Esox lucius (northern pike): 105019814
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Entry
105019814 CDS
T04894
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105019814
03041 Spliceosome [BR:
els03041
]
105019814
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105019814
Spliceosome [BR:
els03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105019814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
105019814
NCBI-ProteinID:
XP_012995378
LinkDB
All DBs
Position
LG22:11752584..11761796
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AA seq
579 aa
AA seq
DB search
MEGRLKLDADLYPMGPGYVTDIDVSVGTKRGSDELFSSCLSNGPYIMTSANGNDCKKFKG
EMRSPNAPSRVIHLRQLPGDIQESEVISMGMPFGKVTNLLMMKGKNQAFLEMNSVDQAQT
MVNYYSTVTPLIRQQPVFMQYSNHKELKTDNSPNQVRVQAALQAVNAVQGGTMLASTMSG
IGGGMGATMSLGGVEMGGAGMATQSPVLRVIVENLFYPVTLDVLHQIFSKYGSVLKIITF
TKNNQFQALVQYADAMTAQHTKLSLDGQNIYNGCCTLRVSFSKLTSLNVKFNNDKSRDYT
RPDLSTGEPHNPQPGLDQHAMAAVFGSPGLISASPYGHGFPQAFTLQQAAGLSMPGALAS
LGVSHGAMAASRLGLQVLGGGGQAGVLLVSNLNPERVTPNCLFILFGVYGDVMRVKILFN
KKDNALVQMSDGTQAQLAMSHLNGVRLHGRSLRVSLSKHTTVQLPREGHEDQGLTKDYAT
SPLHRFKKPGSKNYNNIYPPSATLHLSNIPPAVTEEDLKELLISSGATVTAFKFFQKDRK
MALVQMSSVEEAVETLIEFHNHDLGDHHHLRVSFSKSTI
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggagggcagactaaagttagatgctgatctgtatcctatgggacctggctacgtcaca
gacatagatgtctcagtgggtacaaagaggggatctgatgaactgttctcttcttgcctc
tccaacggaccctacatcatgacctccgccaacgggaacgattgtaagaagttcaaagga
gagatgcggagcccaaatgctccgtcgcgtgtcatccacctgcgccagctgcccggtgac
atccaggagtctgaggtcatcagcatgggaatgccctttggaaaggtcaccaacctcctg
atgatgaaggggaagaaccaggcgtttctggagatgaacagtgtggaccaggcccagacc
atggtgaactactactctacagttactcctctcatcaggcagcagcctgttttcatgcag
tacagcaaccataaggaactgaagacggacaactctcctaaccaagtgagagttcaggcg
gccctgcaggctgtgaatgctgtccagggtggaaccatgttggcctctaccatgtccggt
atcgggggcggtatgggcgctaccatgtcgttgggaggggtggagatgggtggtgcagga
atggccacccagagccccgtgctgagagtcattgttgagaacctcttctaccccgtcacg
ctggacgtcctccaccagatcttctccaagtacgggtcggttctgaagatcattaccttc
actaagaacaaccagttccaggctttggtccagtacgccgacgcaatgacggctcagcac
actaaactgtccctagatggtcagaacatatataacggctgctgtaccctgagagtgagt
ttctccaagctgaccagcctcaacgtgaaattcaacaacgacaaaagccgggactacacc
agacccgacctctctaccggcgaaccccacaaccctcagcccggactggaccagcacgcc
atggccgccgtcttcgggtctcccggcctgatctcagcttccccttatggacatggcttc
ccccaggccttcactctacagcaggcagcgggtctgtcaatgcctggcgcgttagcgtcg
ttgggcgtgagtcacggcgccatggccgccagccgcctggggctacaggtcctggggggc
ggagggcaagcaggcgtcctgttggttagcaacctgaacccagagagagttacaccaaac
tgcctctttattctcttcggtgtgtacggcgacgtgatgagagtgaaaattctgttcaat
aagaaggacaatgcgctagtccagatgtcagatgggacccaggctcagctagcgatgagc
cacttgaacggggtccgccttcatggccggtctctgcgtgtttccctgtctaaacacacc
acggtacagctgcccagagaaggccacgaggaccaggggttgaccaaggactacgccacc
tctcccctccaccgatttaagaagcctgggtccaaaaactacaacaacatctaccctccg
tctgccacgctgcacctctccaacattccaccggcggttaccgaggaggatctgaaggaa
ctgttaatcagttcaggagctacggtcactgccttcaagttcttccagaaagaccgtaaa
atggctcttgtccagatgagctctgtggaagaagctgttgagactctcatagagttccac
aaccatgacctgggagaccaccaccacctcagagtgtctttctccaaatctaccatctaa
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