Esox lucius (northern pike): 105020024
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Entry
105020024 CDS
T04894
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
els
Esox lucius (northern pike)
Pathway
els04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105020024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
els04121
]
105020024
Enzymes [BR:
els01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105020024
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105020024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
fn3
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
PRY
Pur_ac_phosph_N
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
105020024
NCBI-ProteinID:
XP_010884969
UniProt:
A0A3P8YZ68
LinkDB
All DBs
Position
LG22:4875944..4910900
Genome browser
AA seq
685 aa
AA seq
DB search
MDALESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCASNEPVQSIAAFQCPTCR
YVISLSPQRGLEGLKRNVTLQNIIDRVQRAASSGPLPPSPHSGPDSPGEDVGRFALALVP
APAAMTSPGTPPSPVQCQFCEQDPPQDAVKTCVTCEVSYCDGCLRATHPNKKPFTGHRLI
EPLPGCHLRGLQCLEHEEEKVNMYCVTDEQLICSLCKLVGRHRDHQVAALSERYEKFKQA
LDSNLSHLVKRNNELESLMGKLIQTCQHVEVNASRQEGKLMEECDTLIDIIQQRRQIIGT
KIKEGKAVRIRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSITERVSMA
TASSQVLIPEINLTDTFDTFALDFTKEKKLLESLDYLTAPSPPGIREELCTASYDTITVH
WTSDDEFSVLSYELQYAIFTGQANIVSLCNSADSWMIVPNIKQNHFTVHGLQSGTKYIFI
VKAINQAGARSSEPGTLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDETTSKKGHGQERF
ASQSSYGVIGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRCHN
SWVVRHNSKELAIEPSPHLRRVGVLLDYDAGSLTFYDAVGSQHLHTFHVSFAQPVCPVFN
VWNKCLTVLTGLPIPDHLEGAETQD
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgctggagtctgagctgacttgcccaatctgcctcgagctctttgaggacccg
ctgctcttgccctgcgcccacagcctctgcttcggctgcgcccatcgcatcctggtgtcc
cactgtgcctccaacgagccggtgcagtccattgcagccttccagtgccccacctgccgc
tatgtcatctccctcagtccgcagcgcggcctagagggactgaaacgcaacgtcacccta
cagaacatcatcgaccgcgtccagagggccgcctcctccggccccctgcccccgtcgccc
cacagcgggcccgactcgcccggcgaggacgttgggcgtttcgccctggctctggtccca
gcccccgccgccatgaccagccccgggacgccgcccagccccgtgcagtgccagttctgc
gagcaggacccgccgcaggacgccgtgaagacctgcgtcacctgcgaggtctcctactgc
gacgggtgcctgcgcgccacgcaccccaacaagaagcccttcacgggccaccgcctcatc
gagccgctgcccggctgccacctgcgcggcctgcagtgcctggagcacgaggaggagaag
gtgaacatgtactgcgtcaccgacgagcagctcatctgctccctctgcaagctggtgggg
agacacagggaccaccaggtggcggcgctgagcgagcgctatgagaaattcaagcaagcg
ttggattccaacctgagtcatttggtcaagaggaacaatgagttggagagcttgatggga
aagttgatccaaacctgccagcacgtagaggtcaatgcgtctcgacaggagggtaaactg
atggaagaatgtgacaccctgattgatatcatccaacaaaggagacagatcattgggacc
aagatcaaggagggaaaggctgtcaggattaggaagctagcccagcagatctccaactgt
aaacaatgcatcgaaaggtcctctgccctcatcacccaggcggaccagacactgaaggag
accgaccacgcccgcttcctccagacggccaagagcatcacagagagggtttccatggcg
accgcctcctcccaggtgctgattccagagatcaacctgactgacacgtttgacacgttt
gccctggactttaccaaggagaagaagctgctggagagtctggactacctcacagcgccc
agccctccgggtatcagggaggagctctgcacagcgtcgtatgacaccatcacagtgcac
tggacctcggacgacgagttcagcgtgctctcctacgagctgcagtacgccatcttcacc
gggcaagcgaacattgtcagcctgtgtaactccgccgacagctggatgatcgtgcccaac
atcaagcagaaccacttcaccgtgcacggcctgcagagtggcaccaagtacatcttcatt
gtcaaagccatcaaccaggctggagcccggagcagtgaaccagggaccctcaaaaccaac
agccaaccctttaagctggaccccaagtccgcccacaggaagctgaaggtctcccatgac
aacctgacggtggagcgcgacgagaccacgtcgaagaagggacacggccaggagcgattc
gctagccagagtagctacggcgttatcggcaacgtttacattgatagtggacggcactac
tgggaggctttgattggaggaagcacatggtacgcagtgggcatcgcttacaagtcggcc
cccaaacacgagtggatcggtaaaaactcggcctcttgggtgttgtgccgctgccacaac
tcctgggtggtgcgtcacaacagcaaagaactggccatcgagccgtccccccacctacgc
cgcgtgggagtcctgctggactacgacgccggctcgctcaccttctacgacgccgtgggc
tctcagcacctgcacacttttcacgtttccttcgcccagcccgtgtgtcccgtcttcaac
gtctggaacaagtgtctgaccgtcctcacgggcctgccgatccccgaccacctggaaggg
gcagaaacccaggactga
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