Esox lucius (northern pike): 105020935
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Entry
105020935 CDS
T04894
Symbol
lsm6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
els
Esox lucius (northern pike)
Pathway
els03018
RNA degradation
els03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105020935 (lsm6)
09123 Folding, sorting and degradation
03018 RNA degradation
105020935 (lsm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105020935 (lsm6)
03041 Spliceosome [BR:
els03041
]
105020935 (lsm6)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105020935 (lsm6)
mRNA degradation factors
5'-3' decay
Lsm complex
105020935 (lsm6)
Spliceosome [BR:
els03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105020935 (lsm6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
105020935
NCBI-ProteinID:
XP_010886603
UniProt:
C1BYP5
LinkDB
All DBs
Position
LG25:complement(7828294..7829772)
Genome browser
AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAVEQTEEYVNGQLKNKY
GDAFLRGNNVLYISTQKRKM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcaggaagcagaccccgagtgacttcttgaagcagatcattggcagaccagtt
gtagtcaaactcaactcgggagtggattaccgaggtgtcctagcctgtctcgatggctac
atgaacattgcagtggagcagactgaggagtacgtcaacggccagctgaaaaataaatat
ggagatgcctttctgagaggaaacaatgtgctgtacataagcacccagaagaggaagatg
tga
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