Esox lucius (northern pike): 105018447
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Entry
105018447 CDS
T04894
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105018447 (ctcf)
03036 Chromosome and associated proteins [BR:
els03036
]
105018447 (ctcf)
Transcription factors [BR:
els03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105018447 (ctcf)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105018447 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
zf-C2H2_REST
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_15
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
105018447
NCBI-ProteinID:
XP_010882164
LinkDB
All DBs
Position
LG19:25816290..25825654
Genome browser
AA seq
800 aa
AA seq
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MKYSYLVQMDGGPTNIVVEAKDSISYEGEEVVADLLQQAAEGVIDQQPEEEAGLDSQQLV
EGVNVEMMVMDSLDPALLQMKTEAMDAPVATAHEATVTTVDETQIITLQVVNMEEQQLGG
LGELQLVQVPVSAVPVTQATVDALQGSFVDATAMPKDGDPVICHTLPLPEGFQVVKVGAN
GEVETVEQDELHHQEQQPVQPEEEEEEGEELHCEPLAEDPQWTKDPDYQPPAKKTTKKAK
KSKLRYNTEGDKDNMDVSVYDFEEEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTF
QCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQD
CDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSY
ASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVI
ARKSDLGVHLRKQHSFIEQGRKCRYCDALFHERYALIQHQKSHKNEKRFKCDQCDYCCRQ
ERHMLMHRRTHTGEKPYACTQCEKTFRQKQLLDMHFRRYHDPTFVPTAFVCTKCGKTFTR
RNTMARHAENCNGDPVEGENGTPAKKGRGGRKKKMRSRKDDDDDEDDSEDNIEHELDDID
EEDEEAEAALLEEEEEDEEMELDQAPPTKPIPAPLEPPVKRKRGRPPKNAPKASPPAKVS
KASPKGKSAAAAAIIQVEDENTGAIENIIVKKEPEAEQAAVEVLVEHSEEPVVETVEVPV
AEAAPNGDLTPEMILSMMDR
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattcctatctggtgcagatggacggaggaccaaccaacattgtggttgaggcc
aaggacagcatctcctatgagggtgaggaggtggtggccgatctgctccagcaagcagcg
gagggagtgatagaccagcagccagaggaggaggcgggactggattcccagcagctggtg
gagggagtcaatgtggagatgatggtaatggactccctggacccagcactgctgcagatg
aagacagaggcgatggatgcccctgtggccacagcccatgaggctaccgtcaccacagtg
gatgaaacccagatcatcaccctgcaagtggttaacatggaggagcagcaactgggaggc
ctcggggagctacagctggtccaggtgcctgtgtctgccgtgcctgtcacccaggccacc
gtagatgctctccagggctcttttgtggacgctacggcaatgcccaaagacggagaccct
gtgatctgtcacaccctgcccttgccggagggcttccaggttgtgaaggtgggtgcaaat
ggcgaggtagagacagtggagcaggatgagcttcaccaccaggagcagcagccggtacag
cctgaggaagaagaggaggagggggaggagctgcactgcgagcccctggcagaagaccca
caatggaccaaggacccagactaccagcctccggccaagaagactaccaagaaggcaaag
aagagcaagctgcggtacaacactgaaggggacaaggacaacatggacgtgtctgtgtac
gacttcgaggaggagcagcaggagggcatgctatcagaggtcaatgcagaaaaggtggtg
ggcaacatgaagccccccaaacccaccaagatcaagaagaagggtgttaagaaaacattc
cagtgtgagctgtgtagctacacctgcccccgtcgctccaacctggaccggcacatgaag
agtcacaccgacgagaggcctcacaagtgccacctgtgtgggagggccttccggactgtc
acccttctgaggaaccacctcaacacgcacacaggcaccagaccgcacaagtgccaggac
tgtgacatggcctttgttaccagcggcgagctggtccggcatcgtcgatacaaacacacc
cacgagaagcccttcaagtgctccatgtgtgactatgccagcgtggaggtgagcaagctg
aagcgccacatccgttcccacacgggggagcgtccgttccagtgcagtctgtgcagctac
gccagcagggacacctacaagctgaagaggcacatgaggacacactcaggagagaagccg
tacgagtgctacatctgccacgcccgtttcacccagagcggaaccatgaagatgcacatc
ctgcagaagcacacggagaacgtggccaagttccactgcccccactgtgacactgtcatc
gcccgcaagagtgacctgggcgtccacctgcgtaagcagcactcgttcattgagcagggc
aggaagtgtcgttactgtgacgccttgttccacgagcgctacgctctgatccagcaccag
aagtcccataagaacgagaagcgcttcaagtgtgaccagtgtgactactgctgcagacag
gagcgacacatgttgatgcacaggcgcacccatacaggggagaagccatacgcctgcacc
cagtgtgagaagaccttccggcagaagcagctcctggacatgcacttccggcgctaccat
gaccccacctttgtgcctactgcctttgtgtgcaccaagtgtgggaagaccttcacccgc
aggaacaccatggccagacatgcggagaactgtaacggggatcctgtggaaggagagaac
ggaacaccagccaagaaaggacgaggtgggaggaagaagaagatgcgctcccggaaggat
gatgatgacgatgaggatgacagtgaggacaacattgaacacgaactggatgatattgat
gaggaggatgaggaagcggaggcagcattgctggaggaagaggaggaagatgaggagatg
gagttggaccaggctccgccaaccaagcctatccctgcacccttggagccgcccgtaaaa
aggaaacgtggcagaccccctaagaacgctcccaaagcctccccacctgccaaagtcagc
aaggcttcccccaagggcaagtctgctgcagctgcagccatcatccaggtggaggatgaa
aacacaggggccatagagaacatcatagtcaagaaagagccggaggcggagcaggctgcc
gtggaggtgctggtggagcattcagaagagcctgtggtggagaccgtggaggtgcctgta
gcagaggctgcccccaacggagacctcacccctgagatgatcctcagcatgatggaccgg
tga
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