Esox lucius (northern pike): 105020625
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Entry
105020625 CDS
T04894
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X2
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
els
Esox lucius (northern pike)
Pathway
els02010
ABC transporters
els04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105020625
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105020625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
els02000
]
105020625
Transporters [BR:
els02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
105020625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
105020625
NCBI-ProteinID:
XP_010886102
LinkDB
All DBs
Position
LG24:12968558..13141682
Genome browser
AA seq
2248 aa
AA seq
DB search
MGLLTQLGLLLWKNFTLRKRQKVRLVVELLWPLFLFVILVWVRSTTEPIYRDQCHYRNKP
MPSAGLLPWLQGMVCNLNNPCVKNPTPGEAPGQVNNFNNSLIAGVLIELQSLLASTSIRA
NVRRLSDDLDQWTSIRQTFNPANGKPIPLKSILTDNETFTAYLKENLSVPQTVTDSLMTS
HIRLNEITGLSTQDNLKNSLCNGTTLDRYVEFTSVSDKEAFQNVSCSITVQKMRQTRDVF
LQNLDMRNIPTSLLLALNPAGSSELAAKTTKDALPVIKELTKLQNSMLFKASYMLDFKGD
AFGSLNKLLCGTVPDSNSTNATLKFPSSGASNKSLDRSSNSSAFCKALIDTLEGTPGLRV
VWSTFRPLIKGKVLYTPDTPATRILVKEANRTFSTLATLKELAEAWEVFEPRVWNYFQNG
HQVNTLRALLKNPVFAAALNQQLQGTRWTPELLANFLYNGAPEDRPLGMPPNDWRDIFNA
VSQILDLLKKFIGCLDLDKFQAVDSEGHLVSRALDLLDNNTYWAGIVFQDLNVAASRPPP
YVKYKIRMDIEEAERTDKIRERGWTPGARDNSFSDMRYVWGGFAYLQDMMDHAIIRVHTS
KSKPLGVFAQQMPYPCYVDDVFLRSLARSLPLYMTLAWIYSVAMIVKGIVVEKEARLKET
VRMMGLRSAAYWLSWVVSSVLPLAVSALLLTLILKYGKVLQYSDPSLIFVFLLVFCVATI
MECFLISVFFSKANLAAACGGLIYFVLYLPYLLCYAWKDVMGFQAKVAVSLLSCVAFGYG
CENLAMYEEQGVGIQWSNMAHNPEGDRHTFAVSIIMMLVDAFIYWLLTCYIENVFPGQYG
IPKPWYFLFTASYWCNKSVVPSADPSQFNDPMEYNDYLERPPVNMKAGVSIRNLVKIYKT
GKKLAVDGLSVDFYENNITSFLGHNGAGKTTTMSILTGLFAPTSGTAIINGYDICTDMDT
IRKHLGMCPQHNVLFNDLTVEEHIYFYARLKGRSRDEVKTEMEQMIKDVGLPHKRKELAK
NLSGGMQRKLSVAIAFVGGSSIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTHHM
DEADILGDRIAIISHGKMCCYGSSLFLKKYFGSGYYLTLVKAGDYQMANERSGIHQGQVN
DKKVTDDSRAASVDEGIASQTWSNADPTELTAVSKLVRRHVPEAVFLESIGQEITYILPY
SGAKDGTFALLFKELDLEMADIGITNYGISDTTLEEIFLKVAEKTGVDVEMPAAPLERGK
TRISWDSRCQRRSFTDVGNTSDEVPGKSAEVKAKFTSRVDDAEQAAKAKEKGSSVITGWE
LIRRQFLALFIKRFHHARRSRKGLIAQVILPAVFVCLSLVFSIIVPPFAFYPNLEMQPWM
YGLPQTTFYSNDGPPNNMEVARVADSLVNNPGFGTRCMANNPILSLPCVPKNSDWFTPQV
DPSVSDIFINGNWSMADPSPNCQCSTPTKTTMLPDCPPGAGGLPPPQRTQNTTDLLQDLT
GRNMTDFLLKTYEKAGKKRYGGISVGGVNSQVRMTEPEIEAVITDLKSLFNSSQDNTTDQ
ILLNGETLLKELGTRDNVKVWFYNKAWHAIVSFINVANNAILRGNLPAGRNPRDYGISTS
SHPLNLTKGQLSYQALAATSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSG
VNPTVYWVANFAWDICNYIVPCLIVIIIFLCFQQKAYVSPPNLPALILLLVMYGWSITPM
MYPASFIFSVPSTAYVVLTCINLFIGINGSVATFVMELFDDEKIKSINNIVKQVLLIFPH
FCLGRGLIDMGKNQAMATLYESFGENRFQDPLSWDMVGKNLCAMSIQGAVMFAITILIQY
KFCYKPRLISGAPVSQVDEDVDVARERARVHQGGADEDLLRICDLSKVYSGKKIPAVDRV
CVGVPAAECFGLLGINGAGKTTTFKMLTGDIAVSGGEAFLNGYSIRTEMRDVHQNMGYCP
QFDALNDLLTGREHLEFYARLRGVPEKEVPMVAEWGIQKLGLVKYSNKAAGTYSGGNKRK
LSTAMALIGCPPVVFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCT
RMAIMVNGQFKCLGSIQHLKSRFGEGYTVIVRVGGSPPALGPVEEFVDKTFPGSVLKEKH
HNTLQYQLPHGEGALASIFSQFSTHQLRLGVEDYSVAQTTLDQVFVNFAKYQHEEDSLAS
HAFDNNVDTSDEMPLRTRNSTDTVPLRV
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacacagcttggtcttctcctgtggaagaacttcactcttcggaagaga
caaaaggtgcgtcttgtggtcgagttgctgtggcctctcttcctgttcgtcatcctcgtt
tgggtgagatctaccactgaacccatttaccgggatcaatgtcattatcgaaataaaccc
atgccctctgctgggttgctgccctggcttcaaggaatggtgtgtaacctaaacaaccca
tgtgtaaagaatcccacgccaggagaagcaccaggacaagtcaacaacttcaacaattct
ctaattgctggagtgttgatcgagctgcagtcacttttggccagcacatccatccgagcc
aatgtccgcaggctttcggatgatttggaccagtggacgtcgatccggcagacattcaac
cctgcgaatggtaagcccattcctctgaaaagtatcctgactgacaatgaaacgttcact
gcatatctgaaggagaacttgtccgtgccacagacggtcacagacagtctcatgacctcg
catatacgcctgaatgagataacaggcctttctacccaagacaacctgaagaacagcctt
tgcaatggaacaactcttgatagatatgtggagttcaccagcgtctctgacaaagaagct
tttcagaatgtcagctgctcaattacagtacaaaagatgagacaaaccagggacgttttc
ctgcaaaacctggacatgcgaaatattcccaccagtttactgttggcattgaatccggca
gggtcatctgaattagcagcaaaaacgacaaaggacgcacttcctgtgattaaagagctg
acaaagttacagaactcaatgctgttcaaggcctcatatatgctggactttaaaggggat
gcctttggtagtctgaacaagctactatgcgggacagtaccagactccaactccacgaac
gccaccctgaagttcccttcttctggagccagcaataagtcactggacaggagcagtaat
tccagtgccttctgcaaagctttgattgacacactcgagggaacgcctgggcttcgggtt
gtctggagcactttcaggcctctgatcaaggggaaggtgctctacacaccagacacacct
gccactagaatactggtcaaagaggcaaaccgcacattcagcacgctggccacgctgaaa
gagctggcggaagcttgggaagttttcgaaccaagggtttggaactactttcaaaatggc
caccaagtcaatacactgcgggccttgcttaagaacccagtgttcgcagcggcgctcaac
cagcagctccaaggcacaagatggacgccagaactgctcgccaacttcctgtacaacggg
gcccctgaggaccgccccttgggcatgccaccgaatgactggcgtgacatattcaacgcc
gtcagtcaaatcctggacctcctgaaaaagttcattgggtgcctggacctggataagttt
caggctgtcgacagtgaggggcatcttgtgtctagagccttggacctcctcgacaacaat
acgtactgggccggaatcgtattccaagacctcaacgtggccgccagccgacctcctccg
tacgttaagtacaagatccgtatggatatcgaggaggccgagcggactgataagatcaga
gaaagggggtggacccccggggcacgggacaactccttcagcgacatgcgttacgtgtgg
ggaggcttcgcctacctgcaggacatgatggaccacgccattatacgggtgcacaccagc
aaatccaaacctctaggcgtgtttgcccagcaaatgccgtatccctgctacgtggacgac
gtgttcctccgctcgctggcacgctctctgccgctgtacatgaccctggcttggatctac
tcggtggccatgatcgtgaagggcatcgtcgtggagaaggaggcgcggctgaaggagact
gtgaggatgatgggtctgaggagcgccgcctactggctgagctgggtggtgtccagtgta
ctcccgctggccgtcagcgctctcctcctgaccctcatcctcaagtatggaaaagttctg
cagtacagcgacccctccctaatcttcgtcttcctgctggtcttctgcgtggccaccatc
atggagtgtttcctcatcagcgtcttcttctccaaagccaacctggcggccgcgtgtgga
ggcctcatctactttgttctgtacctgccgtacctcctctgttacgcctggaaggatgtc
atgggcttccaggctaaagtagctgtgagcttgctttcgtgtgtggccttcgggtacggc
tgtgagaacctcgccatgtacgaggagcagggtgtcggcatccagtggagcaacatggcc
cacaatccggaaggagaccgtcacaccttcgctgtgtccatcatcatgatgctggtcgac
gccttcatctactggctgctcacgtgctacatcgagaacgtctttccaggccagtatgga
ataccaaagccgtggtacttcctgttcacagcctcctactggtgcaacaagtctgtggtt
cccagtgctgaccctagtcaattcaatgaccctatggaatacaatgattatttggaaagg
cctccagtcaatatgaaagccggggtctccatcaggaaccttgtgaagatctataagact
gggaaaaagcttgctgtggatggccttagtgttgacttctatgaaaataacatcacctct
ttcctgggtcataacggggcaggaaaaacaaccaccatgtcaatcctgactggactcttt
gctccaacatcggggactgctataataaatggttatgacatctgcactgacatggacacc
attaggaagcatctgggaatgtgccctcagcataatgtcttattcaatgacctgacagtg
gaggaacacatctacttctacgccagattaaaggggcgaagccgagatgaagtgaagacg
gagatggaacaaatgatcaaggatgttggtctgccgcacaaacgcaaagagcttgccaag
aacctgtcagggggaatgcagaggaaactgtcggtggccatcgcattcgtgggaggatcc
agcatcgtcatcctggatgaacccacagcgggagtggacccatacgcccggagggggatt
tgggaactactgctgaagtacaaacaaggtcgcaccatcatcctctccactcatcatatg
gatgaggcagacatcttgggagaccgcattgccattatctctcacggcaagatgtgttgt
tacggctcctccctattcctgaagaagtactttggcagtggctactacctcaccctagtt
aaggctggagattatcaaatggccaacgagcgcagtggaatccatcagggccaagtgaac
gataaaaaggtgaccgatgattcaagggcagccagtgtggatgaagggatcgcaagtcaa
acctggagcaacgccgacccgacagagctaaccgctgtcagtaagctggtgcgacggcat
gttcctgaggcggtgttcctggagagcatcggccaggagatcacctacatcctgccctac
agcggcgccaaggatggcacctttgctctcctcttcaaagagctggacctagagatggcc
gacattggcatcaccaactatggcatctccgataccaccctagaggagattttcctaaaa
gtggcagaaaaaacaggtgtagatgtggaaatgccagctgcacctttggaaagaggcaag
acaagaatttcgtgggactcaaggtgtcaacggcgaagcttcactgatgtcgggaacact
tcagacgaggtgccgggcaaaagtgctgaggtgaaagcgaagttcacgagccgggtcgat
gacgcagaacaagcagccaaggcgaaagagaagggctccagcgtgatcacgggatgggaa
ctgatccggagacagttcctggccctgttcattaaacgtttccaccacgcgcgtaggagc
cgcaaaggcctcattgcgcaggtgatcctgcctgcggtctttgtctgcctgtccctggtc
ttctccatcatcgtccctccttttgccttctaccccaacctggagatgcagccttggatg
tacggacttccccaaacgacattttacagcaatgatggaccgccaaataatatggaggtg
gctcgcgtggcggactcgttggtgaataaccccgggtttgggactcgctgcatggctaac
aacccaatactgagtctcccgtgtgtcccgaagaactcggactggttcactccccaagtg
gatccctctgtcagcgacatctttatcaatgggaactggagcatggccgatccctcccct
aattgccagtgcagcacgccaacaaagaccacgatgttgcccgattgtccacctggagcc
gggggcttgcccccacctcagaggacccagaatacaacagacctgctgcaggacctgacg
ggcaggaacatgactgacttcctcttgaagacctacgagaaagcaggcaagaaaaggtac
ggagggatttccgtcggaggagtcaactcccaagtcagaatgactgaaccggaaattgaa
gctgtgatcacggatttgaaaagcctgttcaattcctcccaggataacacaacagatcag
atcctcctcaacggcgagacactcctgaaagagctcgggacacgggataatgtcaaggtg
tggttctacaacaaggcatggcacgccatcgtgtccttcatcaacgtggccaataacgcc
atcctgaggggcaacctgccagcgggtcgcaaccccagggactatggcatttccacgtcc
agccaccccctcaacctcaccaaggggcagctctcctaccaggcgctggccgccacctcc
accgacgttgtggtgtccatctgtgtcatctttgccatgtctttcatcccagcgagcttc
gtcctcttcctcatccaggagcgtgtcagcaaggccaagcacctgcagtttgtcagcggg
gtcaaccccaccgtctactgggtggccaacttcgcctgggatatatgcaactacatagtc
ccgtgtctgatagtcatcatcatcttcctgtgcttccaacaaaaagcctatgtgtcccct
cctaacctaccagctttgattctgcttcttgtaatgtacgggtggtccatcacgcccatg
atgtacccagcatcgtttatcttcagcgtacccagcacggcatacgtggttctcacctgc
atcaacctcttcatcggcatcaatgggagcgttgccaccttcgtcatggagcttttcgat
gatgagaaaatcaagagcatcaacaacatcgtgaagcaggtgctgctgatttttccgcac
ttctgtcttggacgaggtctcatcgacatgggaaagaaccaggccatggccaccctgtac
gaaagttttggggaaaaccgtttccaggaccccctcagctgggacatggttggcaagaac
ctgtgtgccatgtccatccagggggctgtaatgtttgccattactatcctcatccagtac
aagttctgctacaaacccagattgatttctggagcgcccgtttcccaggtggatgaagat
gtggacgtggcccgggaacgtgcccgtgtgcatcaaggtggtgcggacgaagacttgctg
aggatctgtgatctctctaaggtgtactccgggaagaagattcctgctgtggacagggtg
tgtgtgggcgttccagccgcggagtgcttcggactgctggggattaatggcgcaggaaaa
accaccaccttcaagatgctgacgggagacatcgccgtctctggaggggaggctttccta
aatggatacagcatacggacagagatgagggacgttcaccagaacatgggctactgccca
cagtttgacgccctgaacgaccttctcaccggacgagagcatctggagttttatgccaga
ctacgaggcgtacccgagaaggaagtccctatggtggcagagtggggcatccagaagctt
ggcctggtcaaatattccaataaggcagcaggcacctatagcggtgggaacaagcgcaag
ctgtccaccgccatggctctgattggctgtcctcctgtagtctttctggatgagccaacg
acagggatggaccccaaggccagacgctttctgtgggactgcatcctgagtgtcatcaaa
gagggacgctcagtcattctaacgtcacacagcatggaggagtgtgaggcactgtgcaca
cgcatggccatcatggtgaatgggcagttcaagtgtctgggcagcattcagcatctcaag
agcaggttcggggaaggctacaccgtcatcgttagagtgggcggctcgcctcccgctctg
ggtcctgtggaggagtttgtggacaagaccttcccggggagtgtactcaaggagaagcac
cacaacaccctgcagtatcagctcccgcacggcgagggcgctctggccagcatcttcagc
cagttcagcactcatcagctgaggctgggcgtggaagactactctgtcgcccagaccacg
ctggaccaggtctttgtcaactttgcaaagtaccaacatgaggaggacagcctggcatcg
cacgcttttgacaacaatgtggacacatcggacgaaatgccattgcgaacacggaactca
acagacactgtcccgttgagggtctga
DBGET
integrated database retrieval system
