Esox lucius (northern pike): 105018339
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Entry
105018339 CDS
T04894
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
els
Esox lucius (northern pike)
Pathway
els04620
Toll-like receptor signaling pathway
els04621
NOD-like receptor signaling pathway
els04622
RIG-I-like receptor signaling pathway
els04623
Cytosolic DNA-sensing pathway
els05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
els00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
105018339 (irf7)
04621 NOD-like receptor signaling pathway
105018339 (irf7)
04622 RIG-I-like receptor signaling pathway
105018339 (irf7)
04623 Cytosolic DNA-sensing pathway
105018339 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105018339 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105018339 (irf7)
Transcription factors [BR:
els03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
105018339 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
105018339
NCBI-ProteinID:
XP_010881979
UniProt:
A0A3P8ZH33
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Position
LG19:complement(15733611..15737225)
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AA seq
448 aa
AA seq
DB search
MQSGNPRPQFADWLIAQVHTQQYTGLCFVGENMFRVPWKHNSRKDCSEDDSRIFREWAVV
SGKIHENPNDKAKWKTNFRCALNNLNKRFKMIHDHSKDSDDPHKVYQIINNQYDYERQKN
EQVTIEDDGVDIYCSLTPTDFHLPDMELDQLNLSNLKLDPFDLNNHHTEDYINPPNPVVL
NDCYPIQPLPKPVSNQPLPEPKPGPKNNSTAHETYYHVNQDVLLNQPATPEWFCGLEITI
SYRKVEMLKTQVSCPRVQLHYQCDSFEPNAQTVCFPNTDRLLDHKQIEYTKRILGSVKRG
LLLEVQSTGIFGYRQDKCHVFASTCDPREVHPEPRKMPQNEMVQLLSFQKFENELMAFKE
NKRGSPDYTIHMCFGEKFPDGKPLEKKLICVKVVPLICRHFHEVAQGEGASSLHNDNISL
QISNHNSLMELIAATWPDGPQCTMEQYL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtggcaaccctagacctcagtttgctgactggctgatagcacaggtgcacacc
cagcaatacaccgggttatgcttcgtgggtgaaaacatgtttagagtcccgtggaaacac
aattctaggaaggactgcagcgaggatgacagtagaatattcagggaatgggcagtggtt
agtggtaaaatccatgaaaatcccaatgacaaggcaaagtggaagaccaacttccgctgt
gcgctgaacaacctgaataaacgcttcaagatgattcatgatcactccaaggactctgat
gacccacataaagtctaccagatcatcaacaatcagtatgactatgagagacaaaaaaat
gagcaagtcaccatagaggacgatggggttgacatctactgctctctcacccctacagat
ttccaccttccagacatggagctcgatcagctcaatttgagtaacctgaaactggacccc
tttgatctgaacaaccatcacacagaggattatataaatccacccaacccagtggtactc
aatgactgctaccccatccagcctcttccaaagccagtctccaaccagcctcttccagag
ccaaagccaggtcccaagaacaactcaacagcacatgaaacatactatcacgtgaaccag
gatgtcctgctgaatcagcctgccaccccagaatggttctgtggcctggagataacaatc
tcctacagaaaggtggagatgttgaagactcaggtgtcctgtcccagggttcagctccac
taccagtgtgattcctttgagcccaacgcccagaccgtttgcttccccaacactgacagg
ctactggaccacaaacagattgaatacaccaaacgcatcctggggagtgttaaaaggggt
cttctgctagaggtacaaagcacaggcatctttggttacaggcaggacaaatgccatgtg
tttgcaagtacttgtgaccccagagaggtgcatcctgaacccaggaagatgccacaaaat
gaaatggtacaactgttgagcttccaaaagtttgagaatgagctgatggcgtttaaggaa
aacaagcggggctcacctgactacaccatccatatgtgttttggagagaaattcccagat
gggaaacccctggagaaaaaactaatctgtgtcaaggtggtccccctgatttgtcgtcac
ttccatgaggtggcacagggggagggagcatcgtccctccataacgataatatcagcctg
cagatctcaaaccacaacagcctgatggagctcatcgcagccacctggcctgatggccca
cagtgcacaatggagcaatacttgtag
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