Esox lucius (northern pike): 105019391
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Entry
105019391 CDS
T04894
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
els
Esox lucius (northern pike)
Pathway
els04140
Autophagy - animal
els04148
Efferocytosis
els05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105019391 (vps41)
04148 Efferocytosis
105019391 (vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105019391 (vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105019391 (vps41)
Membrane trafficking [BR:
els04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
105019391 (vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
zf_RING_Vps8_fungal
Beta-prop_RIG_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_HPS5
TPR_7
TPR_19
zf_RING_Vps8
Beta-prop_EML_2
Vps39_1
TPR_PEP5_VPS11
TPR_GEMI5
zf-C3H2C3
Beta-prop_IFT140_2nd
zf-rbx1
Helicase_PWI
zf-Vps39_C
Motif
Other DBs
NCBI-GeneID:
105019391
NCBI-ProteinID:
XP_010883849
LinkDB
All DBs
Position
LG21:24109625..24125822
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AA seq
854 aa
AA seq
DB search
MAEVEEKGRKPSEESTDESEEEDSEEEPKLKYERLANGVTEILQKDAASCMTVHDKFLAL
GTHFGKVFLLDIQGNVTQKFDISPVKINQISLDESGEHVGICSEDGKVQVFGLYTREGFH
ENFDCPIKVVALHPRFSSSNCKQFVTGGNKLLLYERNWLNRWKTSTLHEGEGTITNVQWR
ANLIAWANNVGVKIYDISTKQRITNVLRDNVSLRPDMYPCSLCWKDNTTLIVGWGSSIKI
CAVKERDHAEMRDLPSRYVEIVSAFETEFFISGLAPLADQLVTLYFVKETSDHMEEEFRA
RPRLDIIQPLAEGCEEISSDALTVRNFQENECRDYRLEHSEGESLFYIISPKDIVVAKER
DQDDHIDWLLDKKKYEEALMAAEISFKNIKRHEVQKIGMAYINHLVEKGDYDSAARKCQK
VLGKNMELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILHEFLKTDYEGFAMLI
REWPGELYNNMTVIQAVTDHLKKDPANGTLLTTLAELYTYDQRYDRALEIYLRLRHKDVY
QLIHKHNLFSAIEDKIVLLMDFDKEKAVDMLLDNEDKISMDRVVEELRDRPELLHIYLHK
LFKRDHHKGQKHHERQIGLYAEYDRPNLLPFLRDSIHCPLEKALEICQERYFVEETVFLL
SRMGNCRRALQMIMEELEDVDKAIEFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLQKNHRTQM
RGVRVDEENICESCHASILPSDMAQNFSVVVFHCRHMFHKECLPSPGTIPGVQFCNICSA
KRRGPGSGILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtagaggagaagggcaggaaaccaagtgaagagtctacagatgaatctgag
gaggaagacagtgaggaggagcctaagctgaagtatgagcgactggccaatggggtgaca
gagattcttcaaaaagatgctgccagctgtatgacagtccatgataagttcctcgcgctg
ggcacccactttgggaaggtcttccttctggacatccaaggaaacgtgacccagaagttt
gacattagtccggtgaagatcaatcagatcagtttggatgagagtggagaacatgtgggg
atctgctcagaggatggcaaggttcaagtgtttggactttacacgcgggagggcttccat
gagaactttgactgtcctatcaaagtggtggcgctgcacccgcgcttcagcagttcaaac
tgcaaacagtttgtaactggcggcaacaagctgcttctgtacgagaggaactggctgaac
cgctggaagacgtccactctgcacgagggggagggcaccatcactaacgtccaatggaga
gccaatctgattgcttgggccaataacgtgggagtgaaaatctacgacatcagcaccaag
cagcgaatcaccaacgtgctgcgggataacgtcagcctccggcctgacatgtacccctgc
agcctgtgctggaaagacaacaccacccttatagtcggctggggctcctccattaagatc
tgcgcggtgaaggagagggaccacgccgagatgagagaccttcctagccgctatgtggaa
atcgtgtccgcgtttgaaacggagttcttcattagtggcctggcacctctggccgaccag
ctggtcaccctgtattttgtgaaggagacctccgatcacatggaggaggagttccgagca
aggcctcgtctggacatcatccagcctctggctgagggctgtgaggagatctcatccgac
gccctgactgtccgtaatttccaggagaacgaatgtcgggactaccggcttgaacattcc
gagggagaatccctcttttacatcatcagtcccaaagacattgtggtggccaaagagcga
gaccaggatgaccacattgactggctactagacaaaaagaagtatgaggaagctctgatg
gctgccgagatcagtttcaagaacattaaacgccatgaagtccagaaaattgggatggcc
tacataaatcacctggtggagaagggggactatgactcggctgcaaggaagtgtcagaag
gtcctggggaaaaacatggaactctgggagaatgaggtgtacaggttcaaaaccattggg
cagttgaaggccatcagtcagtacttgcccagaggggacctgcgactcagaccggccatc
tacgagatgatcttgcatgagttccttaagacggactatgagggctttgccatgttgatc
cgtgagtggccaggcgagctgtacaataacatgactgtcatccaagccgtcactgaccac
ctcaagaaggacccggccaatggtaccctgctcacgacgctggccgaactttacacctac
gaccaacgctatgaccgggccctggagatataccttagactccggcataaagacgtttac
cagctgatccacaagcacaacctgttctccgccatagaagacaagattgtgctcctcatg
gactttgataaagagaaagctgtggatatgctcctggataacgaagacaagatatcgatg
gacagagtggttgaagaactccgagacaggcctgagctcctgcacatataccttcacaag
ttgttcaagagggaccaccacaagggtcagaagcaccacgagagacagattggtctgtat
gcagagtatgaccgtcccaacctcctgccatttctaagggacagcatccactgcccacta
gaaaaggctctggagatttgtcaggagaggtactttgtggaggagaccgtgttcctgctc
agcaggatggggaactgtcgacgggcccttcagatgatcatggaggaactggaggatgtg
gacaaggccattgagtttgcaaaggagcaggatgacgccgagctgtgggaggatctcatc
tcctattccatcgacaagcctcccttcatcaccggcctgctcaataacattggaacacat
gtggatcctatcttgctcatccaccgaataaaggagggcatggagattcctaacctcaga
gattctctggtcaaaatccttcaggactacaacctacagatattgctccgggaaggctgt
aagaagatcttagtggctgactcgctgtccctgcttcaaaagaaccacagaactcagatg
agaggggtcagagtggatgaagaaaacatatgcgaatcttgtcacgcttcgatattacca
tcagatatggcccagaacttcagtgtggtggttttccactgcagacacatgttccataag
gagtgtttaccctctccgggaacgattcctggggtccagttttgcaacatctgcagtgcg
aagcggagaggaccaggaagtgggatacttgagatgaagaagtaa
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integrated database retrieval system
