Esox lucius (northern pike): 105019846
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Entry
105019846 CDS
T04894
Name
(RefSeq) putative ATP-dependent RNA helicase an3 isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
els
Esox lucius (northern pike)
Pathway
els04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
105019846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105019846
03041 Spliceosome [BR:
els03041
]
105019846
03036 Chromosome and associated proteins [BR:
els03036
]
105019846
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105019846
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105019846
mRNA cycle factors
Common to processing body (P body) and stress granule
105019846
Spliceosome [BR:
els03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105019846
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105019846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
105019846
NCBI-ProteinID:
XP_010884634
UniProt:
A0A3P8XFH1
LinkDB
All DBs
Position
LG22:12603201..12622382
Genome browser
AA seq
746 aa
AA seq
DB search
MSHVAVENVHGLEQQLAVLGLNNADGQGGGTGRTCYIPPHLRNKEASKNADAFSRQSTFS
MAPGSYTPGGWDGGRNNGFVQNGYHDNRMNGGNRYNSGPPRMERGRGGGGYRGGRGGSYN
PVQPMQNAGGFGGYDNKDVGGWNTTKDAYTSFGARPDRGKSAFFNNGTNVSRGSYPRGGF
GGGGNSRWVEEPRDDEDWSKPTQANERLEQELFAGGNTGINFDNYDDIPVEATGQNCPHH
IDSFQDVEMGEIIMGNIALTRYTRPTPVQKYAIPIIKNKRDLMACAQTGSGKTAAFLLPV
LSQIYTEGPGEALAAQKSGGQDNGKYGRRKQYPLSLVLAPTRELALQIYEEARKFAYRSR
VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLD
MGFEPQIRRIVEQDTMPPKGIRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSEN
ITQKVVWVEDGDKRSFLLDLLNATVIPSEVQDNAGENIEKPGKDSLTLVFVETKKGADAL
EDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARGLDISNVKHVINFD
LPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKDLLDILVEAKQEVPSWLESLAYE
HQHKSNTRGRSKRFSSGGFGARDYRQTSGGSSSTGGFGGRGGRQPSGHGGNRGFGGGGGG
FGGNFYSSDGYGGSYTHQGGVDWWGN
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggccgtcgagaatgtacacggtctagaacagcagcttgctgtcctaggc
ttgaacaatgctgatggacagggcgggggtactggcaggacctgttacattccacctcat
ttacggaacaaagaggcttccaaaaatgcagatgcattctctagacagagcactttctca
atggcaccaggaagctatactcctggcggttgggatgggggacgcaacaatggctttgtg
cagaatggctaccacgacaaccgcatgaatggcggcaacaggtacaatagcggcccgcct
cgcatggagagaggccggggtggcggaggttaccgtggtggcaggggcgggtcctacaac
cctgtccagcccatgcaaaacgccggagggtttggcggttatgacaacaaagatgtcggt
ggctggaacaccactaaagacgcctacaccagctttggcgcgcgtcctgacagggggaaa
tctgctttcttcaacaatggcacaaatgtttcccgtggaagttacccgcgtggagggttt
gggggtggtggaaacagccgctgggtggaggagcccagggacgatgaggactggtccaaa
cccactcaggccaacgagcgcctggaacaggagctgttcgctggaggtaacacagggatt
aactttgacaattacgacgacattcccgttgaggccacaggccaaaactgcccacatcac
attgacagtttccaggatgtagagatgggggagatcatcatgggtaacattgccttgacc
cgctacacccgaccgactccggttcagaagtacgccattccaatcatcaagaacaagaga
gaccttatggcctgcgcacagacgggctctggtaagactgcagcgttcctgttgccagtg
ctgagtcaaatctatactgaaggcccaggagaggccctcgctgcccagaaatctggaggg
caggacaatgggaagtacggtcgtcgtaagcagtaccccctctctctggttctggccccc
accagagaactggccctgcagatctacgaagaggcccggaagtttgcgtaccggtctcgt
gtacgtccctgtgtggtgtacggaggggctgacatcggccagcagatcagagacctggag
agaggctgccacctgctggtggccacacccggacgcctggtggacatgatggagaggggc
aagattggccttgactactgcaactacttggtgctggacgaggctgacaggatgttggac
atgggtttcgagccccagatccgacgcatcgtggagcaggacactatgccccctaaagga
atccgccagactatgatgttcagcgccaccttccccaaggagatccagatcctggcacgt
gacttcctggaggagtacatcttcctggcagtggggcgtgtgggatccacctcggagaac
atcacacagaaggtggtgtgggtggaggacggtgacaagaggtccttcctcctggacctg
ctcaatgccacagtcattccaagcgaggttcaggacaatgcaggtgaaaacatagagaaa
cctggtaaagactccctgacgctggtgtttgtggagaccaagaagggtgcagatgccctg
gaggacttcctgtaccgcgagggctacgcctgcaccagcatccacggggaccgctcccag
agggatagggaggaggcactgcaccagttccgctcgggacgctgccccatcctcgtcgcc
acagccgtggctgcacgtggcctggacatctctaatgtaaagcacgtcatcaactttgac
cttcccagtgacatagaggagtatgtccaccgtattggtcgtactggacgcgtaggcaac
ctgggcctggcgacgtcgttcttcaacgataagaacggcaacatcaccaaggaccttctg
gacatcctggtggaggctaaacaggaagtgccctcctggttggagagcctggcttatgag
caccagcacaagagcaacacccgcgggcgctctaagaggttcagctctggtggctttggt
gccagggactaccgtcagaccagcggtggcagcagcagcactggagggttcgggggtcgt
ggtggacgccagcccagtgggcacggaggaaaccgtgggttcggcggtggcggtggtggc
ttcggaggcaacttctacagtagcgacggctatggaggaagctacacccaccaaggggga
gtggactggtggggcaactaa
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