Esox lucius (northern pike): 105019428
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Entry
105019428 CDS
T04894
Name
(RefSeq) integrin beta-1 isoform X1
KO
K05719
integrin beta 1
Organism
els
Esox lucius (northern pike)
Pathway
els03271
Virion - Rotavirus
els04145
Phagosome
els04510
Focal adhesion
els04512
ECM-receptor interaction
els04514
Cell adhesion molecules
els04530
Tight junction
els04810
Regulation of actin cytoskeleton
els04820
Cytoskeleton in muscle cells
els05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
105019428
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105019428
04514 Cell adhesion molecules
105019428
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105019428
09144 Cellular community - eukaryotes
04510 Focal adhesion
105019428
04530 Tight junction
105019428
09142 Cell motility
04820 Cytoskeleton in muscle cells
105019428
04810 Regulation of actin cytoskeleton
105019428
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
105019428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105019428
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
els04147
]
105019428
04515 Cell adhesion molecules [BR:
els04515
]
105019428
04090 CD molecules [BR:
els04090
]
105019428
Membrane trafficking [BR:
els04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
105019428
Exosome [BR:
els04147
]
Exosomal proteins
Proteins found in most exosomes
105019428
Cell adhesion molecules [BR:
els04515
]
Integrins
Integrin beta subunits
105019428
CD molecules [BR:
els04090
]
Proteins
105019428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
105019428
NCBI-ProteinID:
XP_010883921
LinkDB
All DBs
Position
LG21:17765665..17802003
Genome browser
AA seq
802 aa
AA seq
DB search
MDLKLLLISLLFGIICYSSAQQEGNECIKANVKSCGECIQVGAKCGWCTDPEFLKQGEAT
STRCDELESLRKRGCGAAKVENPRGSQRVLKNTPVTNRNKGADKLKPEDITQIQPQKLTL
SLRSGEPQSFNLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTQLMLEMAKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGRKFNTLVGQQQI
SGNLDSPEGGFDAIMQVAVCGDDIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPDGVTITYQSRCKNGVIGEGEMGRKCSNISIG
DEVSFTISITTKQCPKMGKSETIKIKPLGFTEEVEIALNFICECDCHKDGIKNSEICHNG
NGTFECGACRCNEGRIGRQCECSTNEVTSEDLDKNCRKDNGTDICSNNGDCVCGTCECKK
RENPEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRVCICDTNWTGSACDCSLGTTTCL
ASNKQICNGRGTCECGTCKCTDPKFQGPTCEICPTCPGVCTEHKECVQCRAFGTGEKKDT
CERDCSYFNLIMVKHRNELPQPGQAFPLMHCKERDADDCWFYYTYAVNNNTEKEVHVVEK
PDCPEGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQEN
PIYKSPINKFQNPNYGRKAAAL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaaattacttctgatatctttgttgttcggaattatttgttacagcagtgct
caacaagaagggaatgagtgcatcaaggccaatgtcaagtcctgtggcgaatgtattcaa
gttggagctaaatgtggatggtgcacagacccagagtttctgaagcagggtgaggccact
tcaacccgctgtgatgagctagagtctctaaggaagagagggtgcggtgctgctaaggta
gaaaacccccggggaagccagagagttctgaagaacacccctgtgaccaaccgtaacaag
ggagcagacaaactcaaaccagaagacatcacacagatccagccccagaaactcaccctg
agcctcagatctggtgaaccccagtctttcaacctgaagttcaaacgagctgaggattac
cccattgacctttactacctgatggacttgtccttctccatgaaagacgatctggaaaat
gtaaagaacctgggaacacagttgatgttggagatggcaaagatcacgtccgacttccga
attggttttgggtcctttgttgagaagacagtgatgccttatatcagtaccaccccagcc
aagctgctgaatccctgtactggtgaccagaactgcaccagtcccttcagctataaaaac
gtcctgaagttgaccagcaatggaaggaagtttaacactctggtgggacaacagcagatc
tctggaaacctggactcgccagagggaggttttgatgcaatcatgcaagtggctgtctgt
ggtgatgacattggctggagaaatgtaactcgtctactggtgttctccactgatgccggc
ttccactttgctggagatgggaaactgggaggaattgttctgcctaatgatgggaaatgc
cacctggagaacaacatgtacacaatgagccactactatgactacccctcgatcgcccac
ctggttcagaaactaagtgacaacaacattcaaaccatctttgcagtcacagaggaattc
cagcctgtttacaaggagttaaagaatctcatccctaagtctgcggttggcacactctcc
gccaactccagcaatgttatcaacctcattatcgatgcctacaattctctttcctcagag
gtgattctggagaatagtaagctaccagatggagtgaccatcacataccaatcacgctgc
aagaacggagtgattggggagggagaaatgggtagaaaatgctccaacatctccattggg
gacgaggtatccttcaccattagcatcacgactaaacagtgtcccaagatgggcaaatca
gagaccatcaagatcaaacccctggggttcacagaggaggtggagattgctctgaacttc
atctgtgagtgtgactgtcacaaagatggaatcaaaaacagtgagatctgccacaacgga
aatggaacatttgaatgtggagcctgcaggtgtaatgagggccgtattggtagacagtgt
gaatgcagcaccaatgaggtgaccagtgaagacctggataagaactgccgtaaagacaac
ggtactgacatctgcagtaacaacggagactgtgtgtgtggaacctgtgagtgtaagaag
agagagaacccagaagaacgctacagcggaaagttctgcgagtgtgacaacttcaactgt
gaccgttccaataacaaactctgtggaggacatggtcgttgtgagtgcagagtgtgtatc
tgtgataccaactggacgggtagtgcctgtgattgttccctgggtaccaccacctgcctg
gcttccaacaaacagatatgtaacggtcgaggcacctgtgagtgtggcacctgcaaatgt
accgaccccaagttccagggccccacttgtgagatttgtcccacctgtccaggagtctgc
acagaacacaaggagtgtgttcaatgcagggcatttggtacaggggagaagaaggacacc
tgtgagagggactgtagctacttcaacctgattatggtgaagcacaggaacgagctccct
cagccgggacaggccttccccctgatgcactgcaaggaaagggacgcagacgactgctgg
ttctactacacctacgctgtgaacaacaacacagagaaggaggtgcatgtggtggaaaag
ccagactgccctgagggccctgacatcatccccatcgtggctggcgtggtggcgggcatc
gtgcttattggcctggccctgttgcttatctggaagctgctcatgattatccatgacagg
agggagttcgccaagtttgagaaggagaagatgaacgctaaatgggacacgcaagagaac
ccaatatacaagagccctattaataagttccagaatccaaactatggacgtaaagctgca
gctctttaa
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integrated database retrieval system