Esox lucius (northern pike): 105018563
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Entry
105018563 CDS
T04894
Symbol
fanca
Name
(RefSeq) Fanconi anemia group A protein isoform X1
KO
K10888
fanconi anemia group A protein
Organism
els
Esox lucius (northern pike)
Pathway
els03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105018563 (fanca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
els03400
]
105018563 (fanca)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
105018563 (fanca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_A_N
FANCA_arcN
FANCA_helical
FANCA_CTD
Motif
Other DBs
NCBI-GeneID:
105018563
NCBI-ProteinID:
XP_028971055
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All DBs
Position
LG19:complement(28406519..28424056)
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AA seq
1450 aa
AA seq
DB search
MSLGTSSVCPTQKRTLSCLLAGRVGKRPRQVNAEELREAAVQLLNRHQNLSDLFLEVGSL
GPCNLICQGKSAQKELSIRSPGAVFLVSELRKKAAELELPVAAISVKMVLERLLDLTSNI
KGDREHVLLNSAQRAQLFVLFQSTRELLSLGAFCSKLFWQEYWRDQKQPVLEVVYHLHTQ
NILSLDHVLERNGARLWLVSELKALCGWTASENDDGDVVRQQVLSTVVTALVQAGFEGTQ
DSAVPTSRKHSQVCCLVLDDMLSWVLDTLGSQQLLQSGETAAALWVPMFDASLCGVSVSP
DALRRFFTHSLTHTLTYRPRLKVSDAVATQREWGFAKTCPLLTTLFRKLAVVFEVQELLS
HLQQVLETHEVNWQHVLSFVSTLLVYNPHTQPILKELLSRLLSSAFEVYDLENMITAFLL
ARQGALEGPGVFPSYSEWFKMAFGGANSCHGNSKKSLVFLLKFMSDLVPFEPPQYLKVHI
LHPPYVATKHRALLKEYVSLAKTRLADLKVSVEEMGLYEDVSGAGASVQPRSQALQDVER
AVSLFDSTGRISATVMEASIFRRPYFLNRFLPALLTPRVLPVKPDARMNFIDSLKIAEKI
PAALYSSYVESCQRERRRHHDGKGHSVVNDEDPLEVLQVQLQDLRAQLTEVGDGEVCAQL
ARISHTLSIVFPERAEELVGQPIICLHVDDPTSPELHTKVVNMILRSFCQSLLDTSRISP
PNKQSPWAAQFVNSLLGRRKLPAAILHRMWDLLHNQGASLSAAHVLGLAAFAVHLHASQA
QCPMVQLSPTLLSGPLSGPEALTAALSCTTQTDMLFCIRFCVAALCYGLCLSESACEQRL
QYVPCGLYKKLLYLIPRLIPDARTLPIEVNGESEYVGPDRQVEGDHWLWKSVTDSDTTWR
KSAWVLWSHAPFRLLVKLSEYQLSFSEWLAAELRVQRSEDALSDPERQEYQQWACQQLYL
PSPEDQGGCGGDVRSACSHILNAIVDQQNGAQTQENNVRPLQMGTCLPDILCRLQEMVYE
MELTSRSQGTKDEQGHFLLDLISRRCSVISDLSRTSGELSFQQTLQTWNRVILSLPAAML
VTVKTDGGKRTLDCGTLMEHVNQYQRNVCTPSGLLPYQLTAHCLTAVLMAGVSCSCPSGE
VNKAMSSISRHCPLLLVSAGRWWGRLSPVVGSLWRRLTGGEPLPRQLSVLADCHLWACSL
KDGMSRPAPCGPPLLLAACLHSVWDGRGSGQVVRISLDMFGQQMEENRQLLVFLLFFCVT
DLLTAFLTPQEVKGLQRTHELCKDILTVLVDSADWLLLFKTPGSVFPVLEQGLYQPAVMV
TSDQHTRLMPLAFYSLVPHLNCEVLERTVKAPGFLHTAVFCYTSLMKLFMDGQSPCPVTE
LPTDQMDPSKILTRAQQVLLKTISLTSPSSVTQCQLHQLETLCGHLDPEVTAALVSHLSA
SSLSPELDFL
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggggacgtcaagtgtgtgtcccactcagaaaagaacactctcgtgtcttctt
gcagggcgtgttgggaagagaccaaggcaggtgaatgcagaggagctgcgggaggcagca
gtccagctgctaaacagacaccagaacctctctgatctttttctggaggttgggagtctg
ggcccttgcaatttaatatgccaagggaaatctgcacagaaagaattgtccattagaagt
cctggggctgtgtttcttgttagtgagttgaggaagaaggctgcggagctggagcttcct
gtggcagccatatctgtgaagatggtgctggagagactgttggacctgaccagcaatatc
aagggggacagagagcacgtcctgctcaactctgctcaaagggcccagctctttgttctg
ttccagtcaacccgtgagctcctttctctcggagccttctgctctaaactcttctggcag
gagtactggagggatcagaagcagcccgtgctggaggtggtgtaccatttacacactcag
aatatcctcagtctggaccacgtgttggaaaggaatggggcaaggctctggttggtgtct
gagttgaaggctctgtgtggttggacggcttctgagaatgatgatggagatgtggtccgt
cagcaggttctgtctactgtggtgacagcgctggtacaagctggttttgaagggacccag
gactcggccgtgccaacgtccaggaagcattcccaggtgtgctgcttagttctggatgac
atgctctcctgggtcctggatactttgggtagccagcagctcctgcagtctggtgaaacc
gctgcggcgttatgggtgccgatgtttgacgcttccttgtgtggtgtctccgtctcacct
gacgcactgcgccgtttcttcacccactctctcacccacactctcacttacagacccaga
ctcaaagtatctgatgccgttgccacgcaaagagagtggggcttcgctaaaacctgtccg
ctgttgaccaccttgtttcgtaagttggcagttgtcttcgaggtacaggagcttctctct
cacctgcagcaggtactggagactcatgaggtgaactggcagcatgtgctctcctttgtc
tccacactgctggtgtacaacccacacacccaacctattctgaaagagctgttgtccagg
ctccttagttcagcattcgaggtgtatgacttggagaacatgatcacggccttcctcctg
gcccgccaaggagcgctcgagggcccgggcgttttcccatcctacagtgagtggtttaag
atggcttttggtggtgccaacagttgccatggcaacagtaagaaatctttggtgttcctg
ctgaagttcatgtcggacctggtgccctttgagcccccacagtacctgaaggtccacatc
ctccatccaccctatgtcgccacgaaacaccgggccctactgaaggagtacgtgtccctg
gccaagaccagactagctgacctgaaggtctctgtggaggagatgggtctttatgaagac
gtctctggagcaggagcctcagtgcagccgcggtctcaggcgcttcaggatgtggaaaga
gcggtgtcgttgtttgacagcacaggaaggatatctgccacagtcatggaggccagcatt
ttcagaaggccttatttcctgaaccgttttctccctgctctcctaaccccgcgtgtgctt
cctgtgaagcctgatgccaggatgaatttcatcgactcgctgaaaatagcagaaaagatc
ccagctgccctgtactcctcctacgtagagtcttgtcagagggagagacggaggcaccat
gacggtaaagggcactctgtggtgaatgatgaagatccactggaggttctacaggtccaa
ctacaggatcttagagcccagctgacagaggttggtgatggagaagtgtgtgcccagctg
gccaggatatcccacacactgagtatcgtgttccctgaacgtgctgaggaactggttggc
caaccaatcatttgtcttcatgtagatgatcctacttcccctgagctgcacactaaagtg
gtcaacatgattctaaggagcttctgccagagtcttttggacacctccagaataagtcca
ccgaataaacagagcccctgggcggcccagttcgtcaacagtctgctgggacgtagaaag
ctgcccgctgccatcctgcatcgcatgtgggatctactccacaaccagggggcttcactg
agtgctgctcatgttcttggactggcagcgtttgctgtgcacctccatgcctcccaggcc
caatgtcccatggttcagttgtccccaaccctgctgtccggccctctgtctggcccagag
gcactgaccgccgccctgtcctgcaccacccagaccgacatgctcttctgcatccggttc
tgtgtggcggccctgtgctacgggctctgcctgagtgagtcagcgtgtgaacagcggctg
cagtatgttccctgcggcctctataaaaagttgctgtacctaattcccagactaatacca
gatgctcggacgttgcccattgaagtgaatggggaatctgaatatgtggggccagacaga
caggttgaaggcgatcattggttgtggaagagtgttactgactccgatacgacctggagg
aagtctgcctgggtgctgtggagccatgcccccttccgtctcctggtcaaactctcagaa
taccagttgtccttttcagagtggctggcagctgaactccgggtgcagaggagtgaggat
gccctgtctgacccagagagacaggagtaccagcagtgggcgtgtcagcagctctacctc
ccgtctcctgaagaccaggggggctgtggaggagacgtgaggagcgcctgttcacacatt
ctgaatgctatcgtggaccagcagaatggcgctcagacccaggagaacaatgtcagacca
ttacagatgggcacatgtctcccagatatcctctgcagacttcaggagatggtttatgag
atggagctcaccagtcgctctcaggggactaaagatgagcagggacatttcctattggat
ctgatttcacgtagatgctctgtgatctctgatctttcgagaaccagtggtgagctgagc
tttcagcagaccctgcagacatggaacagggttatcctgtcactgcctgcagccatgttg
gttacggtgaagactgatggagggaagaggactctggactgtgggaccctcatggaacat
gtcaaccagtatcagaggaatgtctgcaccccaagcggactcctgccctaccagctaaca
gcacactgcctaaccgctgtgctcatggccggtgtgagctgttcctgtccgtcaggggaa
gtgaacaaggccatgtcctccatcagtcgccactgtcccctgctcctggtctctgccggg
cgctggtggggccgtctctcccctgtggtgggctctctctggcgtcgtctcactggggga
gaacccctgccccggcagctgagcgttctggctgactgtcacctctgggcctgcagttta
aaggacgggatgtcacgcccagccccctgtggtcctcccctgctcctggcagcctgtctg
cactccgtatgggacggccgtgggagtggccaggtcgtcaggataagcctggacatgttc
ggacaacagatggaggagaacagacagctgctggtgtttctcctgttcttctgtgtgacc
gacctgctcaccgctttcctcacaccccaggaggtgaagggcctacagagaactcacgaa
ctctgcaaagatatcctgaccgtccttgtggactctgctgattggctgctgctgttcaag
acacctggctctgtttttcctgtcctagaacaaggcttgtaccagccagcagtcatggta
acatcagatcaacacacaagactgatgcctttagcattttacagcttagtcccccatctt
aactgtgaggttttggagaggacagtgaaggccccagggttcctccacactgctgtcttc
tgctacacttccctcatgaagcttttcatggacggccagtctccctgtcctgtgacagag
ctcccaactgatcagatggacccctcaaagattctgacccgggctcagcaggtgctactg
aagaccatctctctgacctccccaagctcagtaactcaatgtcagttgcaccagctggag
acgttgtgtggtcacctggaccctgaggtgactgctgctctggtctctcacctcagtgct
tccagcctcagcccagagctggacttcttgtga
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integrated database retrieval system
