Esox lucius (northern pike): 105019979
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Entry
105019979 CDS
T04894
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
els
Esox lucius (northern pike)
Pathway
els03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
105019979 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
els01009
]
105019979 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
els04515
]
105019979 (pcdh20)
Protein phosphatases and associated proteins [BR:
els01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105019979 (pcdh20)
Cell adhesion molecules [BR:
els04515
]
Cadherins
Protocadherins
105019979 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
105019979
NCBI-ProteinID:
XP_010884887
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Position
LG22:complement(3798363..3804477)
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AA seq
893 aa
AA seq
DB search
MFNKKGPSLGSRLRGLIWGLCILLLYTSPLYCFANFSQAKGLVYKIKEGLPAGVLIGAVG
SDLHLDFSLDPPLLFNLPQKKPGDQFVSLNSSTGELFTSGTEIDRETLCPDTSDLGQGCI
LSLDIFVLPQQYFQLVKVKILIEDVNDNHPRFPTNEIRVSVPENAQVNARFVVEQSATDP
DLGFNGVQTYWLVNDFGVFTLDVEENEGGELTPFLIVTDELDREHQQEYVTDIIAEDGGN
PPLLGTATLRIIITDVNDNCPQFTESQVNVTLYGNTSKGAQLARLRAFDPDHGANAAISY
AYSERVPRETGALFHLDHATGAIKLAGKVDASTGRLYKLTVLAKGPGCIPAVAAVTVHVI
RAGSGPPVILPRYIAPEKDGVVTVKESELPFSPIAFFTVKNTDQRGLKTECVLEGSGPFR
LSPYKLFKNEFLLETTEPLDYEQRRDYELTVVARSPKGLVIKTFIKILVLDENDNAPIFK
LSLHELSVEENNPPNTFLTQLQATDKDSESRGEVIYLLGSDAPSIFLLDRMAGVLTVSVS
LDREEKETYRFMVRAVDRGSPSKESIATVVVTVLDRNDNSPRFINKDFTFFVPENFPGFG
EIGILSVADADAGENGWVALSIINGSDVFVIDTGRGALRARTPLDREQQGTYHLWIEAVD
GGEPALSCVTMVTVLLLDVNDNPPVVLFPQSNQSYMLVLPSTLPGTSITEVYAVDKDTGM
NAVIAYSIIRRKGGEPGSFDIDPNTGNITLKRELSDRGLYSLLVKVSDHGHPEPLHSTVL
VNLFVNETVSNESYIQSLLTSEAVIEIGEEKPWYVGKLTERPGPEGMLPCRVVLIGLSVT
CLGLLFLVITLTACICCRKLKKHKMKRLEVEIPLKMNGDLHAVDRKLMQISNI
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaaaaaggccccagcctaggttcaagactcagagggctaatatggggtttg
tgcattctcctactttacaccagcccactctactgttttgctaatttcagccaagcgaaa
ggactcgtctataagattaaagaaggattacccgctggcgtgttgataggggcagtgggt
tctgacctacacttggatttctcccttgatccccctctattgttcaacctgccccagaag
aagcccggggaccagttcgtcagtctgaacagctcaaccggggagctgtttacatcgggg
accgagattgacagggagacgctctgtcccgacacatcggacctcggccagggctgcatc
ctctctctggacatattcgttctaccccagcagtatttccagctggttaaggtcaaaatc
ctgatagaggatgttaacgataaccacccgcggttcccgaccaatgagatcagagtgtcg
gttcccgagaatgcgcaggtcaacgcccggttcgtggtggagcagtctgcgacggacccc
gacctggggttcaacggggtacagacctactggctggtcaacgactttggggtgttcacc
ctggacgtggaggagaacgaggggggcgagctgacgccgttcctcatcgtgacggacgag
ctggaccgcgagcatcagcaagagtacgtgacggacataatcgcagaggacggtgggaat
ccccccctcctgggcacggccacgctgaggattatcatcacggacgtcaacgacaactgt
ccccagttcacagagtcgcaggtcaacgtcacactgtacgggaacacgtctaagggagct
cagctggcacgtctgcgcgccttcgaccccgaccacggcgccaacgccgccatcagctac
gcgtacagcgagcgcgttccccgggagaccggtgccctgttccacctggaccatgccacc
ggggcgatcaaactggccggcaaggtcgacgccagcaccgggcggctctacaagctcacc
gtcctggccaaaggccccgggtgcattcctgccgtcgccgcggttaccgtgcacgtgatc
cgagcgggttctggcccgcccgtcatcttgccacgctacatcgcaccggagaaggacggc
gtggtgactgtgaaggagtccgagctgccgttttctccgatcgcgtttttcacagttaag
aacacggaccagagaggactaaagacggaatgtgttctggaagggtcgggtccattcagg
ctgtcaccttacaaactgtttaagaacgagtttctgctggagaccacagagccgctggac
tatgaacagagacgggactacgagctgaccgtggtggcccgcagccccaaaggcctcgtc
atcaagaccttcattaaaatcctggtgctggatgagaacgacaacgcacccatcttcaaa
ctgtctctgcatgagttgtctgtggaggagaacaacccacccaacaccttcctgacccag
ctgcaggcaacggacaaggacagcgagagtagaggggaggtgatctacctgttgggctca
gacgccccgtccatcttcctcctggacaggatggccggcgtcctcacagtgtccgtgtct
ctggaccgcgaggagaaggaaacctacaggttcatggtgagggcggtggatcgaggctcg
cccagcaaagagtctatagccacggtggtggtcactgtgcttgaccgcaatgacaacagc
ccgcgcttcatcaacaaggacttcaccttcttcgtcccggagaactttcccgggttcggg
gagatcggcatcctctccgtggcggacgcggacgcgggcgagaacggctgggtggcgctc
tccatcatcaacggcagtgacgtgttcgtgatcgacacggggcgcggcgccctgcgagcc
cggacgcccctggaccgcgagcagcaaggcacgtatcacctctggatcgaggctgtcgac
gggggggagcctgccctctcctgcgtcaccatggttacggtcctcctcctggacgtgaac
gacaaccccccggtcgttttgtttccccagtccaatcagtcctacatgctggtgttgccc
agcacgctcccagggacctccatcactgaggtgtacgccgtggataaagacactgggatg
aacgccgtcatcgcctacagcatcatccggaggaaaggaggcgagccgggatcgttcgac
atcgaccccaacacgggcaacatcacgctgaagagggaactcagcgaccgaggcctgtac
agtctactggttaaagtgtccgatcacggtcatccagagccactgcactccacggtcctg
gtcaacctcttcgtcaacgaaacggtcagcaacgaaagctacatacagagcctcctcacc
agcgaggcggtgatagagattggcgaggagaagccgtggtatgtggggaagctgacggag
aggcctgggccggaggggatgttgccctgtcgggtggttctcataggtctctccgtcacc
tgcctgggactgctcttcttggtcatcacgttgactgcctgtatatgctgcaggaaactg
aagaagcataaaatgaaaaggcttgaggttgagattcctctgaagatgaacggggacttg
catgcggtggacaggaagctgatgcagatttccaacatatga
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