Esox lucius (northern pike): 105019578
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Entry
105019578 CDS
T04894
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
els
Esox lucius (northern pike)
Pathway
els04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105019578 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
els01009
]
105019578 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105019578 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
els03029
]
105019578 (rb1cc1)
Protein phosphatases and associated proteins [BR:
els01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105019578 (rb1cc1)
Membrane trafficking [BR:
els04131
]
Autophagy
Autophagosome formation proteins
ULK complex
105019578 (rb1cc1)
Mitochondrial biogenesis [BR:
els03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105019578 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
105019578
NCBI-ProteinID:
XP_010884169
UniProt:
A0A3P9AKH5
LinkDB
All DBs
Position
LG03:19964044..19979472
Genome browser
AA seq
1646 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVSDLKHAIQAKYKIATQHQVLVVNGGECMVGERRVC
SYSAGTDTNPIFLFNKEMILCDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLWKFDTAYINYQQ
DFEDIKLKLTKLGTAVSVMAKIPLLECLTRHSYRECLEKSCSTPDKDSDETEEEKSTDSV
LCPTPTATETQRSSTKLPVSFNAPGAESGETQDGSDMRDSSVLRAALQEADSPERANQPS
FNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLAECRDTIAKLDNQNMKAIK
GLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQLMIM
LTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELMERV
RVVDALSTVPQMYCLAVVEVVRRKIFIGHYREWACALVKDGKHLYETEKYKRETFGKLFR
KSFLRNRLFRGLDSWPPTSFCTRKPRKFDFELPDISLADLQYLRTCCPAEVQPFLRVPTL
CDFEPLHQHVEMLQQLVQAAQAASVDEMSQTITDLLSEQRVSCSQSAQRSTAAVTPLTPR
SDSTLGTTSTSSKTPPSLSLPAPPFQPFTGPLPGPGPTALEDLSPDSIDAQTFDFETIGH
PNMDPVLHQASSLDLDSLAESPESDFMSAVNEFVIENSPTPISDPTSPEMMVESLYSSVI
NAIDSKRMHDTTTLERENSKMAALKLSIEKYRSAAEESQTNLRCVKDDLYRFRGLVLKEQ
RDFGFSLKTMTIEVRTMVDAIRKREEEELRGQHQAMLLSLQQDHKKQLQALTEENQVNQN
IVKDVQRAILDLEGLLERKEKELTQLEAERERWTESESAHIQKARDLEQKLVAQAQEVQT
LAASRDTLSNQLEILHVEIEHGQQKIRQELEEAEQSHLQELEERMRQQHQAQLDSLAQEN
QVALERVATENKSKLMEVTDLHAAILTERDSRLRDLEARVAELADLRCKVEVELALKESE
MEELRLLYEEAKQGQQEADMGRATVVAETQSLSEQLALVSRQLLAKNEEYQTGLTELRTL
MRMEKDQCISELVNRHEEERNQLRSELTTLQQQAQDVEKSHNQQLQNLQRDLDLRIAALR
KDKEEQQGSFEEQEQHLRTVICDLQAENDLLAKRLEQDTQEARESLQMEEASNAALPAAF
KNLEQQKEEMEIRLLDKIRLLENELQKRQSSESEAGLSVVRVEIPGSEAAAPLSLDSALQ
ERLQQETASLRTQLDLLERRKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIINELTE
ELKKVTQQQEKDKGLIETLSEDRAIVMQEKKQLEEELNRLRSTALVSSAYYSPNPLALEP
PGATVRLGPGTEIEAGAGACSSEPFPDPDRLASVAAIREDDRVDTAVEASMVTVHDNILM
MSEEKQRILLLERTLHMKEEENKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIIL
DERHDNYVLFTVGPTLYFLHSESLTALDLKPDPMFTSASGASRRPWVLGKVMEKEYCQAK
KAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaagtcaacaatggaagcactcttacatttgacacagagttg
gctgttcaaacagtgtcggacctcaaacatgccatccaggcaaaatacaagattgcaacc
cagcatcaagtcctggttgtcaatggaggggagtgtatggttggagagaggagagtctgc
agctatagtgctggcactgacaccaaccctatattcctgttcaacaaagaaatgattttg
tgcgaccgggctccaactatccccaaaaccaccttctctatcgaaaatgagatggagctg
aaggtggaggagtcactaatgatgccagcagtctttcacaccgttgcctcaagaacacaa
cttgctgtggaaatgtttgaagttgccaagaaactttgctcattctgtgaacgcttggtt
cacgatgaacacctccaacatcaaggctgggctgctatcatggcaaacctggatgactgc
accttgtcataccagaagctgctgtggaaatttgacacggcatacattaattatcaacaa
gactttgaggatatcaaattgaaattgacaaaactggggacagcagtctcagtaatggcc
aaaatccctctgctggagtgtctgactcgccacagctatagagaatgcctggagaagtcc
tgctcgactccagacaaggactctgatgagacggaggaggagaagtccacagactcagtg
ctctgccccacccccactgccaccgaaacacagaggagctccaccaagctacctgtgtcg
ttcaatgcgccgggggcagaatctggtgaaacccaggacggcagtgacatgagagacagt
agtgtgctgagggccgccctgcaggaggcggactctccagagagggccaaccaaccgtca
ttcaacgtcacgctgctggactggatcaatgttcaagaccggcccaatgacgtggagtca
gtcgtgaggaaatgctttgactccatcaataggctcgacccacggatcattcaaccattc
ttggcggagtgtcgtgacacaatcgccaaactggataatcagaacatgaaagccatcaaa
gggcttgaggacaggttatacgctctagaccaaatgatagcaagctgtaaaaagttggtc
aacgaacagaaggaacttgctcagggatttctggccaatcagaagcgagctgagaacctg
aaggatacgtcagtgctacctgacctgtgtctcagtcatgccaaccaactgatgatcatg
ctgacaaaccacaggaagctgctggacatcaaacagaagtgcaccactgccaaacaggag
cttgcgaacaacctacaagttcgtctcaaatggtgctgctatgtgatgttacacgcggac
caggacggagagaagctccaggccttactaaggctgctgacggagctgatggaaagggtc
cgggttgtggatgccctcagcactgtgcctcagatgtactgcctggcagtggtggaggtt
gtccgcaggaagattttcataggacactacagagagtgggcttgtgcacttgtaaaggat
ggaaaacatctctatgagacggagaaatataaaagggaaacgtttggcaagttgttcagg
aagtcttttctccgaaatcgtttatttagaggacttgactcatggccccccacttcattt
tgcacgcgaaagcccagaaagtttgactttgagcttccggatatttctcttgctgacctg
cagtacttaaggacttgttgtcctgcagaggtgcagcctttcctcagggttccaacactg
tgtgactttgagcctttgcaccagcatgtggagatgcttcaacagttggtccaagcagca
caagctgctagtgtggatgaaatgtctcaaactatcacagacttactgagcgaacaaagg
gtgtcgtgcagccagagtgcccagaggtccacggcagctgtgaccccgttgaccccgcgg
tcggacagtaccttggggaccacctctacctcctccaagacccctccttctctcagtctc
ccggcccctcccttccagcccttcactggtcccctccctggcccgggtcccacagccctg
gaggatctttctccagacagcattgatgcccaaaccttcgactttgagaccattggccac
cccaacatggatcctgtcctgcatcaggctagctctttggacctggactctctggctgaa
agcccggagtcagacttcatgtcggcagtcaacgagtttgtgatcgaaaactcacccacc
cccatcagtgaccccaccagcccagagatgatggtggagtcgctgtactcgtcagtcatc
aatgccattgacagcaagcgcatgcatgacaccactaccttggagagggagaactccaaa
atggctgctctgaaactaagcattgagaagtaccgctctgctgcagaagagtcccagact
aacctgcggtgtgtcaaggatgacctgtaccgcttcagaggcctggtgctgaaggagcag
cgagactttggcttctccctgaagaccatgaccattgaagtacggaccatggtggacgcc
attcgtaagagggaagaagaggagcttcggggacagcaccaagccatgcttctttccctg
cagcaggaccacaagaagcagcttcaagccctgactgaggagaaccaggtcaaccagaac
attgtaaaagacgtgcagcgggccattctggatcttgaggggctcctcgagcgcaaagag
aaggagctgacccagctggaggcagagagggagcgctggactgagtcggagagcgcgcac
attcagaaggccagggatctggagcagaagctcgttgctcaggcccaagaggtgcaaacc
ctggctgcctccagagacacactatccaaccagctggagatacttcacgttgagattgaa
cacggccagcagaagatccgccaggagctggaggaggccgagcagtcccacctgcaggag
ctggaggagaggatgaggcagcagcaccaggctcagctagattccctggcccaggagaac
caggtggcgctagagcgtgttgccacagagaataagtcaaagctgatggaggtcaccgac
ctccatgctgccatcctgacagagcgggacagtcggctgagggacctggaggctcgggtt
gccgaactggctgacctccgctgcaaggtggaggtggagttggccctgaaggagtctgag
atggaggagctgaggttgctttacgaggaggccaagcaggggcagcaagaagccgacatg
gggagagccacagtggtggcagagacacagtctctcagtgaacagctagccctggtcagc
aggcagctgctggctaagaatgaggagtaccagacgggcttgactgagctcaggacactg
atgcgcatggagaaggatcagtgcatctccgagctggtgaacaggcacgaggaggagagg
aaccagctccgcagtgagctgaccaccctgcagcagcaggcccaggatgtcgagaagagc
cataaccaacagctgcagaacctccaacgagacctggacctgcggattgcagcgctgcgc
aaagataaggaggagcaacaggggagttttgaggagcaggagcaacacttgaggacagtt
atctgtgatttgcaggcggaaaatgacttgcttgccaaaagattagagcaggacacacaa
gaagcccgggaaagtttgcagatggaagaggcctcgaatgctgctctaccagctgccttt
aaaaacttagagcagcaaaaggaggagatggagataagactgttagacaaaattagacta
cttgaaaatgaacttcagaaaagacaatcctctgaaagtgaggcagggttgtcggtggtg
cgggtggagattccggggtctgaggcggcggctcctctctccctggactctgccttgcag
gagcgcctgcagcaggagaccgcctccctgcgcacccagctggacctcctggagaggaga
aagaacgaagagatgcagaacctcaagacctcgctcattgcagaacaacaaactaacttc
aacactgttctcacgagagagaagctgaagaaggagcagatcatcaacgaactgacagag
gagctaaagaaggttacccagcaacaggagaaggacaaaggtctgatagagactctgtct
gaggaccgagccatcgtcatgcaggagaagaagcagctggaggaggagctgaaccgactg
cgcagcaccgccctggtgtcctcggcctactacagccccaacccgttagcactggagccc
cctggggccactgttagactggggcctggaactgaaatagaggctggggctggcgcctgc
tcctcggagccctttcctgacccagaccggctggcctctgtggccgccatcagagaagac
gacagggttgacaccgctgtggaggccagcatggtgactgtgcacgataacatcctgatg
atgtcggaggagaaacagagaatcctgttacttgagaggaccttacatatgaaggaagaa
gaaaacaagcgcctcagtcaaagactgatgtctcaaagcatgtcctcagtatcgtcacgg
cattcagagaaaattgccatcagagatttccaggttggcgacttggttctgattatcctg
gacgaaaggcatgacaactatgtgctgttcaccgtgggtcctaccctgtacttccttcac
tcagagtccctcacggcacttgacctcaaaccagatcctatgtttacttcagcatcagga
gcctccaggcggccgtgggttcttggaaaagtgatggaaaaggaatattgccaggcaaaa
aaggctcaaaaccggttcaaagttcctttgggtaccaagttctacagagtcaaagctgtt
ccatggaacaagaaagtataa
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