Esox lucius (northern pike): 105020464
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Entry
105020464 CDS
T04894
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105020464 (chd1)
03036 Chromosome and associated proteins [BR:
els03036
]
105020464 (chd1)
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105020464 (chd1)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
105020464 (chd1)
SLIK complex
105020464 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
105020464
NCBI-ProteinID:
XP_012995750
LinkDB
All DBs
Position
LG23:4267889..4289661
Genome browser
AA seq
1821 aa
AA seq
DB search
MAGRSEEESVSNSSGESSNSDDESASGSGSGSSSSSSSSSSNSGSSLGSGSDSGSQSDSD
SEKSKKNEPENKANIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQQQSSSNSGSDSSSS
DSDDDSSSGKRRKSGSGSSSGSGSGSGSGSGSDSSAQEQERSEESDDYEPSHKVKSRKPP
TKATARNGKKSSVQRKKPSAGSSSEDNYDGKKKKKSSSSNQGPRRQATQNVSYKEDEEQK
TDSDDLVEVCGEDVPPPEEDEFETLERVMETRIGRRGATGGTTTVYAVEADGDPNVNFNP
AKEAGEQQYLIKWKGWSHIHNTWETEETLKMQNVKGMKKLDNFKKKESDKRKWIKSSSPE
DVEYFNCQQELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWEDGALI
ARKYQKSIDDYMRRNQSKTIPSRDCKVLKQRPRFIPMKKQPPYIGGDGLELRDYQLDSLN
WMAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLVSWQREIQ
LWAPLMNVVVYLGDISSRGMIRTHEWMHVQTKRLKLNILLTTYEILLKDKAFLGHVPWAF
IGVDEAHRLKNDDSLLYKTMMEFKSNHRLLITGTPLQNSLKELWSLLHFIMPDKFHSWEL
FEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQYYKWIL
TRNYKALSKGTKGSTSGFLNVMMELKKCCNHCYLIKPPEDTEYYNKQEALQHLIRSSGKL
VLLDKLLLRLRERGHRVLIFSQMVRMLDILAEYLKSRQFLFQRLDGSIKGEMRKQALDHF
NAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKRQVNIY
RLVTKSSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGTAPSSATPFNKEELSAILK
FGAEELFKEPEGEEQEPQDMDIDDILKRAETRENDPGPSTVGEELLSQFKVANFSMMEEE
EIVMDSGRHHRGWDEIIPEAQRRQMEEEERQKELEEIYLLPRMRNCAKQISFNGNESRRS
RNRRYSGSDSDSTSGRKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDA
IARDAELVDKSEFDLKRLAETVHNGCLKTLRENPCGPEKTSGGRRGKVKGPTFRISGVQV
NAKLVISHEEELAPLHKAIPADPEERKRYTIPCHSKAAHFDIDWGKEDDSSLLIGIYEYG
YGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQRQAGTA
NSRKRKPRSKKNKAVKPAKVDEVVKSPSSEPPSDKSSEEGDDIEDEKEVVPVKPPPRRSR
GERVVVKEEEEEEEDEEEEEEEPHEPEVPSPTEEDEELKEREIKKDIKKEKKEESRDVKE
KKDTKPLEPVHKVEDVSGEKPSELKAEIRDKAEVRDKAELREKPKKASDMPVHITAAGDN
VPISEESEELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHIT
ECLKEYSNPEHIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQAAEQNTSTQN
APSFKHADVERSKDNSHLDDSSRDSYSSERLHSSSRFHDHSSSKDRDSRDRHTTSDPYSR
KGGGDSRKRPYSAFSNGKDHRDYYRSDHQDSRYYSDSKHRKVDDHRSSWDGRADSKERSH
SDHRSGADYPSSHQRSSSRGDSYRYHTDWQMDHRASASGPRSPRDQRSPYDGRSPLGHRS
PFEYSSDHKSTPEQNWSSRKT
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgaagtgaagaagagagtgttagtaacagcagtggagaatcaagtaactca
gacgatgagtccgcgtctggttctgggtcgggctccagctcgagcagcagcagcagcagc
agcaattccggcagcagcttgggaagcgggtcagactccggcagccagtccgattctgac
tctgagaaatccaagaagaacgaaccggaaaacaaagccaatattgatggggccgagttt
tggaagtccaaccccagtatcctagcagtgcaaaggtcagccatgctcaggaaacagcaa
ctccagcaacagcagcagcagcagagctcttctaacagtggttcggattcctccagcagc
gattcggatgatgactcatcaagtggaaagagaagaaaatcgggttccgggtcgtcttca
gggtctgggtcggggtccgggagtggttccgggtcggactcgtcggcacaggaacaggaa
cgcagcgaagagtctgatgactatgagcccagtcacaaagtcaagagtagaaagcctccc
accaaggccaccgccagaaacgggaagaagagcagcgtgcagcggaaaaaaccctcagcg
ggctcgtcctcagaggacaactacgacggcaagaagaagaagaaatcgtcttcgtcgaac
caggggcccaggcggcaggctacgcagaacgtcagctacaaggaggacgaggagcagaag
accgactcggacgacctcgtggaggtgtgcggggaggacgttcccccgccggaggaggac
gagtttgagacactggagagggtgatggagacgcggatcgggaggagaggagcgacgggg
ggaaccaccacagtgtacgcggttgaggcagacggggaccccaacgtcaacttcaacccc
gccaaggaggcgggcgagcagcagtacctgatcaagtggaaaggctggtcccacatccac
aacacctgggagacggaggagacgctgaagatgcagaacgtcaagggcatgaagaaactg
gataacttcaagaagaaggagtcggacaagcggaaatggataaaatcatcttcacccgag
gatgtggaatatttcaactgtcaacaggagctcatggatgatctgcattcacagtatcag
ctggtggaaaggatcattggacattcaaatcagaagtcggcggccggttacccggactac
ctctgtaagtggcagggactcccgtactccgagtgcagctgggaggacggagccctcatc
gccaggaagtaccagaagagcatagacgactacatgcgcagaaaccagtccaagacaatt
ccctccagagactgcaaggtactgaaacagaggccgcggtttatacccatgaagaaacag
ccgccttacataggaggagacggtctggagctccgagattaccagttggacagcttgaac
tggatggctcactcctggtgcaagggcaacagctgcatactggctgacgagatgggcctg
gggaagaccatccagaccatctccttcctcaactacctgttccacgaacaccagctctac
ggccccttcctgctggtggtgcccctgtccacgctcgtctcctggcagagggagatccag
ctttgggccccactcatgaacgtggtggtctacctgggcgatatcagcagtcggggcatg
atccgtacgcatgagtggatgcacgttcagaccaaaaggctcaagttaaacatcctgcta
acgacgtatgaaattctcctgaaagataaggcattcctgggtcatgtgccgtgggctttt
atcggcgtggacgaggcccatcgactgaagaacgacgattcgctgctctacaagaccatg
atggagttcaagtccaaccaccggctgctgatcacaggaacgccgctccagaactccctg
aaagagctctggtccctgttgcatttcatcatgcctgacaagttccactcgtgggagttg
tttgaggaggaacatggcaagggcagggactccggctacaccagtctgcacaaggagctg
gaaccgtttctcctgcggcgagtcaagaaggacgtggagaagtctctacccgctaaagtg
gagcagatactccgagtggagatgagtgccatccagaaacagtactacaagtggatcctg
acgaggaactacaaggctctcagtaaaggcaccaagggaagtacgtcaggctttctgaat
gtcatgatggagctgaagaagtgctgcaaccactgttacctcatcaagccccccgaggac
acggagtactacaacaaacaggaggccttacagcacctcatccggagcagcggaaagctg
gtgctgctggacaagttgctgttgcgcctgagggagcgaggccaccgcgtgctcatcttc
tcccagatggtccggatgctggacatcctggccgagtatctgaagagccgccagttcctc
ttccagagattggacggctccattaagggggagatgaggaaacaggctttggaccatttc
aatgctgagggctctgaggacttctgtttcctgttgtctacgcgggcgggcggtttgggc
atcaacctggcatcggccgacacagtggttatcttcgactcggactggaacccccagaac
gacctgcaggcccaggccagagcccacaggattggccagaagagacaggtgaatatctac
cgcctggtgactaagagctctgtggaggaggagatcattgagagggccaagaagaagatg
gtcctggatcatctggtcattcagaggatggacaccactggcaagacggtccttcacact
ggcactgctccttccagtgccaccccattcaacaaggaggagctgtctgccattttgaag
tttggtgctgaggagctgttcaaggagccagagggagaggaacaagagccccaggatatg
gacattgatgacatcctgaagagggcagagaccagggagaatgaccctggaccttccacc
gtgggggaggagctgctctcgcaattcaaggtggccaacttctccatgatggaggaggag
gagatcgttatggactcaggccgccaccaccggggctgggatgaaatcatcccggaggcg
cagcgacgtcagatggaggaggaggagaggcaaaaggagctggaggagatctacctgctg
ccacgcatgaggaactgtgccaaacagatcagctttaacggcaacgagagccggcgaagt
agaaaccggaggtactctggctctgacagcgattccacctcgggtcgcaagaggcccaag
aaacgaggtcggccccggaccattccaagagagaacatcaagggcttcagcgatgctgag
attcgaagattcatcaagagctacaaaaagtttggtggaccactagagaggctggatgct
atcgcccgcgacgctgagctggtggataaatctgagtttgacctgaaacgcctcgcagag
acagttcacaatggttgcctgaagactctcagggagaacccctgtgggccggagaagaca
tctgggggcagaagagggaaagtaaaaggtcctaccttcaggatctctggcgtccaggtg
aacgccaagctggtcatctcccacgaggaggagctggcccccctgcacaaagccattcct
gctgacccagaggagaggaaaaggtacacgattccgtgccactccaaagcggcgcacttc
gacatcgactgggggaaggaggatgactccagtctgctcataggaatctatgaatacggt
tacggcagctgggagatgattaagatggaccccgacctcaatctgacacacaagctctta
ccagacgaccccgacaagaagccccaggcaaagcagttgcagaccagggcggactacctc
atcaagttgctgagcaaagacctggcgaagaaggaggcccagaggcaggccgggacggcc
aattcacgcaagaggaaaccgaggagtaagaagaacaaagcggtgaagccggccaaggtg
gatgaagtggtgaagagtccgtcctctgagcccccctcggataagtcctcagaagagggg
gacgacatcgaggacgagaaggaggtggtcccggtgaagccgccacccagaaggagcaga
ggggagcgtgtcgtggtgaaggaggaggaagaagaggaggaagacgaagaggaggaggag
gaggagccgcatgagccagaggtgccctcgcccaccgaggaggacgaggaactcaaagaa
agggagatcaagaaggatattaaaaaggagaagaaagaggagagccgagatgtgaaggag
aagaaggatacgaaacctttggagccagtacacaaagtagaggatgtctctggggagaag
ccgagtgaactgaaggcggagatacgggacaaggcggaggtacgagacaaggcggagcta
cgggagaagccaaagaaggcctccgacatgccggtccacatcacggccgctggagataac
gtgcccatctccgaggagtccgaggaactcgaccagaaaaccttcagtgtgtgcaaggag
aggatgcggccggtgaaggcagctctgaaacagctggaccgcccggagaagggcctgtcg
gagcgggaacagctggagcacacgcgccagtgcctgatcaagatcggagaccacatcacg
gagtgtctcaaggagtactccaacccggagcatatcaagcagtggaggaaaaacctgtgg
atatttgtttcaaagttcaccgaatttgatgcaagaaaattgcataagttgtataagcac
gcaatcaagaaaaggcaggagaacgcccaggcagcagagcagaacactagcactcaaaat
gcccccagctttaaacatgcagacgtcgagaggtcgaaggacaactctcacctggatgac
agcagcagggacagctacagctccgagaggctccactcgtcgtcacgcttccacgaccac
agcagcagcaaagaccgggacagcagggacagacacacgacctccgacccctacagcagg
aaaggcgggggggactcccggaaaagaccgtactccgccttcagcaacggcaaagaccat
cgagattactaccgctctgaccaccaggacagcaggtactacagtgacagcaagcacagg
aaggtggacgatcaccggtccagctgggatggacgcgcagacagcaaggagcgctcccac
tcggaccaccgctccggcgccgactacccgtccagccaccagaggtcgtcgtcccgaggc
gactcctaccggtaccacacggactggcagatggaccaccgggcgtcggccagtgggccg
cgttcgccacgcgaccagcgctcgccctacgacggccgctcgccactgggccaccggtcg
cccttcgagtactcgtcggaccacaagagcacgccggagcagaactggagcagccgcaag
acataa
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integrated database retrieval system
