Esox lucius (northern pike): 105022304
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Entry
105022304 CDS
T04894
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1
KO
K11981
E3 ubiquitin-protein ligase NRDP1 [EC:
2.3.2.27
]
Organism
els
Esox lucius (northern pike)
Pathway
els04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105022304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105022304
04121 Ubiquitin system [BR:
els04121
]
105022304
03029 Mitochondrial biogenesis [BR:
els03029
]
105022304
Enzymes [BR:
els01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105022304
Membrane trafficking [BR:
els04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
105022304
Autophagy
Mitophagy
PINK1-Parkin associated proteins
105022304
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105022304
Mitochondrial biogenesis [BR:
els03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
105022304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_interact
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-rbx1
zf-Nse
zf-RING_6
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
U-box
zf-RING_5
zf-ANAPC11
Sina_ZnF
zf-RING_10
zf-RING_16
Sos7
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
105022304
NCBI-ProteinID:
XP_010888866
UniProt:
A0AAY5KA58
LinkDB
All DBs
Position
LG12:11561678..11569111
Genome browser
AA seq
318 aa
AA seq
DB search
MGYDVTRFQGEVDEDLLCPICSMVLEEPVQAPHCEHAFCNACITQWFSQQQNCPVDRTVV
TLAHLRPVPRIMRNMLSKLQIACDNAGFGCTATPRLDQLQSHLKDCEHNPKRPVSCEEGC
GLEMPKDEMCSHNCIKHLRGVVQQQQTKISELEKNAAEHKHQLGEQKRDIQLLKAYIRAI
RSANPNMQNLDESIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLIDSGCPL
SIVNDLIENAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDM
ILEPGLVMIFAHGVEEIL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggggtacgacgtcaccaggttccaaggggaggtggatgaagacctgctgtgtcccatc
tgcagcatggtgctggaggaaccagtgcaggcgccgcactgtgagcatgccttctgcaac
gcctgcatcacccagtggttcagccagcagcagaactgccctgtggaccgcaccgtggtg
acgctggcccacctccgtcctgtgccccggatcatgcgcaacatgctctccaagctccag
atcgcctgtgacaacgccggcttcggctgcacggccacgccgcggctcgatcagctgcag
tctcacctgaaggactgcgagcacaatcccaagaggcctgtcagctgtgaggagggctgc
gggctggaaatgccaaaagatgagatgtgcagccacaattgtatcaagcacttgcgtggt
gtggtccaacagcagcagaccaagatctctgaactggagaagaacgctgcagagcacaaa
caccagctaggagaacaaaaacgggatatccagctgctaaaagcttacatcagagcaata
cgcagcgccaatccgaatatgcagaacctggatgagagcattgagtacaatgagatcctc
gaatgggtcaactccctccagcctgcacgggtgacacgctggggcgggatgatctccacg
ccagacgcagttctccaggcagtcattaagcgttcccttattgacagtggctgtccgcta
tccatcgtcaatgacctgatcgaaaatgcccacgagaggaactggccccagggcctggcc
acgctggagacccggcagatgaaccgacgttactacgagaactacgtggccaagcgtatc
ccggggaaacaggcagtggtggtgatggcctgtgagaaccaacacatgggggaggacatg
atcttagagccaggcctggtcatgatctttgcccatggggtggaggagatcttatag
DBGET
integrated database retrieval system
