Esox lucius (northern pike): 105020316
Help
Entry
105020316 CDS
T04894
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
els
Esox lucius (northern pike)
Pathway
els03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105020316 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
els03400
]
105020316 (apex1)
Enzymes [BR:
els01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
105020316 (apex1)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
105020316 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
105020316
NCBI-ProteinID:
XP_010885552
LinkDB
All DBs
Position
LG23:complement(6714086..6716783)
Genome browser
AA seq
312 aa
AA seq
DB search
MSKRGKKNVEEAGDGDQDNGTAPAAKKGKKGKEPEAPILYNDPPDKMTSTDGRAANMKIT
SWNVDGLRAWVKKKGLDWVRSEGPDVLCLQETKCAEKSLPDEITSMPEFPHKYWAGSDEK
EGYSGVAMLCKTEPLKVTYGIGKEEHDKEGRVITAEFPTFFLVTAYVPNSGRGLVRLDYR
KTWDVDFRAYLTDLDKRKPLVLCGDLNVAHEEIDLKNAKGNKKNAGFTAEEREGFGQLLA
AGFSDSFRELYPEQANAYTFWTYMMNSRSKNVGWRLDYFLLSSALLPGLCDSKIRNQAMG
SDHCPITLHLVV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagagggaaaaagaatgtggaagaggccggagatggggaccaagacaacggc
acagcacctgctgctaagaaaggaaagaaggggaaggaaccagaagcgccaattctgtac
aacgaccctcctgataagatgacaagcaccgatggacgcgctgctaacatgaagatcacc
tcctggaacgtggacgggctcagagcctgggtcaaaaagaagggcctagattgggtgcgc
agcgagggccctgatgtgctgtgcctgcaggagaccaagtgcgctgagaagtcccttccc
gacgagatcacctccatgcccgagttcccccacaagtactgggctggctcagatgagaag
gagggctatagcggggtggccatgctgtgcaagacggagcccctcaaagtcacctatggc
attggtaaggaggaacatgataaggagggccgcgtcatcaccgcagagttccccaccttc
ttcctggtcaccgcctacgtgcccaactctggtcgaggcctggtgcgcctcgactaccgc
aagacctgggacgtggacttccgggcctacttgaccgacctggacaagcgcaagcccctg
gtgttgtgcggcgatctgaacgtggcccacgaggagatcgacctgaaaaacgccaaaggc
aacaagaagaacgcgggcttcacagcggaggagcgcgagggctttggccagctgttggct
gcgggcttctctgatagcttccgtgagctgtaccctgagcaggccaacgcgtacaccttc
tggacctacatgatgaactcccgttccaagaacgtgggctggcgactggactacttcttg
ctgtcctccgctctgctgccaggcctttgcgatagcaagatcaggaaccaagctatgggc
agtgaccattgtcccataactctgcatttggtcgtgtag
DBGET
integrated database retrieval system
