Esox lucius (northern pike): 105020946
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Entry
105020946 CDS
T04894
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
els
Esox lucius (northern pike)
Pathway
els03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105020946 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105020946 (smarca5)
03036 Chromosome and associated proteins [BR:
els03036
]
105020946 (smarca5)
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
105020946 (smarca5)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
105020946 (smarca5)
RSF complex
105020946 (smarca5)
WICH complex
105020946 (smarca5)
B-WICH complex
105020946 (smarca5)
NORC complex
105020946 (smarca5)
BRF complex
105020946 (smarca5)
NuRF complex (fruit fly)
105020946 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
ERCC3_RAD25_C
AAA_14
Motif
Other DBs
NCBI-GeneID:
105020946
NCBI-ProteinID:
XP_028974104
LinkDB
All DBs
Position
LG25:complement(8152750..8161152)
Genome browser
AA seq
1024 aa
AA seq
DB search
MSETENGVEPREEQAAELEETGGVEEKDDASEASKEESSEDPSSSIAPAYEEKVASDRTN
RFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRPRVKKDEKQNLLSAGDNRHRRTEQEE
DEELLSESSKTTAVCTRFDESPSYVKGGTMRDYQIRGLNWLISLYENGINGILADEMGLG
KTLQTISLLGYMKHYRSIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAVCLIGDREQRNAM
IRDVMLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTT
NRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVERLHTVLRP
FLLRRIKNEVEKSLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNVL
MQLRKCCNHPYLFDGAEPGPPYTTDLHLAVNSGKMAVLDKLLPKMKAQGSRVLIFSQMTR
MLDILEDYCMWRNYGYCRLDGQTPHEERQISINAYNEENSTKFIFMLSTRAGGLGINLAT
ADVVILYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITENTVEERIVERAEMKLQLDSI
VIQQGRLVDPNANKLGKDEMLSIIRHGATHVFASKESEITDDDIDEILERGEKKTMEMKE
KMNTMGESSLRNFTMESEGSVYTFEGEDYREKKKVITNWIEPPKRERKANYAVDAYFREA
LRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKVPRNPELPNSAQ
HQKEEQAKIDEAEALTEEELEEKENLLSQGFTIWNKRDFNQFIKANEKWGRDDIENIARE
VEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDSKIGRYKAP
FHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFEKESVYDELRQCIRNSPQFRFDWFLKS
RTAMELQRRCNTLITLIERENMELEEREKAEKKKKGPRSQSSAQKRKSDGTPDQRGGRRK
KLKL
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagactgaaaacggcgtggagccgcgggaagagcaagccgctgaacttgaagaa
actggaggggtggaggagaaggatgatgcctcagaggccagtaaggaagagtcttccgaa
gacccctcttcatccattgcgcctgcctacgaagagaaagtggcatcagaccggaccaac
cgatttgagtacctacttaagcagaccgaggtgtttgcccatttcatccaaccggcggcc
cagaaaaccccaacctccccgctcaagatgaagcctggacgcccacgtgtcaagaaggat
gagaaacagaacttgctctcggcgggagataaccgtcatcgtcgcacagagcaggaagaa
gatgaagagctgctcagcgagagcagcaagaccaccgctgtctgcacacgcttcgacgaa
tccccctcctatgtcaaggggggtacgatgagagactaccagatccgcggtcttaactgg
cttatatcgctctatgagaatggaatcaacggaatcctcgctgatgaaatgggtttgggt
aagaccctgcagaccatctctctgctggggtacatgaagcactaccggagcatccccggg
ccccacatggtgctggtgcccaagtccaccctgtacaactggatgaacgagttcaagcgc
tgggtgccctccctccgagcggtgtgcctcatcggagaccgggagcagaggaatgccatg
atcagagatgttatgttgcccggggagtgggatgtgtgcgtcacctcctacgagatgctc
atcatcgagaaggcagtgttcaagaagttcaactggagatatctggtcattgacgaggcc
cacaggatcaagaacgagaagtcaaagctgtctgagatagtgcgcgagttcaagaccacc
aaccgtctgctgctgactggaacgcctctgcagaacaacctccacgagctctgggccctg
ctcaacttcctgttgccagacgtcttcaactcctcagaggactttgactcttggtttgac
acaaacaactgcctgggcgatcagaagttggtggagcgtcttcacactgtactgcgtcct
ttcctgctgcgtcgtatcaaaaacgaagtggagaagtccctgctgcctaagaaagagatc
aagatgtacgtgggcctgagcaagatgcagcgagaatggtacacgaagatcctgatgaag
gacatagacatcctgaactctgcggggaagatggacaagatgaggctgctcaacgttctg
atgcagctgaggaagtgctgcaaccacccgtacctcttcgacggggccgagcccggcccg
ccctacaccaccgacctgcacctggcggtcaacagcggcaagatggccgtgctcgacaag
ctgctgcccaagatgaaggcccagggctcccgggtgttgatcttcagccagatgaccagg
atgctggacatcttggaggactactgcatgtggcgtaactatggctactgtcgcctggac
ggacagacgccccacgaagagagacagatctccatcaacgcgtacaacgaggagaacagt
acgaagttcatcttcatgctgagcaccagggccggaggtctgggcattaacctggccaca
gccgacgtggttatcctctacgactctgactggaaccctcaggttgacctgcaggccatg
gaccgagctcacaggattggtcaaaagaagcaggtgcgtgtgttccgattcatcacggag
aacacggtggaggagaggatcgtggagcgggcagagatgaagctacaactggactcaatc
gtcatccagcaaggaaggctagtggatcccaatgccaacaaactgggtaaggacgagatg
ttgtccatcatccggcacggcgccacgcacgtcttcgcctccaaggagagtgaaatcacg
gatgacgacattgacgagattctggagcgcggcgagaaaaagaccatggagatgaaggag
aagatgaacaccatgggcgagagctccctgaggaacttcaccatggagtcggagggcagc
gtgtacaccttcgaaggggaggactaccgggagaagaagaaggtgatcaccaactggatc
gagccccccaagagggagaggaaggccaactacgccgtggacgcctacttcagagaggcc
ctgcgcgtcagcgagcccaaagcacccaaggctcctcgtcctcctaagcagcccaatgta
caggacttccagttcttccccccaaggctgtttgaacttttggagaaagagatcctgttc
tacaggaagaccatcggctacaaggtccctcgtaatcccgagctgcccaactcggcccag
caccagaaggaagagcaggccaagatcgacgaggctgaggccctcacagaggaggagctg
gaggagaaggagaacctcctttcgcagggcttcaccatttggaacaagcgtgactttaac
cagttcatcaaagcaaacgagaagtggggcagagatgacattgagaacatcgccagggag
gtggaggggaaaaccccagaggaggtcatggagtattcagctgtgttctgggagcgctgc
aatgaactgcaggacatcgagaagatcatggctcaaatcgagagaggagaggcccgcatc
cagagaagaatcagcatcaagaaggccctggactcaaagattggtcgctacaaggccccg
ttccaccagttgcggatctcctacggcaccaacaaggggaagaactacaccgaggaggag
gaccgcttcctcatctgcatgctccacaagctgggcttcgagaaggagtccgtctacgac
gagctgcgtcagtgcatccgcaactcgccgcagttccgcttcgactggttcctcaagtcc
cggacagccatggagctacagaggaggtgcaacaccttaatcacgctaatcgagcgagaa
aacatggagctggaggaacgagagaaggcagagaagaagaaaaaagggccacggagtcag
tcttcggctcaaaaacgcaagagtgacgggacaccggaccagcgaggaggacggaggaaa
aaactaaagctgtga
DBGET
integrated database retrieval system
