Esox lucius (northern pike): 105019264
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Entry
105019264 CDS
T04894
Symbol
prdm1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105019264 (prdm1)
Transcription factors [BR:
els03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
105019264 (prdm1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
105019264
NCBI-ProteinID:
XP_010883607
UniProt:
A0AAY5KYJ0
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All DBs
Position
LG20:complement(30279729..30296553)
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AA seq
826 aa
AA seq
DB search
MCGWDQSFLASSHSSAMLTTEGAHTMEHDHTKQDTETQMDMGSKMATNRDPNMEEADMMR
WTEAEFEEKCTYIVKDTPREAGTESEGLTRAEASLPRNLTFKHPAGSTEVIGVASREYIP
KGTRFGPLVGQNYTTDSVPRDANRKYFWRIYSEGNFHHFVDGLDEDRSNWMRYVNPAHSA
GEQNLAACQNGMNIYFYTVRAILPGTELLVWYCPEFAHRLHYPSYGDLMMQKLKQSLLEA
KQHVSEERVSSSNVSVKREHSVSSILRGPTTKREPSRPQATRPRCADSPDRPLYPRALYP
PLRPHPHLTEEFLSLKTSTMQFGYPAIRSPGNQSSATPSPSARSSPESSPQGSPAGPQPT
PPSSIYSRGLGPFPGYSPPAASLSSPFYPPGSHYSPYLLPHHYPLHGGGMPAVGSMFTGM
YPRYNSLLLPHLPLLPGETGRRFLLPDSTHHSVSAHRDFLLPAPTSAFSAATSLKDKASP
HHPYPSHAHPHPHGQPHAPTSGSPTAGTAPPSERVPTKPTSALLSSASGRPEDEAVNLSK
MKRSGGSTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFKCSTCS
KGFTQLAHLQKHFLVHTGEKPHECSVCHKRFSSTSNLKTHLRLHSGEKPYSCKLCPAKFT
QFVHLKLHKRLHSRERPHKCPHCHRHYIHLCSLRLHLKGYCLTAVTSSGGPTPSSSTQEE
LQRINEEIERFDMSDHAERLDQLQGGVEVEAVLEKQVLGMLWREMDLKTSSYHHHHHKGG
SGEPQATGYSLYDSVNKTSVIKLRRSSPLPLLPSNVTVKEESEEHA
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctgggaccaaagcttcttggcttcctctcatagctcggccatgttgactact
gagggggcccacaccatggagcacgatcacaccaaacaggatacagaaacccagatggac
atgggatccaaaatggccaccaacagggaccctaacatggaggaggcggacatgatgagg
tggacggaggcagagtttgaggagaagtgtacgtacatcgtcaaggatacgcctcgggag
gcggggacagagagcgagggtttaacaagagccgaagcgtcgctgccacggaacctgacc
ttcaaacacccggctggctccacagaggtgattggagtggccagcagagagtacatcccc
aaagggacacgctttggccccctagtgggccaaaactacactacagacagcgtccccaga
gacgccaacaggaaatacttctggaggatctactcggagggcaacttccaccactttgtg
gacggcctggatgaggaccgctctaactggatgcgctacgtcaacccggcccactcagcg
ggggaacagaacctggcggcgtgccagaatggcatgaacatctacttctacacggtgcgg
gccatcctccctggcactgagctgttggtgtggtactgccccgaattcgcccaccgtctc
cactacccgtcctatggagatctcatgatgcagaaactcaagcagtctctgctggaagcc
aagcagcacgtcagtgaggagcgtgtcagtagcagcaatgtctctgtcaagagagaacac
agcgtctcctccattctcaggggccccacaaccaagcgggagcccagccggccccaggcc
acacgaccccgctgtgctgacagccccgaccggcccctgtacccccgcgccctgtacccc
ccactccgcccccaccctcatctcactgaagagttcttaagtcttaagaccagcaccatg
cagtttggttacccagcaatccgatcaccaggcaaccagtcgtcagcaaccccgagtcct
tctgccaggagcagtccagagagcagcccccagggtagcccggcaggtccccaacccaca
cccccgtcttccatttactcccgaggtttgggtcctttcccaggctactctcccccagct
gcctccctttcctcacccttctatccccctggttcccactattcaccctacctgttgccc
caccactacccactccatgggggcggcatgcctgctgtgggcagcatgttcaccgggatg
tatcctcgctacaacagcctgctgctcccccacctgcctctgctgcctggggagacgggg
agaaggttcttactgcctgactccacccaccactcagtctccgctcacagggacttcctc
ctccccgcccccaccagtgccttctcagccgccacctccctcaaggacaaggccagcccg
catcacccttatcctagccacgcccacccacacccccacgggcagccccatgcgcccacc
agtggctcccctacagcgggcacggcgccccctagcgagcgggtgcccaccaagcccaca
tcagccctgctgagcagcgccagcggccggccggaggacgaagctgtcaacctgagcaaa
atgaagcgcagtggcggctctacgggctacaagaccctgccttatccactgaaaaagcag
aacggcaagatcaaatatgagtgtaatgtctgcagcaagacctttgggcagctttctaac
ctcaaggtgcacttacgggtccacagtggtgagcggccctttaagtgttcgacgtgcagt
aagggcttcacccagctggctcacctgcagaagcacttcctggttcacactggagagaag
ccccacgagtgctcggtgtgccacaagcgcttcagcagcaccagcaacctgaagacccac
ttgcgcctgcactccggtgagaagccatactcgtgcaagctctgccctgccaagttcacc
cagttcgtccaccttaagctgcacaagcgccttcactcccgcgagcggccgcacaagtgc
ccccactgtcaccgccactacattcacctgtgtagcctgcggctccatctcaagggctac
tgcttgactgccgttacctcctcaggaggcccgacccccagctcttccacacaggaagag
ctccagcgcatcaatgaggagattgagcgctttgacatgagcgaccatgctgagaggttg
gaccagctccagggaggggtcgaggttgaggctgtgctggagaagcaagtcctggggatg
ttgtggagggagatggaccttaagacctccagctaccaccaccaccaccacaaggggggc
tctggtgagccccaggctacaggttacagcctgtacgattccgtcaacaagacatctgtt
atcaagctgcgcagaagcagcccacttcccctgcttccctccaatgttacagtcaaagag
gagtcagaggaacatgcttga
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