Esox lucius (northern pike): 105021634
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Entry
105021634 CDS
T04894
Symbol
ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
els
Esox lucius (northern pike)
Pathway
els03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105021634 (ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105021634 (ddx5)
03009 Ribosome biogenesis [BR:
els03009
]
105021634 (ddx5)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105021634 (ddx5)
Spliceosome [BR:
els03041
]
Complex A
U1 snRNP components
U1 related factors
105021634 (ddx5)
Complex B
105021634 (ddx5)
Ribosome biogenesis [BR:
els03009
]
Eukaryotic type
Pre-60S particles
Helicases
105021634 (ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105021634
NCBI-ProteinID:
XP_010887724
LinkDB
All DBs
Position
LG09:16617778..16623698
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AA seq
632 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGAPRFGGGSRGGPPQGKFGNPGERLRKKHWNMDELPKFEKNFYQ
EHPDVTRRLPQEVENYRRSKEVTVKGRDCPKPMMKFNEASFPNYVMDVIVKQGWAEPTPI
QAQGWPLALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLAPTRELA
QQVQQVAAEYGRASRLKSVCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR
RCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQI
NVGALQLSANHNILQIVDVCNDGEKDDKLLRLLEEIMSEKENKTIIFTETKRRCDELTRR
MRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLVAVLREANQAINPKLLQMADSRGG
RGGGGRGGYRDDRRDRYSGGRSYGGGSGGGGGSYRDKDSDRGFGGGPKTAFGTKTQNGGG
YGGSSYDKSASSGNSYGNSYSSNGQSNFSAGNQVGAFGGQNYQAQPQFGAAQAPAQNGMS
HPPFPFNPQALQPQQPPPPPMVPYPMPPPFPQ
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcctggattttcagacagagatcgtggcagagaccggggttatggaggtgcacctcgt
tttggtggtggcagtagaggcggacccccccaggggaaatttggcaacccaggggagagg
ctgcgcaaaaaacactggaacatggatgagctcccaaagtttgagaagaatttctaccag
gagcacccagatgtgacccgcagactacctcaagaagttgagaactacagaaggagtaaa
gaagtcacagtgaaaggcagagactgccctaagcccatgatgaaatttaatgaggccagt
tttccaaattatgtaatggatgtcattgtgaaacaaggctgggctgagccaactcctatt
caagctcagggctggcctctggctcttagtgggaaagacatggtgggcatcgcccagacc
ggctctggcaaaaccctagcttacctgctcccagccatcgtgcacatacaacaccagccc
tttctggagcatggagacgggcctatctgcctggtcctggccccgacccgcgagctggcc
caacaggtacagcaagtggctgccgagtacggacgggcctcccgtctcaagtctgtttgc
gtctacggcggcgcccccaaaggaccacagattcgggacctagagagaggtgttgagatc
tgtattgccacacccgggcgcctcattgacttcctggaagctggaaagaccaacctacgc
aggtgcacatacctcgtgctggatgaggctgatcgtatgctggacatgggctttgagccc
caaatccgcaagattgtggagcagatccgaccggatcgtcagacgctgatgtggagtgcc
acctggcccaaagaagtgcgccagttggctgaggacttcctcaaagagtacgtccagata
aacgtgggtgccctacagctcagcgccaaccacaacatcctgcagatagtggacgtatgc
aacgacggcgagaaggacgacaaactcctaaggctgctcgaagaaatcatgagcgaaaag
gagaataagaccataatctttacagagaccaagagacgctgcgatgagctcacaaggagg
atgcgacgggatggctggccagcaatgggtatccacggagacaagagccagcaggagaga
gactgggttctcaatgagttcaaatacggcaaggcccccattctcatcgccaccgacgtg
gcctcccgcggtctagatgtggaagatgtgaaatttgtcatcaattatgactatcctaac
tcctctgaggactatatacaccgcattggacgcacggcccgcagtcaaaaaacgggcact
gcctacaccttcttcacccccaacaacatgaaacaggccagcgacctcgtagctgtgctc
cgcgaagccaaccaggcgatcaaccccaagctacttcagatggcggattcccgaggaggt
cgtggaggggggggaagaggtggctatagggatgaccggcgggataggtattctgggggg
aggagttatggtggcggtagcggcggaggcgggggtagttacagggataaagatagcgac
aggggcttcggtgggggaccaaagactgcttttggtaccaagacccaaaacggcgggggc
tacgggggtagcagctacgacaagagtgccagctctggcaacagttacggcaacagttac
agcagcaatggacagagtaacttcagcgccggcaaccaggtgggtgcgttcggtggccag
aactaccaggcccagccgcagttcggagccgcacaggcgcctgcccagaatggcatgagt
cacccaccgttcccatttaacccgcaggcactgcaaccccaacaacccccacccccaccc
atggtcccctatcccatgcctccacccttcccacagtaa
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