Esox lucius (northern pike): 105022264
Help
Entry
105022264 CDS
T04894
Symbol
sox6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105022264 (sox6)
Transcription factors [BR:
els03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105022264 (sox6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
MoCoBD_1
Motif
Other DBs
NCBI-GeneID:
105022264
NCBI-ProteinID:
XP_028981061
LinkDB
All DBs
Position
LG02:complement(18277240..18450578)
Genome browser
AA seq
879 aa
AA seq
DB search
MRLLIETLTHLGTLYLDNQTSTARTKCSSRTVLGTNGYLLVDIRGTGGFVKKKKIRTGPG
HKDIDSLTHMWCYRIMSSKQATSPFASVADGEEAMSQDHLSWEKEESAEAHGTPQLPLHS
LLHSKGSMGQLQPLSSVPPESDWDGMVSAQQRMESDSNKVCSLYSFRNNSTSPHKPEEGA
RERGDLLSGSAFGTPERRKGSLADVVDTLKQKKLEEMTKTEQDESACMEKLLSKDWKEKM
ERLNASELLGAVKGTPESLAEKEHQLSTMISQLINLREQLLAAHDEQKKLAASQMEKQRQ
QMELARQQQEQYYEEGCSMIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQ
RTLAAAAAAQQGFLFPPGISYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASM
QVSPGAKMPLPQPPNNSGPISPSGLKNDKRSSSPITQVKEEGTQPLNLSSRPKTAELVKS
PTSPTHSMFPGSKSSPNSLSKSGIPSPLGSMGRGSSLDILSSLNSTALFGDQDAVMKAIQ
EARKMREQIQREQLQHHQQDMEAKLSALTGLNNCSRADKSWFTEYIERAHFESLGHHHLS
KLGEDGKIGHRVIDLTRPEDLDGWKALNGSGTGADKPQQYYCWPTGGTSTAEARVYREAR
GRNSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNQEKQPFYE
EQARLSKIHLEKYPNYKYKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFTVGQQPQ
IPISTSAGVVYPGAITMATTTPSPHMTSECSSASASPEPAIPVIQSTYNMKIEPCAMVTN
DPLINGEVDEMDMYEDFDEEPKSDYSSETETLEPIVGAN
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgcgactactcatcgaaacgctaacccatttagggacattatacctggacaaccagact
tccacggcaagaacaaagtgcagctctcggactgttttagggactaacggctatctgctc
gtagacatcagaggaactggtggttttgtgaaaaagaagaaaatccgaactggtcccggg
cataaagatatcgactccttgacgcatatgtggtgctacagaataatgtcttccaagcaa
gccacgtctccgtttgcctccgtcgccgatggggaggaagctatgagtcaagatcacctg
tcctgggagaaggaagagagtgccgaggcccacgggacaccccagctgccgctgcacagc
ctgctccacagcaaaggctccatgggccaactgcagccccttagcagcgtcccaccggag
agtgactgggacggcatggtgtcagcccagcagcgcatggaatctgacagcaataaagtg
tgttccctgtattccttccggaataactcaacctccccacacaagcctgaggagggggcc
cgggagcgtggcgacctgctgagcggatctgcatttggaacgccggagcgccgcaaagga
agcctggctgacgtggtggacacactgaagcagaagaagctggaggagatgacaaagaca
gagcaagatgaatctgcttgcatggaaaaacttctgtcaaaagattggaaagagaagatg
gaaaggctcaacgctagtgagcttctgggagcagtaaaaggtactccagagagcctggca
gagaaggaacaccagctcagtaccatgatctcccagctgatcaacctgagagagcagctc
ctggccgcccatgatgaacagaagaaactggctgcctcacagatggagaaacagaggcaa
caaatggagcttgcccgccagcagcaggaacagtattatgaagaagggtgttccatgatt
gcccgacaacagcagcagcttttgcagcagcagcacaaaatcaatctcctccagcagcag
attcagcaggtccagggtcacatgcctccgctcatgatccccatttttccacacgaccaa
cgcactctagcagcagcggccgcagcccagcaaggctttctcttcccaccaggaatctct
tacaagccaggtgataactacccggtgcagttcattccatccacaatggcagctgcggca
gcgtcaggactcagccccctccagcttcagcaactgtacgccgcccagcttgccagcatg
caggtctctcctggagccaagatgccacttccccagcctccgaacaacagtgggcccatc
tccccctctggcctgaagaacgacaagaggtcttccagccccatcactcaagtcaaggag
gagggaacgcagcctctcaacctatcctcccggcccaagacagcggagctggtcaagtcc
cccacgtcccccacacacagcatgttcccgggcagcaagagcagccccaacagcctgtca
aagagtggcatccccagccccctcggaagcatgggacgtggttcttctctggacatcctg
tccagcctgaactccactgcgctgttcggagaccaggacgcggtgatgaaggccatccag
gaggcgaggaagatgagggagcagatccagcgagagcagctgcaacaccatcagcaggac
atggaggccaagctctccgccctcacaggcctcaacaactgcagtagggccgacaagagc
tggttcactgagtacattgagcgggcacactttgagagccttgggcaccatcaccttagc
aagctgggcgaggatggcaagattggacacagagtcatcgacctcaccaggccagaggat
ctggatgggtggaaagctctgaatggctctggtaccggagcagataaaccacaacagtat
tattgttggcctacaggaggcaccagtacggccgaggcgcgggtctacagggaagcccgg
ggaaggaacagcaacgagccccacatcaagaggcccatgaatgccttcatggtgtgggcc
aaggatgagcgccgcaagatcctccaggccttcccagacatgcacaactccaacatcagc
aagatcctgggctctcgctggaagtccatgaccaaccaggagaagcagcccttctacgag
gagcaggcccggctcagtaagatccacctggagaagtaccccaactacaagtacaagccc
cggcccaagagaacctgcatcatcgacgggaagaagctccgcatcggcgagtacaagcag
atgatgcgctcgcgacggcaggagatgaggcagttcttcactgtgggccaacaaccgcag
atccccatcagcaccagtgccggcgtggtctaccctggggccataaccatggcaacgacc
acaccctcccctcacatgacgtcagaatgctccagtgcctcagcaagcccggagccggcc
attcccgtcatccagagcacctacaacatgaagatagagccctgtgccatggtaaccaat
gaccccctcatcaacggagaggtagatgagatggacatgtacgaggacttcgatgaggaa
cccaaatcggactacagcagtgagaccgagacactggagcccatcgtcggcgccaactaa
DBGET
integrated database retrieval system
