Esox lucius (northern pike): 105020071
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Entry
105020071 CDS
T04894
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
els
Esox lucius (northern pike)
Pathway
els04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105020071 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105020071 (vps8)
Membrane trafficking [BR:
els04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105020071 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps8
Clathrin
zf-RING_UBOX
zf-RING_2
zf-RING_5
ANAPC4_WD40
zf-RING_11
zf-rbx1
DUF5049
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
105020071
NCBI-ProteinID:
XP_028972429
LinkDB
All DBs
Position
LG22:complement(2491268..2534842)
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AA seq
1401 aa
AA seq
DB search
MSESPDTRSLVSASSQLNLMEIDTIDDKEFDIPQVDTPPTLESILNEPEDEEEPFILEDT
SLMNTESIDAHSCETSSLASSDSGDRTHLKRKRKTLELHTAIHGSVLRHSILKGISAQIV
SAADKVDAGLPTAVTVSGVIVVGTSHGLALVFDLNQALRLCLGSTATGAEYGAVSALSIN
HDCTRLLCGFAKGQITMWDLANGKLLRTITDANPPGSAILHVKFTDDPTLAVCNDSGGSV
FELAFRRVMGMRTCDSRCLFSGSKGEVCNVEPLHTPPDLKDHPITQYSLLAMASLTKILV
IGLKPSLKVWMTFPYGKADPSSIPQLAWQFVPVQKAVNPVLAFCRGVTVHFLLVKKDDSG
TIHVIKQRQLQIDCDIISLSWIDSRTLVAVDSGEKLRVVDRPSQEELETIDMAEVQLVYN
SSHFKSLATGGNVSQALALVGEKACYQSVCSYAGQIVILGTKSAHVMTLRSWRERVDFLL
KQERFVEALSLAWSFHEGTAKAVLGLFGDPAKRKGVVADKMVEILFQYVEHSLKKCPEHG
KIQVMEQHFLDVVPVVVDYCLLLQRTDLLFSQLYGRLGENCVARGVFLESLEPYIVSERL
GCLNAAVMKDLLAHLQDNNMMDSIGNCLVHMDITSLDIQQVVQMCWTNQLYDAMIYVFNR
GINDYINPMEKLFQVITPPLRQGRALTDEQVVMGNKLLVYISCCLAGHAYPLGDIPEDLV
SQVKNQVFEFLIGVHSADAGPDEDMYPYIRTLLHFDTREFLNVLALTFEDFKNDKQALEY
QQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCCPDD
DSRHTERQQVLLELLQAGGVVQFDEGRLLRLAEKAEFYQICEFLYEQKHQYDKIIDCYLR
DPLRKGEVFNYIHNLLSIPGYSSEEKQCVWNKALQHIQELVTLDPAKSADLVVVHFPEEV
GPIITQLQDDHLVFQFLRCLLDLREGPHPQAILKLSPDLNELHISLMCRFAPRQLTDFLK
SSQEYRLEEAIQITKQNQLHEATAYLLEKKGDAHGAFQVLLKVQNIVLNSALSPRGGGAQ
QRSGEECEGGAVLRRVEEGLRDIIALCHRSSQSLNPQQREVLWFPLLEAMMSPQKLLKGP
DARPTSEALKELTMNVLNRMSSFIPLPAIIQRILQDPVYGKGKLAEIQGLILGMLETFNY
EQTLLETTTSLLNHDLHWSLSHLRAVVSKGLHPRQDQCNICLQQYKRRHDSPEQIIVFSC
GHLYHCHCLQRKGRSQMDPRLFQAWSCYKCTSSQGGRGGDRGALETGRGRNTSLAQTSRT
AVGDVKKVFVETTLDPQQSQSWDQLRSLYRGPSRLAILSEISHCHGNEKSGLLNPAQPGT
GSIFHSENFQLKLSPPPLVEE
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatcaccggacacccgcagtttggtttctgcgtcatcccagctcaatttaatg
gaaatagatacgatcgacgataaagagtttgacatcccgcaagtggacacccctcctact
ctggagagcatcttgaatgagcctgaggatgaggaggagcccttcatcctggaagacaca
agcctgatgaacacagagagcatcgatgcccattcctgtgagacgtcttcactggccagc
tctgacagcggagaccgaacacacctcaaacggaagaggaagacattggagctgcacaca
gcaatccatggttctgtactccgacacagcatcctgaaaggcatctctgcccagatagtc
tcagccgctgacaaagtagatgctggactaccaactgcagtaaccgtatctggagtcatc
gtggtggggacatctcatggcttggctttggtgtttgatctcaaccaggcactccggttg
tgcctggggagcacagcgacgggggcggagtatggagcggtctccgcccttagcatcaac
cacgactgcacccgcctgctctgcggctttgccaagggacagatcaccatgtgggacctg
gccaatgggaaacttctgaggaccataacagatgccaacccgcccggaagtgccatcttg
catgtcaagttcactgatgaccccacgctggcggtgtgcaacgacagtggcggctccgtg
tttgagctggctttcaggagggtgatgggaatgcgtacatgtgattcccgctgtctgttc
agtggctctaagggggaggtttgcaatgtggagcccctgcacacccccccggacctgaag
gaccaccccatcacacagtactccctactggccatggcctcccttaccaagattctggtg
attggactgaagccctccctcaaagtgtggatgacatttccctatggcaaagcggacccc
agcagtatcccccagctggcctggcagtttgttcccgttcagaaggctgtcaaccccgtc
ctggccttctgcagaggagtcactgttcacttcctgctggtcaagaaagacgacagcgga
accatccatgtcatcaaacagagacagctgcagatcgactgtgacatcatcagtctgagt
tggattgacagtcgtaccctggtggcggtggacagtggggagaagctccgcgtggtggac
cgacccagccaggaggagctggagaccatcgacatggctgaggtgcagctggtctacaac
agcagccattttaaatcgctggccacggggggaaacgtcagccaggcactggctctggtc
ggagagaaggcctgctatcagtcagtctgcagctacgctggacaaatcgtcatacttgga
accaagtcagcccacgtcatgacactgaggagctggcgagagcgggtggactttttgttg
aaacaggagcgttttgtcgaggctctgtccttggcgtggtcctttcacgaggggacagcc
aaggctgtactagggttatttggtgacccagcgaagcggaaaggagtggtggctgacaag
atggtggagattctgttccagtatgtggaacactcgctgaagaaatgtcccgaacacggg
aagattcaagtaatggaacaacacttcctggatgtggtgcctgttgtggttgattactgt
ttactactgcagcggacggacctgctgtttagccagttgtatggtcgcctgggggagaac
tgtgtggcgcggggggtcttcctggagagcctggagccctacatcgtgtcggagcgtcta
ggctgtttgaacgctgccgtcatgaaggacctgctggctcatctgcaggacaacaacatg
atggacagcatcgggaactgtcttgtccacatggacatcaccagcctggacatacaacag
gttgtccagatgtgttggacaaaccaactgtatgatgccatgatctatgtcttcaaccga
ggcattaacgactacattaaccctatggagaaactcttccaggtcatcacccccccactc
agacaaggcagggccctcacagatgaacaggtagtgatgggcaacaagctgcttgtttat
atcagctgctgtctggctggacatgcgtatccactaggggacatcccagaagaccttgtg
tctcaggtcaagaaccaggtgtttgagttcctgattggggttcactcggcagacgcgggc
ccagacgaggacatgtacccctacatcagaacactgctgcactttgacacccgggagttc
ctcaacgtccttgccctgacgtttgaggactttaagaacgacaaacaagctcttgaatat
caacagaggattgtggacattttactgaaggtgatggtggagaacagtgacttcacgcca
tctcaggtgggatgtctgttcaccttcctcgcccgccaactggccaagccagacaacacc
ctctttgtcaacaggaagctcttcgatcaggttctggagttcctgtgttgtcctgatgat
gactccagacacactgagcgacaacaggtgctgttagagctgctgcaggcagggggcgtg
gtccagtttgatgagggacgactgctgagactggctgagaaggctgagttctaccagatc
tgtgagtttctctatgagcagaagcaccagtatgataagatcatcgactgctaccttaga
gatccactgagaaagggggaggtctttaactacatccacaacctactgtccattcctggc
tacagctctgaggagaaacagtgtgtctggaacaaagcattgcagcacatccaggagttg
gtgacccttgaccctgccaagtcagctgacctggtagtggttcacttccctgaagaagtg
ggacccatcatcacccaattacaggatgaccacctcgtgtttcagttccttcggtgcctc
ctggacctgagggaaggccctcatccccaggctatcctgaaattgagccctgacctgaat
gagcttcatatcagcttgatgtgccgctttgccccccgccagctcactgactttctcaag
tcctcccaggagtacagactggaggaagctatacagattaccaagcagaaccagctgcat
gaagccacagcctacctgttagagaagaagggtgatgcccacggagcatttcaggttttg
ctgaaggtacaaaacattgttctaaattctgcgctctcaccgaggggggggggggcgcag
cagaggagcggagaggagtgcgagggaggggcggtgctgcggagagtggaggagggtttg
agagacatcattgctctgtgtcacaggagctcccaaagtctcaacccacagcagagagag
gtgctctggttccctctgcttgaagcaatgatgtcaccgcagaagctgttgaaaggaccg
gacgcccgccccacatcagaggcgctgaaggagctgaccatgaacgtcctgaaccggatg
agtagtttcatccccctccccgctatcatccagcgcattctacaggaccctgtgtatggg
aaagggaagctggcagagatacagggtctgatcttggggatgctagagaccttcaactat
gagcagacattactggagaccaccaccagcctgctgaaccatgacctccattggtcgttg
tcccacctgcgggctgtggttagcaaggggctgcacccccgtcaggaccagtgcaacatc
tgtctccagcagtacaagagacgacacgacagccctgagcagatcatcgtattcagctgt
ggccatctgtaccactgtcattgtcttcagaggaaggggaggagccagatggaccccagg
ctctttcaggcttggagctgctacaagtgtacttcctcccagggaggaaggggcggggac
aggggtgcattggagactggaagggggcggaacacctccctagcacagacgtcccgaaca
gcagtgggggatgttaaaaaggtgtttgttgagacgacactggatccccagcagagccag
tcctgggaccagctacggagtctgtatagaggcccatccaggttggccatcctgtcagaa
atctcccactgccatggcaatgagaagtcaggcctcctcaaccccgcccaaccaggaaca
ggaagtatattccacagtgagaacttccagctcaaactctctccgccgccattggttgaa
gagtag
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integrated database retrieval system
