Esox lucius (northern pike): 105018286
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Entry
105018286 CDS
T04894
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
els04121
]
105018286
Enzymes [BR:
els01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105018286
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
105018286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
105018286
NCBI-ProteinID:
XP_010881890
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All DBs
Position
LG19:complement(12140100..12282456)
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AA seq
946 aa
AA seq
DB search
MYAGCRNICKEDKESYREVYSGKMDDEPCLKRGDCDFDREDVGVCQKGCGLLLSHTVVQG
EHCCLDALRVMNDTLQERSAILEHEARMERLRWGRREQSLLAQVSSLQSEAQLTALKYQR
KLHEYMLNINKIAESITGYYKSDPKASEVCDVSHVSEQGPAEPADALQNQPEHGSMPLVN
GRDYSKAGHDEAVETFRSAKDPIVVQVLRRNPSGRHGGTTQDVHVVDVCTQTDITFEHIM
ALAKLRATTPPVPDVCPFLLSDSCHSLHTVDQEFYEGTDYLSTLPADAERTEELEYEEVE
LCRLNSQEKLGLTLCYRTDEEEDMAIYVSEVGPNSIAARDGRIREGDRILQINGRDVQDR
EEAVAVLSSEDTRNIVLLVARPEIQLEEAWLDDEHSEFLEQLKMEMLEEQQREEMELEAL
HEEQEQLRGTEDDDITATCSSRTLDKDHSVGMLLKNSVDSSDHNVLLTHIQRKLSQCLRD
RRDCPERLDDEDEDIVEEGDRFQQLLELKCQIRNSGEYDLFYSRRSTIECSLGEPAGGVQ
RELRMLNEELRSIELECQNIMQTHKLRKGPVETQGDQGQQPSQPCGRPTPEAPRLHRDGR
DSPSRGKLGDINERPEKPEKSDKDSSSAYNTAESSRSTPLAMERSPEHSLQRRMVTITNQ
RNLRGSLGSPSPSPTHRPPHRAPIPGKDSSPDHSPNPSESDQTAPADQCLPARGGTGKLK
PLPPPRASQIPYLSPSQGSQHRQPDANIPAHARHYRSYMQLIQQRSAVEYAQSQLNLLSV
VKEPQLSPASEPKMEWKVKIRSDGTRYITKRPVRDKILRERALKIKEERSGGMTTDDDAM
SEMKMGRYWSKEERKQHLLRAKEQRRRREFMQRSRLESLRESPQSSSEGHKEVSIIELSH
KKMMKKRNKKILDNWMTIQELMTHGAKAPDDPRAKVHNAFLSVTTV
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcgggctgtagaaatatatgcaaagaggacaaggaaagttacagagaagtttac
tcgggcaagatggacgatgagccgtgtttgaaaagaggagactgtgactttgaccgcgaa
gatgtcggtgtctgccagaaaggatgcgggcttctgttgtcccacaccgttgttcaagga
gagcattgttgtttagatgcacttcgcgtgatgaatgacacgctccaggaaagaagcgct
atcttggagcatgaagcccgaatggagcggcttagatggggcaggagagagcagtcgctc
cttgcccaggtgtcatccctccagagcgaagcgcagctcactgctctcaagtatcaacga
aagttacacgaatacatgctgaatatcaacaaaatagccgaaagcataactggatattac
aagagtgacccgaaggcatctgaggtctgtgatgtgtcccacgtatcagagcagggtcct
gctgaaccagcggatgcactccagaaccagcctgaacatggctcgatgccactggtgaac
ggcagggactactccaaggccggtcatgacgaggcggtggagacgttccgctctgccaag
gaccccatcgtggtgcaggtgctcaggaggaacccctctggccgccatggcggcaccact
caggacgtgcacgttgtggacgtgtgcacgcagacggacatcacctttgaacacatcatg
gccctggccaagctccgagccaccaccccgcccgtgcctgacgtctgtcctttcctgttg
tctgacagctgtcactctctccacaccgtggaccaggagttctacgaagggacggactac
ctctccaccctgcccgccgacgctgagaggacggaggagttggagtacgaggaggtggag
ctgtgtcgcctcaacagccaggagaagctgggcctgacattgtgctaccggactgatgag
gaagaggacatggccatctacgtcagtgaggttgggccaaacagcatcgccgcacgggat
ggacgcatccgagaaggagaccgcatcttacagatcaacggtcgggatgtacaggacagg
gaggaagctgtagcggtgctctccagtgaagacaccaggaacattgttctgctggtggcc
aggcctgagatacagctggaggaggcgtggttggatgatgaacatagtgagtttctggag
cagttaaagatggagatgctggaggagcaacagagggaagagatggagctggaagcttta
catgaagagcaggagcagctcagaggaacagaagatgatgacatcactgccacctgttcg
tccagaactcttgacaaggaccacagcgtggggatgttactgaagaacagcgtcgacagc
tccgaccacaacgtcctcctaactcatatccaacggaaactgtcccagtgcctcagagac
agacgggactgtcccgagcgtttggatgacgaagacgaggacattgtggaggagggcgac
cgcttccaacagctgctcgaactcaagtgtcagatccgcaacagcggggagtacgacctg
ttctacagccgacgcagcaccatcgagtgcagcctcggcgagccggctggaggcgttcaa
cgcgagctccgcatgctcaacgaggagctccgcagcatcgaactagagtgccagaacatc
atgcagacgcataagctccgcaaggggccagtggagacgcagggggaccaaggtcagcag
ccctctcagccgtgtggtcgtcccacacccgaggcccctcgcctccaccgtgacggcagg
gactcccccagcaggggcaagctgggggacatcaacgagcgccccgagaagccggagaag
tcggacaaggacagctccagtgcctataacacggcagagagctcgcggagcactccgctg
gctatggagcgctcccccgaacactcactccagaggaggatggtcaccatcaccaaccag
aggaatctccgcggcagcctgggtagtcccagccccagccccacccaccggcctccccac
cgggcccccatcccagggaaggacagcagccccgaccacagccccaacccctccgagtcg
gaccagacggccccggcggaccagtgcttaccggcaaggggcgggactgggaagctgaaa
cctctgcctcctccaagggcttctcagatcccatacctttcgccctcccagggttcccag
caccggcagccggacgccaacatcccggcccacgcacgccactatcgtagctacatgcag
ctgatccagcagcgctccgccgtggagtatgcccagagtcagctcaacctgctcagcgtg
gtcaaggagccccagctgagccccgccagcgagcccaaaatggagtggaaggtgaagatt
cggagcgacggcacgcgctacatcaccaagaggcccgtcagggacaagatcttgcgggaa
cgcgccctaaaaattaaagaggagcgcagcggaggaatgaccacagatgacgacgcaatg
tccgagatgaagatgggacggtactggagtaaagaggagaggaagcaacatctgctcagg
gctaaagaacagagaagacgtagggagttcatgcagcgcagtcgcctggagagcctgaga
gagagcccacagagcagcagcgaaggacacaaggaggtcagcattattgaactgagccac
aagaagatgatgaagaagcgaaacaagaagatcctggacaactggatgaccattcaggaa
ttgatgacccatggggccaaagctcctgacgaccccagggccaaagttcacaacgcattc
ctgtcggtcaccacggtttag
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