Esox lucius (northern pike): 105020152
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Entry
105020152 CDS
T04894
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105020152 (caprin2)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
105020152 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
105020152
NCBI-ProteinID:
XP_010885202
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Position
LG23:23682723..23693684
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AA seq
963 aa
AA seq
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MVQLSPSPAQNVSPPPGCSERMGSQWCPKSASPKRGSPGGLSPLQLALAASTTTYQGYES
YIEDGLICLKHKVRNLEKKKMKLEDYMKRLKNGESLNQDQLGAVEKYDEVIHNLEFAQEL
HKTLSGLTQDLLKAQKKAVRKEQIAMVEVERRRLCTVLQVQFLLQTLLQHEHIRKDLLSA
CNHAPHLQDAELKSLLELAVLLGLKRDKNLSLKEQMERAALVYLDLLEGKDKPVAGSTYK
AMKEQLSKLIDSGYFDRVLPPPSKSPKAVEILLIKEKDQSVKAESPSSLMKSNTKDVPRR
EFLNRNYMPDTDPNGYRDTPTTQTWKEKFQAMKDQEPPDSWDMDLPSSQPVIRKPWKGAA
VLIPKVPDIKKQNAEPKKRRKKNSKREQYTSSGPRAETAVEVFNSPSSLPKDPILRKQKL
EDLMAKIRGSFSFMQDSLLDDEGTPTIGHSRLSQRASGCCSPLVQRDSRKRPADLHRTLH
STPLPSRLLPIDDKPSLVNGDSGCVESCDLEQTTQDLELNTEDLAHESCLQRSESETAYP
SLPAPPLYHRESSISITQEDKTPAWTTISESKHESPCKSVVPLHTPTTTPTPTQGQHFST
PPSRHATRSSPVPFQTMHSVFKVNVPLLPTGDFKSDIVTRSESNNMVYVSTSTQTPPEFA
PLEDEHLQSVHQSECQVGSGGQSLLSSSHSGGTIGRSGQSYYRGSGRGMARGGKGLAHYF
RSFGFDGFRAGLRSPRGSFIPQAHLYGARDTGFQHSYRRGGGNVGQRNSAGWSDSSQVSS
PDREGNYSLVDSAHGESLHSVGMDLTPQVNPHAPHTMMHIPMYPLHQPPQPLRVAFTAAR
TANYVPGTLDQPIAFDQLNSNLGDMFDTHLGRFTCPANGTYVFLFHILKLAVNVPLYVNL
MRNDEVMASAYANDGGPDHETASNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLL
YQD
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagttgtctccatctccggcccagaatgtctctcctccacctggctgctcggag
agaatggggagccagtggtgccccaagtcagcaagccccaagaggggctccccaggtgga
ctgagtccactgcagttggcgctggctgcctccacaaccacataccagggctatgagagc
tacatcgaggatggcctcatctgcctcaagcacaaggtccgcaacctggagaaaaagaag
atgaaattggaagactacatgaagcgtttgaaaaacggggaatcacttaatcaagaccag
ctaggtgcagtggaaaagtacgatgaagtgatacacaacttggaatttgcccaggagctg
cacaagaccctgagcggcctcacacaggacctcctaaaggcccagaagaaggcagtgagg
aaggaacagatagccatggtcgaggtggagagaaggaggttgtgcacagtactgcaagtc
cagttcctcctgcagaccttgctgcagcacgaacacatcaggaaggaccttctctctgct
tgtaaccacgccccccatctccaggatgcagaactaaagagtctgctagaactcgctgta
cttctggggttaaagcgggacaagaatttgagtttgaaggaacagatggagagagcggct
ctggtctacctggacctgctggaggggaaggacaaaccagtagccggctccacctacaag
gccatgaaagagcagctgtccaagctgattgatagtgggtacttcgatcgtgtactgcca
cctccaagcaagagtcccaaagcagtggaaattctgctgataaaagaaaaggatcagtca
gtaaaagcagaaagcccttcttcccttatgaagtcaaacacaaaagatgtgcctagaaga
gagtttcttaacagaaactacatgcctgacacagaccccaatgggtatcgagacactccc
actactcaaacctggaaggagaagttccaggccatgaaggaccaggagccaccagactca
tgggatatggatttgccctccagtcagccagtaatccggaaaccatggaaaggggcggct
gtgcttatccccaaagtgccagatatcaagaaacaaaatgcagaacccaaaaagagaagg
aagaaaaactctaaaagggaacagtataccagcagtgggccacgtgcagaaacagcagtg
gaagtgttcaactccccttcttccttgcccaaggaccctatcctacgcaagcagaagctg
gaggacctaatggctaagatccgaggctcctttagcttcatgcaggactctcttttggat
gatgaaggaacacccactatcggacattctagattgagccagcgtgcctctggatgctgc
tctccactcgtgcagagggattcaaggaaaaggccggcagatctacacagaacactgcat
tctacgccgttgccctctaggctcctccctattgatgacaaacccagtctggtcaatggt
gacagtggctgtgtggagagctgtgacttggaacaaactacacaagatctggaactaaat
acagaggacctggctcatgaatcctgtctacagagatcggagagtgagactgcctacccc
tctctcccagctccacctctttaccatagagagtcctctatctccattacccaggaagac
aagacccctgcttggactaccatctctgaatctaagcacgaatctccctgtaaaagtgtg
gtgcctcttcatacccccaccacaactccaacccccacacaggggcagcacttctcaaca
cctccaagcagacatgcaaccaggtcctccccagttcccttccagacaatgcattcggtg
ttcaaggtgaatgtacccttacttccaactggggacttcaaatctgatattgttacccgt
tcagaatccaacaacatggtttatgtttctactagtacccagaccccaccagagtttgct
cccctggaggatgaacacctgcaatcggtgcaccagtcagaatgtcaagtgggtagtggt
gggcagagtttactgtccagtagccattcaggtggcaccataggccgctctggccagtca
tactacagaggatctggtagaggtatggcacgtggtggcaagggcctggcacactacttt
cgctcttttggttttgatgggttccgggctggcctccgttccccaagaggaagcttcatc
cctcaggctcacctgtatggtgctcgggacaccggcttccagcacagctacaggcgtggt
ggaggcaatgtaggacagagaaacagtgccggttggagtgactcctcccaggtgagcagc
ccagaccgggagggcaactactccctggtggactccgcccatggcgaatcactgcacagt
gttggcatggaccttactccccaggttaacccccatgcaccacacaccatgatgcatata
cccatgtacccactccaccagcctccccagcccctccgtgtggccttcacggccgcccgc
acagccaactacgtaccagggaccctggaccagcccatcgccttcgaccagctgaacagc
aacctgggtgacatgtttgacacccacctgggtcgcttcacgtgtccggccaacggcacc
tatgtcttcctctttcacatcctcaagctggcagtcaatgtaccactctacgtcaacctg
atgcgcaacgacgaggtgatggcgtcagcgtatgccaacgacgggggtccggaccatgag
actgccagtaaccactccatcttgcaactgtaccagggagaccaggtgtggctccggttg
caccgtggctccatctatggaagcagctggaagtacagcacattttctggctttctcctc
taccaggactga
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