KEGG   Esox lucius (northern pike): 105021502
Entry
105021502         CDS       T04894                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
els  Esox lucius (northern pike)
Pathway
els03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    105021502 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:els03021]
    105021502 (taf5l)
   03036 Chromosome and associated proteins [BR:els03036]
    105021502 (taf5l)
Transcription machinery [BR:els03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     105021502 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     105021502 (taf5l)
Chromosome and associated proteins [BR:els03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     105021502 (taf5l)
    STAGA complex
     105021502 (taf5l)
    TFTC complex
     105021502 (taf5l)
    SAGA complex
     105021502 (taf5l)
    SLIK complex
     105021502 (taf5l)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd TFIID_NTD2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SCAP PAC11 Beta-prop_Aladin WDR90_beta-prop_4th DSE1_N Beta-prop_RIG_2nd ANAPC4_WD40 CFAP251_N Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_Vps41 ASA1 Tricorn_2nd Beta-prop_WDR19_1st PEP5_VPS11_N WD40_like PROPPIN PD40 WD_LRWD1 BCAS3_WD40 Beta-prop_DCAF12 TRIP13_N Beta-prop_ELP1_1st Cytochrom_D1
Other DBs
NCBI-GeneID: 105021502
NCBI-ProteinID: XP_010887535
UniProt: A0A3P8Y1I9
LinkDB
Position
LG09:18506368..18510682
AA seq 595 aa
MKRGRTEQIQHTVAQYLKRRQYVDTESSLKGVKLSQSAEEMAANITVQTESGCPNIVSAA
PCQADPQQYETQFSRLRNFLSEAEVPWGQEVSCILFPLFVYLHLGMVRCSLKGAVDGFYS
RFHGLFLGEAEQRSTVEQLRHVLTQQDVATNPKLLAFLDHKYVVHLTEPAYSYLLRYLQS
EDNSALCRALGTHIQVEVTSSPRTDYQLYGTASAGAASAAAADGPEGGKAAGVEVPAGVP
QSEAALEALQDSIRRVREGPPSLTTMCFYAFQHTERLLNTAEVSADSRLLAAGFDSSAVK
LWSLRARKLKARSHRADVSRIRLSCDVLEEAEEEDGSGSEIKTLRGHSGPVFRTAFLTDS
SGLLSCSEDTTVRYWDLCSFTNTALYQGHAYPVWDVDVSPCSLYFASGSHDRTARLWTFS
RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRGPVLSV
AFAPNGKYLASAGEDQRVKLWDLASGALVKDLRGHTDSITSLSFSPDSSLVASSSMDNSV
RVWDVRNSHGATPADGSSSEMVGLYTGNTSSIFNVQFMACNLLLVTGTAQEKPEP
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgaagcggggacgcacggaacagatccagcacactgtagctcaatacttgaagcggagg
cagtatgttgacactgaaagttccctaaagggagtgaaactctctcagtctgcagaggag
atggctgccaacatcacagtgcagactgagtcaggatgtccaaacattgtctcagctgcc
ccttgccaggctgaccctcaacaatacgagacacagttctccagactacggaattttctc
tcagaagcggaagtgccctggggccaggaggtaagctgcatcctgttccccctctttgtc
tacctccacctgggcatggtgcggtgcagcctgaagggggcggtggacggcttctacagc
cgcttccacggtctgttcctgggggaggccgagcagcggtccaccgtggagcagctccgc
cacgtcctcacccagcaggacgtcgcgaccaaccccaagctgctggccttcctcgaccac
aagtacgtggtgcacctgacggagccggcctacagttacctgctgcgctacctgcagagc
gaggacaacagcgccctctgcagggccctcggcacccacatccaggtcgaggtcacctct
tcgccgcgcaccgactaccagctctacgggacggcgagcgccggggcggcctcggcggct
gccgccgacggccccgaggggggaaaggcagccggcgtggaggtcccggcgggcgttcct
caaagcgaggcggccctggaggcgctgcaggactccatcaggagggtgcgcgagggcccg
ccgtcgctcaccaccatgtgcttctacgccttccagcacacggagcggctgctgaacacg
gcggaggtgtcggccgacagcaggcttctggccgccggcttcgacagctcggccgtcaag
ctgtggagcctcagggccaggaagctcaaggcccggtcgcaccgggccgacgtgtcgcgc
atccgcctgtcctgcgacgtgctggaggaggctgaggaggaggacggctcgggcagcgag
atcaagaccctacgcggccacagcggtccggtgttccgcacggccttcctgacagacagc
tcgggcctgctctcctgctccgaggacacgaccgtccgctactgggacctgtgcagcttc
accaatacggccctctaccagggccacgcctacccggtctgggacgtggatgtcagcccc
tgcagcctctacttcgccagcggctcccacgaccgcacggcgcgcctctggaccttctcc
aggacgtaccccctgaggatctacgccggccacctggcggatgtggactgcgtcaagttt
caccccaactcgaactacctagccacgggctccaccgacaagacggtgcgcctctggagc
acccagcagggggcgtcggtgcgcctgttcacgggccaccggggcccggtgttgtccgtg
gcctttgcgcccaacgggaagtacctggcatcggcaggcgaggaccagcgggttaaactg
tgggacctggcgtcgggcgccctggtcaaggacctgaggggtcacacggacagcatcacc
agcctgtcgttcagcccggacagcagcctcgtggcttcctcctccatggacaactccgtc
agggtgtgggatgtccgcaactcccacggggcgaccccggcagatggatcgtccagcgag
atggtcgggctctacacggggaacaccagcagcatattcaacgtccagttcatggcctgc
aacttgctcctggtgacaggcacagcacaggagaaaccggaaccgtag

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