Esox lucius (northern pike): 105020049
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Entry
105020049 CDS
T04894
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
els
Esox lucius (northern pike)
Pathway
els03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105020049 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105020049 (dis3)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
105020049 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
PIN_4
Rrp44_S1
CSD2
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
105020049
NCBI-ProteinID:
XP_010885011
UniProt:
A0AAY5K129
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All DBs
Position
LG22:complement(2683856..2692512)
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AA seq
952 aa
AA seq
DB search
MLKSKTFVKKTRSGGIMKIVREHYLRDDIWCGSEFCTECKQDESVLQKDACIESNLCVFP
HYLLPDTNVVLSQIDILEDPLIKNVIILQTVLQEVRHRSAPIYKRLKDILHDKEKHFYTF
TNEHHRETYIEREPGESANDRNDRAIRVSTKWYSDHLKNARTEEGLRIVLLTNDRENKDK
SEEAGLLTYRCEEYIKSLIANPELVDRLALTNDDKNDITSSKVLFPEHLPLSRIQSGIKS
GTFLQGTFRASRDNYLEATVFVHGEGDESTEVLIQGLQNLNRAVHQDLVAVEMLPQNQWV
GPSSVVLQDEGPKDDDVTGDDEEEKALKGAVVGAGPRKPTARVVGIIKRNWRPFCGMLFL
SQIKEATRHLFTPADRRIPRIRIETRQASTLAGQRIMVAIDGWPKHSRYPNGHFVRSLGC
AGDKETETEVLLLEHDVPHQDFSQAVLSFLPKMPWSITEEDMAVREDLRHLTVCSVDPPG
CTDIDDALHCRDLPNGNQEVGVHIADVSHFIRPGNALDQEAASRGTTVYLTGRRIDMVPE
LLSSNLCSLRCNVERLAFSCIWEINEKAEIIKTRFAKSVINSKASLTYAEAQMRIDDTSM
NDDITKSLRGLNRLAKILKRQRIEKGALTLSSPEVRFHIDSETHDPIDLQTKELKDTNSM
VEEFMLLANISVAQKIYEEFSECALLRKHPAPPPSNYDILNKAAKSKNLVIHTDSAKALA
DSLDAARVDNFPYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRRY
SDIIVHRLLAVAIGADSTYPDLMDKHKQSALCNNLNYRHKMAQYAQRASVAFHTQLFFKS
RGIMNEEGFILFVRKNAIIILIPKFGLEGTVFFENKNKPSPKLVFNDEATTLTVEGHTFN
MFDKVKVTISLDASNIQHQKIRMSLVEPVIPGVSVAPSEPNEPEAKKAKLDH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtcaaaaacgttcgttaagaagacccgatcgggtgggatcatgaaaatagtg
cgtgagcactacctcagagacgacatatggtgcggaagtgaattttgtactgaatgcaag
caagatgagtctgttttgcagaaagatgcttgcattgaaagcaacttgtgtgtattccca
cattatttgctaccagatacaaatgtggtcttaagccagatcgatatattggaggatccc
ttgatcaagaacgtgatcattcttcagactgtccttcaagaagtccgccacagaagtgct
ccaatatacaagcggttgaaagacatccttcacgacaaagagaaacacttttacaccttc
actaacgaacaccacagggaaacctacatagaacgagagccaggggaaagtgctaatgat
cgtaacgacagagccatccgcgtgtctaccaaatggtacagtgatcatctgaaaaatgcc
cggacagaagagggactacggatcgttctcctgaccaacgatagggagaacaaggacaaa
tccgaggaggcgggcctgctcacctacagatgtgaggaatacatcaagagtctgattgcc
aaccctgagcttgtggatcgtctggctttgaccaacgatgacaagaatgacatcaccagc
agtaaggtgctgttcccagaacacctccccctgtccaggattcagtcagggattaagagt
ggaaccttcctgcagggaacgttccgggccagcagggacaactacctggaggctactgtg
tttgtccacggcgaaggagacgagagcacagaggttctgatccagggtctacagaacctg
aacagggctgtgcatcaggatctggttgccgtggagatgctgccccagaaccagtgggtg
ggtccgtcctctgtggtcctgcaggacgaggggcccaaggatgacgatgtcacaggagat
gacgaggaagagaaagcgctgaagggtgccgtggtgggggcagggcccaggaagcccacc
gcccgagtggtggggatcattaagaggaactggaggccgttctgtggcatgctgttcctg
tcccagatcaaagaggcgacccggcacctctttaccccggctgaccgtcgtatccccaga
atccgtatcgagacgcgccaggcgtccacgctggcggggcagaggatcatggtggctatc
gacggctggcccaaacactccagataccccaatggtcatttcgtgcggagcctgggctgt
gctggcgacaaggaaacggagacggaggtgctgctgctggagcacgacgttccccaccag
gacttctcacaggccgtccttagtttcctccccaagatgccctggagcatcacagaggag
gacatggcggtgagagaggacctgaggcatctaactgtctgcagtgtggatccccctggt
tgtacagacattgacgatgccctgcactgtagagacctgcccaatggaaaccaagaggtt
ggtgttcacatagcagatgtgagtcacttcatccgtcctggcaatgccctggaccaggag
gcagccagccgcggaacgaccgtctacctgactggacggagaatcgacatggtccctgag
ctcctgagttccaatctgtgttctctccgttgtaatgtggagaggttggccttctcttgt
atttgggaaatcaatgaaaaggctgagataatcaagacccgattcgctaaaagtgtcatc
aactctaaggcctctctcacatacgccgaggctcagatgaggattgacgacaccagcatg
aacgatgacatcaccaagagcttacggggcctgaaccggctagccaagatcctgaagagg
cagaggatagagaaaggcgcattaaccctttcctcccccgaggttcgtttccacattgat
agtgagactcacgatcccattgacctacagaccaaggagctcaaggacaccaactccatg
gtggaggagttcatgttgctggccaacatctccgtggctcagaagatctacgaggagttc
tcagagtgtgccctgctcaggaagcacccggctccgccaccgtccaactacgacatcctc
aacaaggctgccaagtccaagaacctggtgatccacaccgactcggccaaagccctggca
gactctctggatgcggcccgggtggacaacttcccctacttcaacacgctgctgcgtatc
ctggcaacgcggtgcatgatgcaagcagtgtacttctgctcgggaatggacagcgacttc
caccactatggcctggcctcgccaatctacacccacttcacgtcgcccatcaggagatac
tctgacatcattgtccatcggctgttggctgtggccataggggcagacagcacctacccc
gacctgatggacaaacacaagcagtccgctctctgcaacaacctcaactacagacacaag
atggcccagtacgctcagagggcctctgtggccttccacacacagctgttcttcaagagc
cgaggcataatgaacgaggagggcttcatcctgttcgtgaggaagaacgccatcatcatc
ctcatccctaagtttggtctggagggaacagtgttcttcgagaacaaaaacaaacccagc
cccaaactcgtctttaacgatgaggcaactactctgacagtggaaggacacaccttcaac
atgtttgacaaggtcaaagtcaccatcagtctggatgcaagcaacatccaacaccagaag
atcaggatgtctctggtcgaaccagtgatcccaggagtgagtgttgctccttctgaacca
aatgaaccagaagccaagaaagctaaactggaccactga
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