Esox lucius (northern pike): 105019277
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Entry
105019277 CDS
T04894
Symbol
smg5
Name
(RefSeq) protein SMG5 isoform X1
KO
K11125
protein SMG5
Organism
els
Esox lucius (northern pike)
Pathway
els03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105019277 (smg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105019277 (smg5)
03032 DNA replication proteins [BR:
els03032
]
105019277 (smg5)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105019277 (smg5)
mRNA cycle factors
Common to processing body (P body) and stress granule
105019277 (smg5)
DNA replication proteins [BR:
els03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
105019277 (smg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
105019277
NCBI-ProteinID:
XP_010883636
LinkDB
All DBs
Position
LG20:complement(32484261..32505129)
Genome browser
AA seq
1114 aa
AA seq
DB search
MSGPGQDSEPEAKVLLIKRLYRAVVESVHKLDVIIGSKSSYREVFKPENISLRNKLRELC
VKLMFLHPVDYGRKAEELLWRKVYYEVIQVIKTNKKHIHSRSALECAYRTHLIAGVGFYQ
HLLLYIQSHYQLEMQDCIDWTHVTDPLIGRKKPVSATPKEMEWAQMACHRCLVYLGDLAR
YQNELAGVEAEQLAERFYHQALSVTPHVGMPFNQLGTLAGSKFYNVEATYYYLRCIQSET
PFEGAYGNLKRLFDKAAKMYHQVKKQELKKLSPSRQRSKDIKRLLVSFMYLQSLLQPKNS
LLETELTSLCQSVLEDFNLVLFYLPSPPHGHGASSPSEEEHEEHDSACALLPDALVFKMV
VTCLMVVHSLKRGGSKQYSASIAFMLALFSHLVNHVNIRLQAELEEGETQVPPLQMDNTD
DSESRDLSGLLTSEERPLQNGSLDRVDEKDDGGHRGPGAKKAGVGELKAEEDKQKQKQKK
KYARLSMLRRRRCAARTEDDSDLSEGFESDEEEEEDDEVVQRGRADSAGVASRTPLHPSA
LVKETKRERAPPTEEGIWGSGSEEDEEGGTAFDVETDSDMNSQESRSDLEDIDDSENTET
PPRGEQQLEEYDEEQANPREDRDGGTPPATNGPLHPNDPSISSNLQAMSSQLFQAKRCFR
LAPTFSNVLLRPHSSSTIPIPTDPEASSTTHSEETPPPPGEMSCDARPSTANGTNDNEVD
SDSEISVHSNQSVRSEKTLSERLEILTNQGLIQVVKVFVDWLRTNTDIIVMCAQSSQSLW
NRLSVLLNLLPDGSKMLEAELGLNTEVTEMLSGCEQPSLVQSLLLPEDLALHHLPALHLA
HRRLDYTRPRPALSPIQECVVRVCCIRSFGHFLTKLQCNVLHFNPEAGIFTSIRQSEEDN
LVQQAKAQFRMAEEEARRNRLMRDMAQLRLQLEVSQLEGSLQQQPKAQSSMSPYLVPDSA
ALCQHLNLLRQLASSGCFIIIIPRTVIDGLDHLKKENAGARDGIRFLESEFRKGNRYIRC
QKESGRSFERDKLKRQDIEAWHLYKMVDSCRQLTVSQSNGEEDTAGMVTILTGHSVEELC
SRSAPMKSAVQAVATAGMELKNMLEFYRQWKEIG
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgagtggacctggccaggatagcgagccagaggcaaaagtccttctcatcaagcggcta
tacagggctgtggttgagtcggttcacaagcttgatgtcatcattggtagcaagtcgtct
tacagggaggtcttcaagcctgaaaatatcagccttcgcaacaagttgagggagctgtgt
gtgaagctgatgtttctccaccctgtggattacggtcgcaaagctgaggagcttctgtgg
aggaaggtctactatgaggtcatccaggtcatcaagaccaacaagaagcacatccacagt
cgcagtgccctggagtgtgcctataggacgcacctgatagcaggtgtgggcttctaccag
catttactgctctacattcagtcccactaccaactggagatgcaggactgcatcgactgg
acccatgtcactgatcccctgatcggtcggaagaagccagtctcagctacccctaaggag
atggagtgggcccaaatggcttgccatcgctgccttgtgtacttgggagatctagcccgc
taccagaatgagttggccggggtggaggctgagcagttggcagagcgtttctaccatcag
gccctgtctgtcacaccacatgtaggaatgccttttaatcagttgggtacgttagcagga
agtaaattctacaatgtggaggccacctattactacctacgctgcatacagtcggagact
ccattcgagggggcctatggaaacttgaagcgtctgttcgataaagctgccaagatgtac
caccaggtgaagaaacaggagctgaagaagctctcgccctcacgacaaagatccaaagac
atcaagcgactcctggtgagcttcatgtacctgcagagtcttctgcagcccaagaacagt
ctgctggagacggagctgacttcactgtgccagtctgtgctggaggattttaacctggtt
ctgttctaccttccctcgccgccccacggccacggagcctcttcccccagcgaggaggag
catgaggagcatgactccgcctgtgccctcctccccgacgcactggtctttaagatggtg
gtcacctgcctcatggtggtgcacagcctcaagaggggagggtccaagcagtacagtgca
tccatagccttcatgctggccctgttctcccacctggtgaaccacgtcaacatccgcttg
caagctgagctggaggagggagagacccaggtgcccccgttgcagatggataacacagac
gactccgagtcgagagacctgtctggcttattgacctcggaggagaggcccctgcaaaac
ggctccctggaccgggtggatgagaaggatgacggggggcaccgtggccccggggccaaa
aaagcaggcgtcggcgagctgaaggcggaggaggataaacagaaacagaagcagaagaag
aagtacgcccgcctgtccatgctacgccgccggcgctgtgccgcccgcactgaagacgac
agcgacctgagcgagggctttgagagtgacgaagaggaggaggaggacgacgaagtggtg
cagaggggtcgtgccgactctgcaggcgtggcctctcggaccccgctccacccctccgca
ctagtgaaggagaccaagagagagagggcacccccgacggaggaggggatatgggggagc
ggctcagaggaagacgaggagggaggcacggccttcgatgtggagaccgactcggacatg
aacagccaggagtctcgctccgacctggaggatatagacgactctgagaacacagaaaca
cctcctcgaggggagcagcagctggaggaatatgacgaggaacaggccaatcccagggag
gacagggacgggggcacccctccggccactaacggtcccctccatcccaacgaccctagt
atcagcagtaacctccaggccatgtcgtcccagttgttccaagccaagcgctgcttccgc
ctggcacccaccttcagcaatgtgctgttgcgcccccacagctcctctactatccccata
cccaccgacccagaagcctcatcaaccacccactccgaggagacccctccccccccagga
gagatgtcctgtgacgccaggcctagcactgctaacggaaccaatgacaatgaggtggat
tccgattcagagatcagcgtgcacagcaaccaatcggtacgaagcgagaagactctttca
gagagactggagattctcaccaatcaggggctcatccaggtggtaaaagtgtttgtggac
tggcttcgaaccaacacagacattatcgtcatgtgtgcacagagttctcagagcctgtgg
aaccgcttgtctgtgctactcaacctgctacctgatgggagcaagatgctggaagcagag
ctgggtcttaatacggaggtgactgagatgctgagtgggtgtgaacagcccagcctggtc
cagtctctgctgctcccagaggacctggccctgcaccacctaccggccctgcacctggcc
caccgacgcctcgactacacccgccccagacctgccctcagccccatacaggagtgtgtg
gtgcgcgtctgctgcatccgcagctttggccacttccttaccaagcttcaatgcaacgtg
ctgcactttaacccagaggctggtatcttcaccagcatcagacagtcagaggaggacaac
ctggtgcaacaggccaaggcccagttccgcatggcagaggaggaagctcggcgaaaccgc
ctgatgagagacatggctcagctccgtctgcagttggaggtttctcagctagagggcagc
cttcagcagcagcccaaggcccagtcatccatgtctccataccttgtccccgactctgct
gccctctgccagcacctgaaccttctcagacaattggctagcagcggctgcttcatcatc
atcatcccccgcacagtaattgatggccttgaccacctgaagaaggagaatgctggagcg
agagatggcattcgcttcctggagtctgagtttcgcaaaggcaaccggtacatccgttgc
cagaaggagtccgggcggagttttgaaagagacaaactgaaacggcaggacattgaagcc
tggcatctgtataagatggtggacagctgtcgccagctgacagtctcccagagcaacgga
gaggaagacacggccggcatggtcactatcctcaccggtcactcagtggaggagttgtgt
tcccgctccgcgcccatgaagtctgctgtccaggccgtggccacggcgggcatggagctg
aagaacatgctggagttctaccgtcagtggaaggagatcggctga
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