Esox lucius (northern pike): 105019902
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Entry
105019902 CDS
T04894
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
els
Esox lucius (northern pike)
Pathway
els03013
Nucleocytoplasmic transport
els03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105019902 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
105019902 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105019902 (thoc1)
03041 Spliceosome [BR:
els03041
]
105019902 (thoc1)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105019902 (thoc1)
Spliceosome [BR:
els03041
]
Complex C
Other components
EJC/TREX
105019902 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105019902 (thoc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
105019902
NCBI-ProteinID:
XP_010884738
UniProt:
A0A3P8Z6H2
LinkDB
All DBs
Position
LG03:complement(18829080..18834998)
Genome browser
AA seq
657 aa
AA seq
DB search
MSPSVLFNFNDAKDAFTASTRSALDNKTSKPLINAFNQITGNETEKKTTLDQALRQVLEE
QIVEKKALVDEYLALIYLSIDGVTEGLCSATTPFLLLGDVLDCLPLDQCDKIFSFVEENV
STWKSNSFYTAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLDNITVFNKNEQESTLGQRPAEEKEDGMEVEEGEMGDEEPGVPAPCSIPIDYNLYRKF
WTLQDYFRNPVQCYDKFSWMTFLKYSDETLAVFKSFKLDDMQASKRKLEELRTAGGEHVY
FAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCVLNDDQCSWMEETT
KLVYQLLREIPPDGDKFATMVEHVLNTEENWNSWKNEGCPSFVKDRPVDDKPKRPTRKRQ
APEDFLGKGPDRKVFMGNDELTRLWNLNHDNMAACQSESREFMPSLEEFFEEAIEQADPA
NMVEDEYKVVRNSNYGWRALRLLSRRSPHFFQPTNQQFKSLADYLESMVIKLAKELPKDL
PSEEIKTGEEDDEDNGDTLLKESNDSPSMQTKVVSNQQMDEIAAKLGAQWKTLASQLEIK
AAEIREIETDSEDVDMQAKLLLVAWQDREGTQATVESLITALNNAGFPKIADILNET
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccatcggtcttattcaacttcaacgatgcaaaagatgcatttacagcctcaaca
agaagtgctttggacaacaaaaccagcaaacctctgataaatgctttcaaccagatcact
ggaaatgagacagagaagaagaccactcttgaccaagctctgaggcaagtcctggaggag
cagattgtggaaaagaaagcactcgttgatgagtacctcgctctgatctatctcagcatt
gatggagtcactgaaggtctctgttctgccaccactcctttcttactgttgggagatgtt
ctggactgtcttcctctggaccagtgtgataaaatattctcgtttgttgaagagaatgtt
tccacttggaagtctaactccttctacactgctgggaagaactacctgttaaggatgtgt
aatgatcttctgaggaggttgtccaagtctcagaacacggtcttctgtgggcgcatccag
ctgttccttgctcgtctcttcccgctgtctgagaaatctggtctgaacctgcagagccag
tttaatctggataacatcacagtgttcaacaaaaatgagcaggagagcaccctgggccaa
aggccggcagaggagaaagaagatgggatggaggtggaagagggtgagatgggagatgag
gaacccggtgtacctgcaccatgttccatccccattgactacaacctgtacagaaagttc
tggaccctgcaggactacttcagaaaccctgttcagtgttatgacaagttctcctggatg
acgttccttaagtattcggatgagaccttggcagtgtttaagagcttcaagctggatgac
atgcaggcttcaaagaggaagctggaggagctgagaacagcaggaggagagcatgtctac
tttgccaagttcctcaccagcgagaagctaatggacctgcagctcagtgacagtaacttc
agacgacacattctcctgcagtaccttattctgttccagtacctcaagggacaagtcaag
ttcaaaagctccagttgtgtcctaaatgatgaccagtgttcttggatggaggagactacc
aaactggtctaccagcttctcagagagatcccacctgatggagacaagtttgccaccatg
gtcgagcatgtcctgaacacagaagagaactggaactcatggaaaaacgagggatgtcca
agttttgtgaaggaccgaccagtagatgataaacccaagagacccacgaggaaaagacaa
gctccagaagacttcctgggtaaaggccctgacagaaaggtcttcatgggaaatgatgaa
ctgacaagactttggaatctgaaccacgacaacatggcggcttgtcagtcagagagcagg
gagttcatgccttcactggaagagttctttgaagaggctatagaacaggctgacccagcc
aacatggtggaagatgaatacaaggtggtgcgtaactcgaactacggctggcgagccttg
cgtctgctgtccaggaggagtcctcatttcttccagcctaccaaccagcagttcaagagc
ctggctgactacctggagagcatggtcatcaaactggccaaggagctgccgaaggacctt
ccgtcagaggaaataaagacaggagaggaagacgacgaagacaatggggacacccttctc
aaagagagcaacgacagtccaagcatgcagaccaaggtggtgtccaaccagcagatggat
gaaatagcagccaagctgggggcccagtggaagaccctggctagtcagctggagatcaag
gcagcagagatccgggagattgagacagacagcgaggacgtggacatgcaggccaagctg
ctcctggtggcctggcaggaccgtgaggggacccaggccacagtggagagcctgatcaca
gccctcaacaatgccggcttccctaagattgcagacatcctgaacgagacatag
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