Esox lucius (northern pike): 105018485
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Entry
105018485 CDS
T04894
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
els01001
]
105018485
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
els04121
]
105018485
Enzymes [BR:
els01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105018485
Protein kinases [BR:
els01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
105018485
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105018485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
Bromodomain
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
PHD-1st_NSD
zf-C3HC4_2
zf-C3HC4
PML_CC
Pox_I1
Motif
Other DBs
NCBI-GeneID:
105018485
NCBI-ProteinID:
XP_019912346
LinkDB
All DBs
Position
LG19:complement(31952915..31971578)
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AA seq
1055 aa
AA seq
DB search
MMDEGSQILESEDAVIIVENEAEPVQEEITNVRPATLNFLDTCPVCQLNFHSREPKLLPC
LHSFCKKCLPSPSRNLAMPDTNSQVDSATKPLNVIRCPVCRQECMEVDVMENFFVRDSVE
APSSTVERPIQLCMSCDDSAEATGFCVDCVEFMCGTCVEAHQRVKFTKDHIIRQKEDMPQ
EAVGIFTQRPVFCDIHKQEPLKLFCETCDLPTCRDCQLLKHKDHNYQFLEDAYKNHKHHM
EDMTRQLQEKKKIIEDVSNSINNGLLQVDENRISVHNDIKKSICSLILEINRKGKILVNQ
LEGLTKDHESGLKKQKEDIGYLSRHLDHVINFTKWATARSGGTALLYCKRLVGPSPMFYL
SPYPLAPRFSILKAWSPCRNIDEIQNICFVFFQSFSKLLITSLLLQILFQIGNLLRAKCN
TSFIPQSTVRFQCRSGFWASNFDLGSLVVENVPGHQLGGFQGIPHQLPHPVQGPPGSPIS
QPPGHSQPRLAPHNHNTLAQLQMQVEKLAQQPHWQPQPQPPPWAWYQSMRLQRPPTGPLQ
GSSPSQTLPSMHQQGRRFMAPPANHLSPTSTLPSPGYPPQAVQSLRGLVSSSSYSLKHMD
VFNPTPHFSHNAPLPSNGSFDSPHSREQQMESAYQNKHPGGPIQIIRPNFPQTLPASLPY
RTAQGQPHAGLTATSCQEKPGTVSWKPPEMQKQANGAGGSAAKRRRRSSPGPIIVIKDEP
EDDISCVQGNLRPNLPDSTGVQGQTSQQDGGEKQAQYSPHGPGDKAHTPPEPPGPSVDQS
QAQTPQQNLVRAEKRPGKGPDPEEDPNEDWCAVCQNGGELLCCDKCPKVFHLSCHVPTLL
RLPSGEWFCSFCRNLSVPEVVYDCDISRLEPRTVKKERDSEGGFCPVDKRKCERLLLRMY
CSELSADFQEARPPLILPENQETTTTPMDLSIVKSKLESKQSPCYCSPAEFVSDIRLIFR
NCAAFNEADTEVATAGRKLERFFEEQLKILYPQRTFPEVKSEIISPVTTPVSPQHPKASD
EESSQHAKRQRRCSESQDVCSGTPALSSPKGEEAH
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaaggttcacagatacttgagtccgaggatgctgtcattattgtggagaac
gaagcagaaccagttcaggaggagatcaccaatgtgcggccagccaccttgaattttctg
gacacctgtcccgtgtgccaattgaactttcacagtcgcgaacccaaacttttgccatgt
ctgcactctttctgtaagaagtgcttgccatcaccttcgaggaatttggctatgcctgac
acgaactcgcaggttgacagcgcaacgaaaccactgaatgtgatccgatgtccggtgtgc
agacaagagtgcatggaggtggacgtaatggagaacttctttgtgagggactcagtggaa
gctcccagtagcactgtcgagaggcctatacagctgtgtatgagctgtgatgatagtgct
gaggccactgggttctgtgtggactgtgtggagtttatgtgcggcacctgcgtagaggct
caccagagggtaaagttcaccaaagaccacatcatcagacagaaggaagacatgcctcaa
gaagctgttggtattttcactcagaggccagtgttctgcgacatccacaaacaggagcca
ctgaagctgttctgtgaaacctgtgatctgcccacctgccgagattgccagctacttaag
cacaaggaccacaactaccagtttctggaggatgcttataagaatcataaacatcacatg
gaggatatgactcgtcagcttcaggagaaaaagaagataattgaagatgtgtcaaattcc
ataaacaatggactccttcaagtggatgagaaccgcatatcagttcacaatgacatcaag
aagtcaatatgcagtttgatactagagatcaacagaaaaggaaagattctagtcaatcag
cttgagggcctgacaaaggatcacgaaagtggcctgaagaagcagaaggaggatattggc
tatctgtccagacatctggaccatgtgatcaacttcacaaaatgggctacagctaggagc
ggtggaacagctctcctttactgtaaacgtttggtagggccatctccaatgttttacctc
agcccctatccactggctcctaggttttctatccttaaagcctggagcccatgtcgtaac
attgatgaaattcagaacatatgctttgttttttttcagagtttttccaaattattaata
acgtcccttctgttgcagatcctgtttcagattggaaacctcctgcgggctaaatgcaat
acatcgtttattccacagagcactgtgcgtttccagtgtcgatctggtttttgggcctca
aacttcgatctgggctctttagtggtggagaacgtcccaggccaccagctgggtggcttt
cagggcatccctcatcaactcccccatcctgtgcagggccctccaggctcccccatcagc
cagcccccagggcactcccagccccgcctggccccccacaaccacaacaccctggcccag
ctccagatgcaggtggagaaactagcccagcaaccccactggcagcctcagccccagccc
ccaccctgggcctggtaccagagtatgcggctccagagaccccctacagggcctctccag
ggtagctctccctcccagactctcccttccatgcaccagcagggcagaaggttcatggcc
ccgcctgccaaccacctcagtcccaccagcaccctgccaagccctggatatccgccccag
gctgtccaatcactgagaggtctggtgagcagctccagctactcactcaaacacatggac
gtattcaacccaacgcctcacttctcccacaatgcaccactgcctagcaacggcagcttt
gactctcctcactcgagggagcagcagatggagtctgcatatcagaacaagcatcctgga
ggtcctatccaaataataagaccaaacttccctcagaccctaccagcgtccctcccatat
agaactgcacaaggacaaccgcatgcaggactaactgctacatcctgtcaggagaaacct
gggactgtttcctggaaacccccagagatgcagaagcaggcgaatggagccgggggatca
gctgccaagaggagacggaggtcatcgcctggacccatcattgtcatcaaagatgagcca
gaggatgacatcagctgtgtgcagggtaaccttcgacccaaccttccagacagcaccggg
gtccagggccaaaccagtcagcaagatggaggggagaaacaagcccagtattctcctcat
ggcccgggggataaagcccacactccaccagagcctccggggccttcagtagaccaaagc
caggcccagaccccacagcagaaccttgtgcgggcagagaagcggcccggcaagggcccg
gatccagaagaggaccctaatgaggactggtgtgctgtgtgtcagaatggaggcgagctg
ctgtgttgtgacaagtgtcccaaagtgttccacctctcctgccacgtccccaccctgctc
agattacccagtggagagtggttctgctcgttctgtcgtaacctgtcagtgcctgaagtg
gtgtatgactgtgacatcagcagactagaacccagaactgtgaagaaggagcgagactct
gaagggggattctgtcctgtggacaaaaggaaatgtgaaaggctcttgctgaggatgtac
tgcagtgagctcagtgctgactttcaggaggctaggccacccttgatattgccggagaat
caagagaccacaacgacgccaatggacctgtccattgtgaaaagcaagctggagtccaaa
cagagcccttgctactgcagcccagctgaatttgtttcagacatccgactcatcttccgg
aactgtgcagcgttcaacgaggctgacacagaggttgccactgccgggagaaaactggag
aggttctttgaggagcagctgaagatcctgtaccctcaacggacttttccagaggtcaag
tctgagatcatcagtcctgtgacgactcccgtctcacctcagcatcccaaagcatctgat
gaggaaagctcccagcatgcaaagcgtcagcgcaggtgctccgaaagccaggatgtatgt
agcggtactcctgctctaagctcaccaaagggagaagaggcccactaa
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