Esox lucius (northern pike): 105018509
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Entry
105018509 CDS
T04894
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
els
Esox lucius (northern pike)
Pathway
els03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105018509 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105018509 (sf3b3)
03041 Spliceosome [BR:
els03041
]
105018509 (sf3b3)
03036 Chromosome and associated proteins [BR:
els03036
]
105018509 (sf3b3)
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105018509 (sf3b3)
Spliceosome [BR:
els03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
105018509 (sf3b3)
Complex B
105018509 (sf3b3)
Complex C
U2 SnRNP specific factors
105018509 (sf3b3)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
105018509 (sf3b3)
TFTC complex
105018509 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
105018509
NCBI-ProteinID:
XP_028971030
LinkDB
All DBs
Position
LG19:26470132..26494717
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGITHAIHGNFSGTKMQEIVVSRGKIIELLRPDANTGKVHTLLTMEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPKSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKEDELGVKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPETNNLILIESDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGSGQWASLVRLVNPIQGSTLDLVQLEQNEAAFSVAVCRFASGG
DDWYVLVGVARDMILNPRSVGGGFIYTYRLGGGGDKLEFMHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVTDVQESLFWVRYKRNENQ
LIIFADDTHPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtataacctgacactgcagcgtgccactggcatcacccatgcaattcatggg
aacttctcaggaaccaagatgcaggagattgtagtgtccagagggaaaataattgagttg
ctgcgtccagatgccaacaccgggaaggttcacaccctgctgactatggaggtgtttggg
atcatccgctccctgatggccttcaggctgacaggagggactaaagactacattgtggtg
ggcagtgactcagggcgcatcgtgatcctggagtaccacccttccaagaacatgtttgag
aagattcaccaagagaccttcggcaagagtggatgtcgccgcatcgtccctggacagttc
ctcgccgtagaccccaagggcagggcagtcatgataggtgccattgagaagcagaagctg
gtgtacatcctgaacagagatgcagcagctcgtctcaccatctcctctcctctggaggca
cacaaggccaacacactggtctaccacgttgtaggagtggacgtgggttttgagaacccc
atgttcgcctgcttggagatggactacgaggaagccgacaacgacccgactggtgaggct
gccgccaacacccagcagacgctgaccttctatgagctggacctgggtctgaaccatgtg
gtgcggaagtacagcgaggccctggaggagcatggcaacttcctgatcacagttcctgga
ggctctgatgggcccagcggagttctcatctgttcagagaattacatcacttacaaaaac
tttggagatcaaccggacattcgctgtcccatcccgcgcagaaggaatgacctagatgac
ccagaacgaggcatgatcttcgtctgctcagccacccacaagaccaagtccatgttcttc
ttcctggcccagactgagcagggggacatcttcaaggtcacgctggagactgatgaggag
atggttacggagatcaggatgaagtactttgacaccatccctgtggccacagccatgtgt
gtgctgaagactggcttcctgtttgtgtcctctgagtttggcaaccattacctgtaccag
atagcccacctgggagatgatgatgaggagccagaattctcctctgccatgcccctggag
gaaggagatactttcttcttccaaccgcgccccctcaagaacctggtgctggtggatgag
caggagaacctttcccccatcatgtcctgtcagattgctgacctggccaatgaagacaca
cctcagttgtatgtggcctgtggccggggacccaaatccaccctccgagtcctccgacac
ggcctggaggtgtcagagatggctgtgtctgagctgcccggaaaccccaatgctgtgtgg
actgtgcgcagacacattgaagatgagtttgacgcttacatcatcgtgtctttcgtcaac
gccaccctggttctgtctatcggcgagactgtggaggaggtgacagattctggctttctg
ggaaccacgcccaccctctcctgttctctgctcggggaagatgccctggttcaggtttat
cctgatgggatccgtcacatccgcgccgacaagcgtgtcaatgagtggaagaccccgggg
aagaagaccattgtgcgctgtgctgtcaaccaaaggcaggtggtcatcgctctgaccgga
ggggagctggtctactttgagatggacccctcgggccagctgaatgagtacacggagagg
aaggagatgtctgctgacgtggtgtgtatgagcttggccaatgtcccacctggagagcag
cgctcccgcttcctggccgtgggcctcgtggacaacactgttcgcatcatctccctggac
ccgtcggactgtctccagcctctcagtatgcaggccctgcccgcccagccagagtctctc
tgtatagtggagatgggaggagtggagaaggaagacgagctgggagtgaagggcaccatc
ggcttcctctacctcaacatcggactgcagaatggtgtgttgctccggacggtgctggat
ccggtgaccggagacctgtctgacactcgtactcggtacctggggtcgcgacctgtcaag
ctcttccgtgtcaggatgcagggacaggaagctgttttggccatgtctagtcgctcctgg
ctgagttattcctaccagtctcgcttccacctgacgcccctgtcctatgagactctggag
tacgcctctggctttgcctctgaacagtgtcctgagggcattgtagccatctccactaac
accctgaggattctggcccttgagaagctgggtgcagtgttcaatcaggtggctttccca
ctgcagtacacacctcgcaagtttgtcatccacccagagaccaacaacctgatcctcata
gagagtgatcacaatgcatacacagaggccaccaaggcccagaggaagcagcagatggcg
gaggagatggttgaggcagctggcgaggatgaaagggagctggcagcagagatggcagcg
gcgttcctcaacgagaacctgccagaggccatcttcggggcccccaaagccggttctggc
cagtgggcctctctggtgcgtctggtcaaccccatccaaggcagcactctggacctggtc
cagcttgagcagaacgaggctgccttcagtgtggctgtgtgtcggtttgctagcggaggt
gatgactggtatgtgctggtgggggtggctagggatatgatcctcaacccccgctctgtt
ggaggaggttttatctacacctatcggctgggagggggaggggacaagctggagtttatg
cacaagactccggtggaggatgttcccctggccattgccccgttccagggccgtgtgcta
gtaggtgttggaaaactgctacgaatctatgacctgggcaagaagaagctgctccggaag
tgtgagaataagcatgttcccaaccttgtaactggcatccataccattggccaacgggtc
atagtgactgacgtacaggagagtctgttctgggtgcgctacaagcgcaacgagaatcag
ctgatcatcttcgccgacgacacccaccctcgctgggtcaccactgcctgtttgctggac
tacgacaccatggcttcagctgacaagtttggcaacatcagcattgtgcgccttcccccc
aacaccagtgacgatgtggatgaggacccaactgggaacaaggcattgtgggataggggt
ctgctgaacggtgcctcacagaaggctgaagtgatcatgaactaccacattggagagacg
gtcctgtcactgcagaagaccaccctgatccccggaggctctgagtctctagtttacacc
actctgtctggtggcatcggcatcctggtgccattcacctcccacgaggaccatgacttc
ttccagcacttagagatgcacatgcgctcagaattcccccctttgtgcggcagggaccac
ctcagcttccgctcatactacttccctgtaaagaatgtgatagatggagatctatgtgag
cagttcaactccatggacccccataagcagaagagtgttgccgaggagctggaccgtaca
ccccctgaggtgtcaaagaaactggaggacatccgcacacgctatgccttctaa
DBGET
integrated database retrieval system
