Esox lucius (northern pike): 105019221
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Entry
105019221 CDS
T04894
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13 isoform X1
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
els03009
]
105019221 (dcaf13)
04121 Ubiquitin system [BR:
els04121
]
105019221 (dcaf13)
Ribosome biogenesis [BR:
els03009
]
Eukaryotic type
90S particles
Other 90S particles
105019221 (dcaf13)
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105019221 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
eIF2A
Beta-prop_IFT140_1st
ANAPC4_WD40
KNTC1_N
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
105019221
NCBI-ProteinID:
XP_028971234
LinkDB
All DBs
Position
LG20:complement(27232981..27243552)
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AA seq
445 aa
AA seq
DB search
MKVKVLSRNPDDYVRETKLDIQRVPRNYDPSLHPFEVTREYTRALNATKLERVFAKPFLA
SLDGHRDGVNCMAKHPKSLSTILSGSCDGELKLWNLTKRECVRTLQAHEGFVRGVVVRFC
GSSFFTIGDDKNIKQWKMETPGYGEEEEPINTILGKSVFTSIDHHHKDAVFVTSGQQVDI
WDEQRTSPIRSFSWGVDSINCVRFNPVETELLASCASDRSIVLYDMREAAPLKKVIMTMR
SNTLCWNPMEAYHFTCCNEDYNLYTYDMRYLDKPYTVHMDHVSAVLDVDYSPTGQEFVSA
SFDKSIRIFPKDGGHSREVYHTKRMQHVICIKWSSDNKYILSGSDEMNIRLWKANAAEKL
GMLAPREKAAVNYNQKLKEKFQHHPQIRRIARHRHLPKAVYSQVKEIRIMKEARSRKERN
VRKHAKPGSMPVVTEKEKHVVTVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtgctttcccggaatcctgacgactatgtccgtgagacaaagttggat
atccaacgtgtaccaagaaattacgacccgtctctccatccgttcgaggtgacaagagaa
tatacacgcgccctaaatgccaccaagctggagcgggtgttcgctaagccattcctggct
tctctggatggccacagggatggggtaaactgcatggccaagcaccctaagagcctctct
acaatcctgtctggttcttgtgatggggagttgaagctttggaatctcaccaaacgtgag
tgtgtccgtactctccaggctcatgaaggctttgttaggggggtggtcgtccgcttctgt
ggctcctccttcttcacgattggtgatgacaagaatatcaaacagtggaaaatggagacc
cctggatatggagaggaagaggaacctatcaacactattcttgggaagtctgtgttcacc
agcattgaccaccaccataaggacgctgtgtttgtgacaagtggccagcaggtagacatc
tgggacgagcagcgcaccagtcccatccgctccttctcctggggtgtggacagcatcaac
tgcgttcgcttcaaccccgtcgagacggagcttcttgcaagttgtgcctctgacagaagt
attgtgctgtatgatatgagagaagctgcacctcttaaaaaggtcatcatgacaatgaga
agcaacactttgtgctggaatcccatggaagcatatcacttcacctgctgtaatgaagat
tacaatctgtatacgtatgatatgaggtacctagacaagccctacactgtgcacatggac
catgtctccgccgtgctggacgtggactactctccaacgggacaggagtttgtctctgcc
agcttcgacaagtccatccgcatcttccccaaagatggtggccatagcagggaggtgtac
cacaccaagcgcatgcagcatgtcatctgcatcaagtggtcgtcagacaacaagtacatc
ctgagtggttcagatgagatgaacatcagactatggaaggccaatgccgctgagaagctg
ggaatgctagcacccagggagaaggcagctgtgaactacaaccagaagctgaaggagaag
ttccagcaccacccgcagattcgccgcattgcgcgccaccgtcacctgcccaaagctgtc
tacagccaggtcaaggagatacgcatcatgaaggaggctcgcagcaggaaggagaggaac
gtacgtaagcacgccaagcccggctccatgcccgtggtgacggagaaagaaaaacatgtg
gtcactgtggtgaaatag
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