Esox lucius (northern pike): 105021502
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Entry
105021502 CDS
T04894
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
els
Esox lucius (northern pike)
Pathway
els03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105021502 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105021502 (taf5l)
03036 Chromosome and associated proteins [BR:
els03036
]
105021502 (taf5l)
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105021502 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
105021502 (taf5l)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105021502 (taf5l)
STAGA complex
105021502 (taf5l)
TFTC complex
105021502 (taf5l)
SAGA complex
105021502 (taf5l)
SLIK complex
105021502 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD40_like
PEP5_VPS11_N
PROPPIN
WD_LRWD1
Beta-prop_DCAF12
TRIP13_N
Beta-prop_ELP1_1st
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
105021502
NCBI-ProteinID:
XP_010887535
LinkDB
All DBs
Position
LG09:18506368..18510682
Genome browser
AA seq
595 aa
AA seq
DB search
MKRGRTEQIQHTVAQYLKRRQYVDTESSLKGVKLSQSAEEMAANITVQTESGCPNIVSAA
PCQADPQQYETQFSRLRNFLSEAEVPWGQEVSCILFPLFVYLHLGMVRCSLKGAVDGFYS
RFHGLFLGEAEQRSTVEQLRHVLTQQDVATNPKLLAFLDHKYVVHLTEPAYSYLLRYLQS
EDNSALCRALGTHIQVEVTSSPRTDYQLYGTASAGAASAAAADGPEGGKAAGVEVPAGVP
QSEAALEALQDSIRRVREGPPSLTTMCFYAFQHTERLLNTAEVSADSRLLAAGFDSSAVK
LWSLRARKLKARSHRADVSRIRLSCDVLEEAEEEDGSGSEIKTLRGHSGPVFRTAFLTDS
SGLLSCSEDTTVRYWDLCSFTNTALYQGHAYPVWDVDVSPCSLYFASGSHDRTARLWTFS
RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRGPVLSV
AFAPNGKYLASAGEDQRVKLWDLASGALVKDLRGHTDSITSLSFSPDSSLVASSSMDNSV
RVWDVRNSHGATPADGSSSEMVGLYTGNTSSIFNVQFMACNLLLVTGTAQEKPEP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggggacgcacggaacagatccagcacactgtagctcaatacttgaagcggagg
cagtatgttgacactgaaagttccctaaagggagtgaaactctctcagtctgcagaggag
atggctgccaacatcacagtgcagactgagtcaggatgtccaaacattgtctcagctgcc
ccttgccaggctgaccctcaacaatacgagacacagttctccagactacggaattttctc
tcagaagcggaagtgccctggggccaggaggtaagctgcatcctgttccccctctttgtc
tacctccacctgggcatggtgcggtgcagcctgaagggggcggtggacggcttctacagc
cgcttccacggtctgttcctgggggaggccgagcagcggtccaccgtggagcagctccgc
cacgtcctcacccagcaggacgtcgcgaccaaccccaagctgctggccttcctcgaccac
aagtacgtggtgcacctgacggagccggcctacagttacctgctgcgctacctgcagagc
gaggacaacagcgccctctgcagggccctcggcacccacatccaggtcgaggtcacctct
tcgccgcgcaccgactaccagctctacgggacggcgagcgccggggcggcctcggcggct
gccgccgacggccccgaggggggaaaggcagccggcgtggaggtcccggcgggcgttcct
caaagcgaggcggccctggaggcgctgcaggactccatcaggagggtgcgcgagggcccg
ccgtcgctcaccaccatgtgcttctacgccttccagcacacggagcggctgctgaacacg
gcggaggtgtcggccgacagcaggcttctggccgccggcttcgacagctcggccgtcaag
ctgtggagcctcagggccaggaagctcaaggcccggtcgcaccgggccgacgtgtcgcgc
atccgcctgtcctgcgacgtgctggaggaggctgaggaggaggacggctcgggcagcgag
atcaagaccctacgcggccacagcggtccggtgttccgcacggccttcctgacagacagc
tcgggcctgctctcctgctccgaggacacgaccgtccgctactgggacctgtgcagcttc
accaatacggccctctaccagggccacgcctacccggtctgggacgtggatgtcagcccc
tgcagcctctacttcgccagcggctcccacgaccgcacggcgcgcctctggaccttctcc
aggacgtaccccctgaggatctacgccggccacctggcggatgtggactgcgtcaagttt
caccccaactcgaactacctagccacgggctccaccgacaagacggtgcgcctctggagc
acccagcagggggcgtcggtgcgcctgttcacgggccaccggggcccggtgttgtccgtg
gcctttgcgcccaacgggaagtacctggcatcggcaggcgaggaccagcgggttaaactg
tgggacctggcgtcgggcgccctggtcaaggacctgaggggtcacacggacagcatcacc
agcctgtcgttcagcccggacagcagcctcgtggcttcctcctccatggacaactccgtc
agggtgtgggatgtccgcaactcccacggggcgaccccggcagatggatcgtccagcgag
atggtcgggctctacacggggaacaccagcagcatattcaacgtccagttcatggcctgc
aacttgctcctggtgacaggcacagcacaggagaaaccggaaccgtag
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integrated database retrieval system
