Esox lucius (northern pike): 105021573
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Entry
105021573 CDS
T04894
Symbol
helz
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105021573 (helz)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
105021573 (helz)
3'-5' decay
Other 3'-5' decay factors
105021573 (helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_19
AAA_30
UvrD-helicase
ResIII
PAM2
zf_CCCH_4
AAA_22
AAA_16
PhoH
Mov-10_helical
zf-CCCH_4
AAA_7
AAA_5
Motif
Other DBs
NCBI-GeneID:
105021573
NCBI-ProteinID:
XP_012990834
LinkDB
All DBs
Position
LG09:complement(20342656..20401140)
Genome browser
AA seq
1974 aa
AA seq
DB search
MADRRAEKSCEEASRSLARREYEAAVSHCTDALLVLGPPAPPSPGPTASKPPNDTVTSLR
SRALLFRIAALLQLKNYDQADEDCKHVLVKELAKGDGSFQASLRLMLLDGSLQEVAGLLS
KSLFGEPLNGINTKDLTRLKMVLSEIEAIRSEMSTEYTDDNEEAVRDGWQFRPPPRGVTS
SEEYTLCKRFLEQGLCRYGAQCTSAHSQEELMEWQKRYASRLIRLKQQQESKHFTENYME
ALIEKWMNSLSPEKVLSDYLEGVNVEPSSSLSVTVTTKKSAHSWTFSLYCQPVRKLYRIA
LLYDAHRPHFSITGVSAGDAGAQRLQAAPDGCQEWTAGEEALAADNGMDHCVYTVAVGFS
TEIFGTFRQTIVFDFGSEPVLMQRIMVDAASIEDLEHLMQARQQLLMTAKRWDPSCKTIV
EFSPNETVELDRSLLARYQIPLSADQLFTQSVLDKTLTRDNYQARLHDLLYIEEIAQYKE
VSKFNIKVNLQLVTSFMLTGISGGAKYAQNGQLFARFKLTETLSEDTLAGRLVMTKVNSV
LLLPLARHEWCSQPPGVKERVYEACIEEKTKDYIFLRICKDCCEELGLIPDRELQVELQF
QLNRLPLCEMHYALDRIKDNGILFPDASLTPTIPWSPNRQWDEQLDPRLNAKQKEAILAI
TTPLTIPLPPVLIIGPYGTGKTFTLAQAVKHILRQDDSRVLICTHSNSAADLYIKDYLHP
YVEAGNAHARPLRVYFRNRWVKTVHPVVQQYCLISNTQYTFQMPEREDILRHRVVVVTLS
TSQYLCQLDLEPGLFSHILLDEAAQAMECETIMPFALASKSTRIVLAGDHMQLSPFVYSE
FARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYDGKLMASGKQPS
HKDFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEEMRKKWPVAWGKLDEGSIGVV
SPYADQVFRIRAELRKKRMHEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAIKRKE
QLVEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWEKFISICHE
NSSLHGITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRPQPAQHTHQHQHPHPQGHAA
SKQPGPQQQQQQSPPKGKAQHANHTEHFPPEGFVPPSPAVLMGNPIRAFTPPLGATPGGI
GKSPSPVQRIDPHTGASILYVPAVYGGNMVMSMPLPSVPIQLPWPGYQNRFAMDPRIMSH
QAAMAYNLNLLQAQNRGSPIPYGGVTHPSPLGVGQQTSPDKELQAESIRNGKMDGCPKSE
QSRLQTPERKLSEKDKSGELDPGCGRSLDSQTDVPGFSNAMLHRKDNSGQRPLNYHLAPP
NQGFAPHPGGRAFPPQYPGVSRLPFRVPSQHPGGGPAMGQPNQQHSAQLSPAYASGGHNP
SFFGGPVASHRGVPDAEEECPDDMGGSMRSQIGHQGGHHPALSQPNRVNSFGEENQEGLG
DGMDPLALEALSQQARLGQWGEPGPFIQGGVAFPLPHQLAQLAQPGLARLPPQMLARTNW
RMSAGLEDESGGPQFTRFPGLLREMPPQEHPDPRDMAEMQPPPQSRLLQYRQVQSRSPGD
PSSPSAGSANHAGPFPPGPYPGRDPTSQELELLNNPALQQHPGNPLYNPNAYPHQSGHST
SPPPQVKYLLQEAQWPHGAASVSQNHMPGQGFPYGLHVMAHPSRQEQVHLMQLHHHQQQQ
QQQQQQQQQQAQGPGQDPYHTLSPRTAAATALHNVEEYEPRGPGRPLYQRRISSSYPEEG
SPANAASMAQPQPCQVDPQEHQHPHAHQHPHAPYGYPFQNIPCNGASTLVQHRDLLASSK
ALRHAAEEQMKAEAASAVSQPPAHTLQQPGQFPPLMPNAKQQQHQAPPEPGQGPGGPPNL
GKTPTMSYASALRAPPKPRARPEQVKKNSDPLSILQELSIGSSNGSNGYYSYFK
NT seq
5925 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggagagcggagaagtcatgtgaagaagccagcagatcgttagccaggcgg
gagtacgaggcggcggtgagccactgcacagacgcgctgctggtccttggccccccggcc
ccgccgagccccggacccaccgcatccaaaccccccaacgacacggttacatccctccgc
agccgagccctgctcttcaggattgctgcccttctacagctgaaaaactatgatcaagca
gatgaagactgcaaacatgtcttggtcaaggagctggccaagggagatgggtcgtttcag
gccagcctgcgcctcatgctgctggacggcagccttcaggaagtggcaggcctcctctcc
aagtccctgtttggggagcctctgaacgggatcaacacgaaggacttgactagattaaaa
atggttctctcagaaattgaagctattagaagcgagatgtcgacggagtacacggacgac
aatgaggaagcagtgagggacggctggcagtttcgcccccctcccagaggagttaccagc
agtgaggagtacacgctatgtaaaaggttcctggagcagggcctgtgccgctacggtgcc
cagtgcacgtcggcccactcccaggaggagctgatggagtggcagaagcgctacgcctcg
cgactcatccgcctcaagcagcagcaggagagcaaacacttcacggagaactacatggag
gcgctcatcgagaagtggatgaactctctgtcgcctgagaaagtgctgagcgactacttg
gagggtgtcaacgtggagcccagctccagcctgtccgtgaccgtcaccaccaagaagtca
gcccactcctggaccttctccctgtactgccagccggtgaggaagctgtaccgcattgcc
ctgctctatgacgctcaccggccccacttctccatcacgggcgtgtcggcgggcgacgcc
ggggcccagcggctgcaggcggcccccgacggctgccaggagtggacggcgggcgaggag
gcgctggctgccgacaacggcatggaccactgcgtctacacggtggcggtgggcttcagc
accgagatcttcggcaccttccgccagaccatcgtcttcgactttggctcggagcccgtg
ctcatgcagcggatcatggtggacgccgcctcgattgaagacctggagcacctgatgcaa
gccaggcagcagttactgatgacggccaagcgctgggacccgtcctgcaagaccattgtg
gagttcagccccaacgagacggtcgagctggaccgcagcctgctggcccgctaccagatc
cccctgtcggccgaccaactgttcacccagtcagtgctggacaagaccctgacccgggac
aattatcaggcccgcctgcacgacctgctgtacatcgaggagatcgcccagtacaaggaa
gtcagcaaattcaacatcaaagtcaacctccagctggtcacaagcttcatgctgactggc
atctcgggtggcgccaaatatgcccagaacggccagctttttgcccgcttcaagttgact
gagacgctatcggaggatacgctagcgggccgcctggtcatgaccaaggtcaactctgtc
ctgctgctgcccctggctcgtcatgagtggtgcagccagccgcccggggtcaaggagcgg
gtgtatgaggcctgcatcgaggagaagaccaaggattacatcttcctgcggatttgcaag
gattgttgcgaggagctggggttgatacctgatagggaactgcaggtggagcttcagttc
cagttgaaccgcctgcccctgtgtgagatgcactacgcactggaccgcatcaaagacaac
ggcatcctgttccccgacgccagccttactcccacaatcccctggagtcccaacagacag
tgggatgagcagctggacccgcggctcaacgccaagcagaaggaggccatcctggccatc
accacgcccctcaccatccccctgccgcccgtgctcatcatcgggccctacggcacgggc
aagaccttcaccctggcacaggccgtcaagcacatcctccggcaggacgacagcagggtc
ctcatttgcacccattccaacagtgcggctgacctctacattaaggactaccttcacccg
tacgtagaagcaggcaacgcacatgccagacctctcagggtatacttcaggaaccgctgg
gtgaagaccgtccacccggtggtgcagcagtattgtttgatctccaacacccagtacact
ttccagatgcccgagagggaggacattctcaggcaccgcgttgttgtggtcactctcagc
acctcccagtacctctgccagctggacctggagcccggtctattttctcacatcctgttg
gacgaggcggcccaggccatggagtgtgagaccatcatgcctttcgcactggccagcaaa
agcacccgcatcgtgctggctggggaccacatgcagctcagtccgttcgtgtacagcgag
tttgcccgggagcggaacctgcacgtgtcgctgttggaccggctgtacgaacactacccc
gccgagttcccctgccgcatcctgctctgcgagaactaccgctcccacgaggcaatcatc
aactacacatcagaactgttctatgacgggaagctgatggccagtgggaagcagccctcg
cacaaggacttctacccactgaccttcttcactgcgcgcggggaagacgtccaggagaag
aacagcacggcctactacaacaacgcagaggtgtttgagatcgtggagcgggtggaggag
atgcgtaagaagtggccagtggcgtggggcaagctggacgaaggaagcatcggcgtggtg
tcgccctatgccgaccaggtttttcgaatccgcgccgagctccgcaaaaagaggatgcac
gaagtcagcgtggaaagggtgctcaacgtccaaggtaaacagttccgggtgctcttcttg
agcaccgtgaggacacggcacacctgcaagcacaagcagacggccatcaagcggaaggag
cagctagtcgaggattcgacggaggacctggactacggcttcctttccaactacaagctg
ctcaacacggccatcacccgcgcccagtccctggtggccgtggtgggtgaccccatagcc
ctgtgctcggtgggccgttgcagaaagttctgggagaagttcatctccatctgccacgag
aactccagcctccacggcatcaccttcgagcagatcaaggcccagctggaggccctagag
ctcaagaagacctacgtgctcaacccactggcgcccgagttcatcccccgcgccctgcgg
ccccagccggcccagcacacccaccagcaccaacacccccacccccagggacacgcggcc
agcaaacagcccgggccccagcagcagcagcagcagtccccccccaaggggaaagcacaa
catgcaaaccacacagagcacttcccacctgaaggatttgttccaccaagcccggcggta
ttgatgggcaaccccattcgggctttcacaccgcccctgggtgccacccccggtggcatc
ggcaagtcccccagtccagtgcagaggatagacccccacaccggtgccagcatcctctat
gtgcccgctgtctatgggggcaacatggtcatgtccatgcctctgccgtctgttccaatc
cagttgccgtggcctggctaccagaaccgctttgccatggacccgcgtatcatgagccac
caggcggccatggcttacaacctcaacctgctgcaggcccagaaccggggctcgcccatc
ccctacggcggtgtcacgcacccctcccctctcggcgtgggccagcagacaagccctgac
aaagagctccaagctgaatccatccgaaacggtaaaatggacgggtgtccaaagtcagaa
cagagccggctccagactccagagaggaagttgtcagaaaaggacaaatcgggagagctg
gacccgggctgcgggcgttctctggactctcagacggatgtcccgggcttctccaacgcc
atgctccaccgcaaggacaactcaggccaaagacccctgaactaccacctagcacccccc
aaccagggctttgccccccaccccggcggccgagccttccccccgcagtaccccggagtg
tccaggctcccctttagggtgccgtcgcagcaccctggcgggggcccggccatgggccag
ccgaaccaacagcactcggctcagctctccccggcctatgccagcggcggccacaacccg
tccttcttcggagggccggtggcctcccacaggggcgtaccggatgcggaggaggagtgt
ccagatgacatggggggctccatgaggtcccagattggtcaccagggggggcaccacccg
gccttgtcgcaacccaaccgggtcaacagcttcggggaggagaaccaggaaggcctgggg
gatggaatggacccccttgcgttggaagccctgagtcagcaggcgcgtctgggccagtgg
ggagaacctgggcccttcatccagggcggtgtggccttccccctgccccatcagctagcc
caactagcccagcccggcttggcccgccttcccccccagatgctggcccggaccaactgg
cggatgagcgctggcctggaggacgaatcaggcgggccgcaattcaccaggttccccggc
ttgctgcgagagatgccgccccaagagcaccccgatcccagggacatggctgagatgcag
ccccctccccagtcccgtctgcttcagtaccgccaggtccagtcgcgctccccgggcgac
ccatcgtcgccctcagccggcagcgccaaccacgcgggacccttcccccccgggccctac
ccgggccgtgaccccaccagccaagagctggagctactcaacaacccggctctccagcag
caccctgggaacccgctctacaaccccaacgcctacccccaccagtctggtcactccacc
tccccgccgccgcaggtcaagtacctgctccaggaggcccagtggccccacggtgctgcc
agcgtgtcccagaaccacatgccgggccagggcttcccgtatgggctgcacgtcatggct
caccccagccggcaggagcaggtgcacctgatgcagctccaccaccaccagcaacagcag
caacaacaacagcagcaacagcagcagcaggctcaaggcccaggacaggatccctaccac
accctctcccctagaacagcagctgccaccgcccttcacaatgtagaagagtatgaacca
cggggtcccgggcggcccctctaccagcggcgcatctcctccagctacccagaggaggga
tcccccgccaacgccgcttctatggcccagccacagccctgccaggtggacccccaagag
caccaacacccccacgcccaccaacacccccacgccccctatggctacccgttccagaac
attccatgcaacggagccagcacactcgttcaacaccgggacctcctagcttcctccaag
gccctgcggcacgcagctgaggagcagatgaaggcagaagccgcgtcggcggtgtcccag
ccccccgcccacaccctccagcaacctggacagtttcccccgctcatgcccaacgccaag
cagcagcaacatcaggcccctccggaacccggccaggggcccgggggccccccaaatctt
ggaaaaacccccaccatgtcctacgccagcgcccttcgtgccccgcccaagccccgagca
cggcccgaacaggtcaaaaagaacagcgacccgctgtccattctccaggagctcagcata
ggaagttcaaacggtagcaacggatactattcctattttaaatga
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