgtcctatcagaagagagcactcggccaccgccccctgctgcttggaccaatcaagat
gtgccactgccacagagggccaataaggagagagcagtgagagcgaatcaggaagcctca
ggtgcccctcgaccagataaagctaaaggccgcagtgttgctgaaaataaactggacctg
gaggttctacctaaagttgcccggatgaccgtctcagggaacaaacagaccacaggcttt
gatgtgccgagtacagtggagaacggagtggtatccagggacttaactgtgacaaccatc
ccagacacaccctccaagcgaccggagaccccgtccaaagcttccgggggggcggacgag
tccccgtctgcccccccccctggacgcaccccggggaaaaccaagcagcaactggacatc
agagccgagctggagaaaagacaggggggcaaacccttactcaacctggtggtcataggt
catgtggatgctgggaagagtactctgatgggtcacctgttgtacctcttgggtcatgtt
aaccagcggaccatgcacaagtacgagcaggagtccaagaaggctggcaaggcttcgttc
gcctacgcctgggtcctggatgagaccggcgaggagagagaccggggtgtcaccatggat
gtgggaatgaccaaatttgagacgccgtctaaggtggtgaccctgatggatgccccagga
cacaaagacttcatccccaacatgatcactggagctgctcaggctgatgtggcagtgtta
gtggtagatgccagtagaggggagtttgaggccgggttcgaggcgggcggccagacgcgg
gagcacggtctcctggtccgctccctcggcgtcacgcagctggccgtagccgtcaacaag
atggaccaggtgaattggcagcaggagcgatttaaagagatcacatccaagcttggtcac
ttcctgaaacaggctggcttcaaggactctgatgtgttctacgttcccaccagtggtttg
tcaggggagaacctcaccactaagagtaaagtactggagctgacgtcctggtactctgga
ccctgtctgctggaccagattgattcgttcaaaccaccccagaggtccgtagacaagcct
tttagactgtgtgtctcggacgtctttaaagatcagggctcagggttctgtgtaacgggg
aagatcgaagcgggatacatccagactggcgacagaatactggccatgccgcccaatgag
acctgcactgttaaaggcatctctctgcatgatgaacctctggattgggctgccgctggg
gaccatgttagtctgactgtgactgggatggacatcatcaagatcaatgttggctgtgtg
ttctgtggtatcaaggagccaatcagagcctgttctcgcttcagggctagaatcctgctc
ttcaatatagaggtccctatcacacagggattccctgtgttgttgcactatcagaccatc
agtgaaccggccaccatccgaaagctggtcagtgttctgcacaagagcagtggagaggtg
ctcaagaagaaacccaaatgtttggggaagggtatgaatgcagtggtggagatccagaca
cagaggcctgttgcgttggaactctataaggacttcaaggaactcgggcgctttatgctg
agatatgtaggatccaccattgctgcaggggtcgtcaccgagatcaaagaatga
DBGET
integrated database retrieval system
