Esox lucius (northern pike): 105020268
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Entry
105020268 CDS
T04894
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
els01001
]
105020268
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
els04121
]
105020268
Enzymes [BR:
els01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105020268
Protein kinases [BR:
els01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
105020268
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105020268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_5
PHD-1st_NSD
PML_CC
PRANC
ParB
DUF1351
Motif
Other DBs
NCBI-GeneID:
105020268
NCBI-ProteinID:
XP_012995585
LinkDB
All DBs
Position
LG23:complement(16145835..16155263)
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AA seq
1248 aa
AA seq
DB search
MDESPEAAVDNDDLVIIVENEAESLPAEEERAKQLGGSLGLMDTCPVCKLNFHNREPKLL
PCLHSFCKKCLPPPSRNLANADQQRRDPQLQADNSKPLNVIRCPVCRQECWEVEVLDNFF
VKDSVEVPSSTVEKTSQVCMSCDDKTEATGFCVECVEFLCVTCIEAHQRVKFTRDHTIRQ
KEEMSPGTILVCLISEAVGASTQKPVFCDIHKQEPLKLFCETCDRLTCRDCQLLKHKDHN
YQFLDDAYRNHRQHLENMTHQLQEKRKAIEEVSNCINNGLQQVDENRKSVTNEIKKSICN
LIMEINRKGKILVNQLEALTKDHEVGLKKQQEDVSHLTRHLDHVINFTKWATASHSGTAL
LYCKRLILCQIHYLMRANCNASIVPQSLVRFQCRSGFWASNVDLGALAVERIPGRQPSSI
QQGFPPGHPGQAGPGPRGEGPPGAFPPGSSAHQRGSTLAQLQLQVEKLAQHPNRAGQPPP
NHWSWYQQGLRLPGPGPGGPAPQRPHQGGSPSQGPPNMVQIQQPGRRYGPPGPQTHPNPR
SPTSMLQTTNFPPQSLRDLIHNSSFPPKPMDVLQGTSRYSHALPPNTGPISTQATIHQRN
MMEAAQLRRGDPSGSSSMPNPRASYAPSLATTIPDRHAQGRQNSPMSKPSSSESSAGSAS
WKRTEPQAAAPAISAKRRRRSSPGPIIIIKDEPEDDDEVSFVQSSVRASASLPDSSTGVQ
PQSLPQPQQPSPPDPGPVVEPQPEPQPEPLPRAETQVELEADPQPEPDKAPGAPDEDPNE
DWCAVCQNGGELLCCDKCPKVFHLNCHIPTLKESPSGEWFCSFCRDLTSPEMEYDPDNQG
QSPAMKEEPGSEGFPPVDKRKCERLLLRIYCNEFSTDFQEPASPSSIPEYKELIETPMDL
SIVKNRLESKESPRYSSAEEFVKDVRLIFRNCAKYYQADTEVGGAGLSLEEYFEEQLKLL
FPDRIFPGGREEGMIPPVEDEMEEGMEEDGMAPNEGDMPPVEEDLTPFEEGMPSVEKEGP
EEGPALVAGGIEEDGIPPLEESMEEGGEGTSLVKADTETSPGGVLADPSTQVSSSPITQP
SSDTPDNPSETPGNLDNPPESLDNPPESLDNPPETLDNPPETLDNPPETLDNPPETLDNP
PETPDNPSDNPDNPPETPDNPTESLDNAHDTPDNPTESLDNVPDNPTESLDNAPDTPDNP
TESLDNTPDNPTDTPDNPTETTDTSLDFNSTTENEGKTECETDKAEEE
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagcccagaagctgctgtggacaatgatgaccttgttattattgtggaaaac
gaggcagagagtttgccagctgaagaggagagagcaaaacagttaggcggtagcctaggt
ctaatggatacttgccctgtctgcaagttgaatttccacaacagagagccgaaacttcta
ccatgcctccactctttctgcaagaagtgtcttccgcccccttcaaggaacttggcaaac
gctgaccaacaacggcgagaccctcaacttcaagctgacaactcgaaaccactcaatgtt
atccgctgcccagtttgtcgacaagagtgctgggaggtggaggtgctggataacttcttt
gtgaaggactctgtggaggttcccagcagcactgtggagaagaccagtcaggtgtgtatg
agttgtgatgacaagaccgaagccacagggttctgtgtggaatgtgtggagttcttgtgt
gtaacgtgcattgaagcccaccagagggtcaagttcaccagagatcataccatacggcag
aaggaggagatgtccccaggcacaattcttgtgtgtctaatttcagaggctgtgggtgcg
tccacgcagaagccagtgttctgtgacatccacaagcaggagcccctcaagctgttctgt
gagacctgtgatcgtctcacctgcagggactgtcagctgctcaagcacaaagaccacaat
taccagtttcttgatgatgcctacagaaaccacaggcaacacctggagaacatgactcat
cagctacaggaaaagaggaaagccatagaagaagtttccaattgcattaacaatggactc
cagcaagttgatgaaaaccgcaaatctgtcaccaatgagataaagaagtccatttgcaac
ctgatcatggagatcaacagaaaggggaagatcttagtcaatcaacttgaggcactaaca
aaggaccatgaggtcggactgaagaaacagcaagaagatgtcagtcacctcaccagacat
ctggatcacgtgatcaacttcaccaagtgggccacggccagtcacagtggcacagctctc
ctgtactgcaagagattgattctttgccaaatccattacctgatgagagccaactgtaac
gcatccatcgtcccacagagcctagtccgctttcagtgtcgctccggattctgggcctca
aatgttgatcttggcgctttggcggtggagagaatcccaggtcgtcagcccagttccata
cagcagggcttccctcctggccaccctggccaggctggccctggccccagaggagagggc
cctcctggagccttccctcccggctcctctgcccaccagcgtgggagcaccttggcccag
ctccagctgcaagtagagaagctagcccaacacccaaacagggctggacagcccccaccc
aaccactggtcctggtaccagcagggactgaggctcccagggccaggaccaggaggcccc
gctccacagagaccccaccaggggggttctccgtctcagggccccccaaacatggtccag
atccagcagccaggccggaggtatggaccccctgggccccagacccatcctaaccccagg
agccccacctctatgctgcaaaccacaaacttccctcctcagtctcttagggatctcatc
cacaactccagcttccctcccaaacccatggatgtgctgcagggtacctcacgctactcg
catgcactgcctccaaacaccggacccattagcactcaagccactattcaccagcgtaac
atgatggaagctgcacagttgaggaggggtgaccccagtggatcttcatccatgcccaac
cctagagctagttacgcgccgagcctagccaccaccatccccgacagacatgctcaagga
agacagaattccccaatgtccaaaccttcctcctctgaatccagtgcagggtctgcttcc
tggaagcgcacagagcctcaggctgccgcccccgccatctcagcaaagaggaggcgcagg
tcatcccccggaccaatcatcatcatcaaggacgagccagaggacgacgacgaagtcagc
tttgtgcagtctagtgttagagcctcggccagcctgccagacagcagtacaggcgttcag
ccccagtccctgcctcagccccagcagccgtctcccccagatccgggccccgttgtggag
ccccagccagagccccagccggagcccctgccccgagcagagacccaggttgagctagaa
gctgacccacagcccgagcccgacaaggccccgggggccccggatgaggatcccaatgaa
gactggtgcgctgtgtgtcagaacgggggagaactgctctgctgcgacaaatgtcccaaa
gtcttccacctcaactgtcacatacccacacttaaagagtcccccagtggtgagtggttc
tgttccttctgtcgtgacctgaccagtcctgagatggaatatgacccagacaaccaggga
caatcaccggccatgaaggaagaacctggatcagagggattccctcctgttgataaaagg
aaatgtgagcgactcttgctccgcatctactgcaatgagttcagcacagatttccaagag
cctgcttcaccatcgtccatcccagagtataaagagttgattgagacgcctatggaccta
tccattgtgaagaacaggctggaatctaaggagagcccacgctattccagcgctgaggag
tttgtcaaggacgtcaggctcatatttaggaactgtgcgaagtattaccaggcggacaca
gaggtgggaggtgcaggacttagtctggaggagtactttgaggagcaactgaagctcctc
tttcccgataggatatttcctgggggccgagaagagggcatgataccccctgtggaggat
gagatggaagaaggcatggaagaggacgggatggctcccaacgaaggggatatgccccct
gtcgaggaagacctaacaccatttgaagaagggatgccttctgtagagaaagaaggcccg
gaagaggggccagctcttgtggcaggagggatcgaggaagacggaatacctcctttagaa
gagagcatggaggagggaggggaagggacttctctagtcaaagcagatacagaaacatca
cctggtggtgtactggcagatccatcaacacaggtttcatcatcccccatcactcagcct
tcttcagatacccctgacaacccttctgaaacccctggcaacctggacaacccacctgaa
tccctggacaacccacctgaatccctggacaacccacctgaaaccctggacaacccacct
gaaaccctggacaacccacctgaaaccctggacaacccacctgaaaccctggacaaccca
cctgaaaccccggacaacccttctgacaacccagacaaccctcctgaaaccccggacaac
cccactgagagcctggacaatgcccatgacaccccggacaaccccactgagagcctggac
aacgtcccggacaacccaacggagagcctggacaacgcccctgacaccccggacaacccc
actgagagcctggacaacacccctgacaacccaactgacaccccggacaaccccactgag
accacagacaccagcctggattttaactcaaccacagaaaatgagggcaagacggaatgt
gagacggacaaagctgaagaggaatga
DBGET
integrated database retrieval system
