Esox lucius (northern pike): 105021099
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Entry
105021099 CDS
T04894
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105021099
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
els03310
]
105021099
Transcription factors [BR:
els03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105021099
Nuclear receptors [BR:
els03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
105021099
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105021099
NCBI-ProteinID:
XP_010886873
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Position
LG02:complement(3830339..4002679)
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AA seq
537 aa
AA seq
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MEINMESIPDPSASDPGNSVSEPATPVMDTPANLEIIGTDDHHQTPVSRQSCSSSNKGLT
SAKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLID
RTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQAQQQQRDHHPH
QTPGEAEPLSPPYGLTSSGLTDLHEDLGGYMENHSPDGSSAASKGGSDSGGGGLGGFYLD
IQPSPDQSGLDINGIKPEPLCDYGSNQGFFPYCSFANGETSPTVSMAELEHLGQNISKSH
QETCQYLREELQSMTWQAFLQDEIETYQSKPEEVMWQLCAIKITEAIQYVVEFAKRIDGF
MELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNSTVYFDGKYAGPDVFKALGCDDLISSVF
EFGKGMCAMHLSEEEIALFSAYVLMSADRTWLQEKLKVEKLQQKIQLALQHVLQKNGRED
VVLTKLICKVSTLRALVSRHTEKLTAFKATYPDIVRGHFPPLYKELFGSDFEQGSMT
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggagattaatatggagtcaataccggacccttctgccagcgacccgggaaacagcgtc
tccgagccggctaccccagtcatggacaccccggcaaacctggagatcatcggaacggac
gaccatcaccaaacccctgttagtagacagagttgttccagctccaacaaaggtttgaca
tcagctaagaagactcatacatctcaaattgaaattattccttgtaagatatgtggagat
aaatcgtccggcatccactacggggtgatcacctgcgaaggctgcaagggtttcttcagg
aggagccagcagagtaatgccgcgtactcctgccctcgtcagaagaactgtctcattgac
aggaccagcagaaaccgctgccagcactgtagactacagaaatgcctggctgtggggatg
tcgcgagacgccgtgaagtttggccgcatgtccaagaagcagagagacagcctgtacgcc
gaagtccagaagcaccgccttcagcaggcccagcagcagcagagagaccaccacccccac
cagaccccgggggaggccgagcccctctctcccccctacggcctcacctccagcggcctc
acggacctccacgaagacctagggggctacatggagaatcacagcccagacggaagctcc
gcggcctccaaggggggctccgactcgggaggagggggcctgggggggttctacctggac
attcagccgtcccctgaccagtctggtctcgatatcaacggtataaaaccagagcctctg
tgtgattatggttccaaccagggtttcttcccatactgttccttcgccaacggagagacg
tctcccacagtctcaatggctgagctagagcacctgggtcagaacatctccaagtcccac
caggagacctgtcagtacctgagggaggagctacagagcatgacctggcaggccttcctt
caggacgaaatagagacctaccagagcaagcctgaggaggtgatgtggcagctttgtgcc
atcaagataaccgaggctatacagtacgtggtggagtttgccaaacgcatcgacggcttc
atggagctctgccagaacgaccagatagtgctgctcaaagcaggttctctggaggtggtc
ttcatcaggatgtgtcgagcctttgactctcagaacagcactgtctacttcgatgggaag
tacgctggaccggacgtcttcaaagcattaggttgcgatgacttgatcagctccgtcttt
gagtttgggaaggggatgtgtgccatgcacctctccgaggaagagatagccctgttctcc
gcgtacgttctgatgtctgcagatcggacatggcttcaggagaaattaaaggtggagaag
ctccagcagaagatccagctggccctccaacatgtcctccagaagaacggcagagaggat
gtggttctcacgaagttgatatgcaaagtgtcgaccctccgggcgttagtcagccggcac
acggagaagctgactgccttcaaagcaacatacccagacatcgtccgaggccacttccca
ccgctgtacaaggagctgtttggctcggacttcgaacagggctctatgacatag
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