Esox lucius (northern pike): 105021937
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Entry
105021937 CDS
T04894
Symbol
ddx3x
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
els
Esox lucius (northern pike)
Pathway
els04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
105021937 (ddx3x)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105021937 (ddx3x)
03041 Spliceosome [BR:
els03041
]
105021937 (ddx3x)
03036 Chromosome and associated proteins [BR:
els03036
]
105021937 (ddx3x)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105021937 (ddx3x)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105021937 (ddx3x)
mRNA cycle factors
Common to processing body (P body) and stress granule
105021937 (ddx3x)
Spliceosome [BR:
els03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105021937 (ddx3x)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105021937 (ddx3x)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
APC_u13
Motif
Other DBs
NCBI-GeneID:
105021937
NCBI-ProteinID:
XP_010888274
LinkDB
All DBs
Position
LG20:complement(11431383..11449638)
Genome browser
AA seq
798 aa
AA seq
DB search
MSHVVVDNPHGLDQQLAGLDLNSDGQGGGTGRRYIPPHLRNKEVSKNENAYSSGRQYGYS
VPPPVNFFFPKQYHQTWQPEGHQRHRNSYPPGWDDGNPRLASQEPVSHHFHGGSCSDSWD
SSGGWESGRSNGFANGYHDNRNGGFGGRSGPPRNDRGGRGSYRSNTMGGPPFNQPVHAAG
FGGQDSGGWGGAPRQDAAYNSFGGRGKSSFYNDRGSSGGRGSYQRGGYGGGGNSRWQEDS
REDEDWSKPSPPNERLEAELFSSGNTGINFEKYDDIPVEATGTNCPPHIDSFHDLDMGEI
IMSNIALTHYSRPTPVQKYAIPVIKSKRDLMACAQTGSGKTAAFLVPVLSQIYTQGPGDA
SAAAKNGQDSGKYGRRKQYPLSLVLAPTRELALQIYEESRKFAYRSRVRPCVVYGGADIG
QQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQ
DTMPPKGIRQTMMFSATFPKEIQMLARDFLEDYIFLAVGRVGSTSENITQKVVWVEEGDK
RSFLLDLLNATVIPSDAPDVQEAAVTPGKESLTLVFVETKKGADALEDFLYREGYACTSI
HGDRSQRDREEALNHFRSGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGR
TGRVGNLGLATSFFNDKNSNITKDLLDILVEAKQEVPSWLESLGYENPHKGNTGRGRSKR
FSSGGFGARDYRQTPGGGGFGSGSGRGGARTGGHGGGGGSRGGFGGGGFGGGNFYGGNDA
GYGGNYSHSSSGTDWWGN
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtcgtcgataatccacacggtctagatcagcagctggctggcctagac
ttgaactctgacggacagggaggaggtaccggcaggcgttacattccacctcacttgagg
aacaaagaggtgtccaaaaacgagaatgcttattcctctggtagacagtacggttattct
gtaccaccaccagtaaacttcttttttcctaagcagtaccatcagacatggcagcctgaa
ggccaccaaagacacagaaatagctatccacctggatgggatgacggtaacccaagactg
gcctctcaggagcctgtctctcaccacttccacggtgggagctgctctgacagctgggac
tcttcgggcggatgggaaagcggacgcagcaacggctttgccaacggttaccatgacaac
cgcaatgggggcttcgggggacgcagtgggcctccccgaaatgacagaggtgggcgtggc
agctaccgcagtaacaccatgggtggccccccgtttaatcagccagtgcacgccgcaggg
tttggtgggcaggacagtggaggctggggcggggctcccaggcaagacgcagcctataac
agctttggagggaggggaaagtcatccttctacaacgaccgtgggtcatcgggtggcaga
ggaagttatcaacgtggaggttatggcggtggaggcaacagccgctggcaggaagactcc
agggaggacgaggactggtccaaacccagcccccccaatgaacgcctggaagcggagctg
ttctcaagcggcaacaccggtataaactttgagaaatacgatgacattcctgtggaggcc
acaggaaccaactgtccaccacacatcgacagtttccacgatctggatatgggtgagatc
attatgagcaacattgccctgacccactactcacgccccaccccggtccagaagtacgcc
atccctgtcatcaagtccaagagggacctcatggcctgcgctcagactggctcgggtaag
actgcagccttcctggtgccggtgctgagtcagatctatacacagggaccgggtgatgcc
tcggcagctgccaaaaacggacaggacagcggtaaatatggtcgtcgtaagcagtacccc
ctctccctggtcctggcccccaccagagaactggccctgcagatctatgaggagtccagg
aagtttgcgtatcgctcacgcgtccgtccctgcgtggtgtatggtggggcagatatcggc
caacagatcagagacctggaacgaggctgccacctgctggtggccacacctgggcgcctg
gtggacatgatggaaaggggcaagatcggcctcgactactgcaactacctggtgctggac
gaagctgacaggatgttggacatgggctttgagccccagatccgacgcatcgtggagcag
gatacaatgccacccaaaggcatccgccagactatgatgtttagtgccacctttcccaag
gagattcagatgcttgcccgtgacttcctggaggactacatcttccttgccgtcggccgt
gtcggctccacctctgaaaacatcacccaaaaagtggtttgggtggaggagggggacaaa
aggtccttcctgctggacctgctcaatgcaacagtcattcccagtgatgctcctgatgtt
caggaggctgcagtgacacccggtaaagagtctctaaccctggtgtttgttgagacgaag
aagggagcagacgccctggaggactttctgtaccgcgaaggctatgcctgcaccagtatc
cacggtgaccgctcacagagagaccgagaggaggcattaaatcacttccgctctgggcgc
tgcccgatcctggtggccactgcggtggctgcccgtggtttggacatctccaacgtcaag
catgtaatcaactttgacctacccagcgacatcgaggaatacgtccaccgtattggtcgt
acaggccgagtgggaaacctgggtctggccacatcgttcttcaacgacaaaaacagcaac
atcaccaaagacctgctggacatcctggtggaggccaagcaggaggttccttcctggttg
gaaagcctgggctatgagaacccccacaagggcaacacgggacgtggacgctccaagagg
ttctcctctggtggattcggtgccagggattatcgtcagacgcccggcggcggcggcttc
gggagtggcagcgggcgcggtggggcacgcactggaggccacggcggcggaggagggagc
agaggcggttttggtggaggtggctttggaggcggaaacttctatggcggcaatgacgcc
ggctacggtggcaactacagccactccagtagtggaacagactggtggggcaactag
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