Esox lucius (northern pike): 105022614
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Entry
105022614 CDS
T04894
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
els04040
]
105022614 (trpc1)
Ion channels [BR:
els04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105022614 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
Utp12
TALPID3
Motif
Other DBs
NCBI-GeneID:
105022614
NCBI-ProteinID:
XP_010889498
UniProt:
A0A3P8X828
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Position
LG21:13681326..13701424
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AA seq
813 aa
AA seq
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MERLLVSLLLVIVGISLKSRKSKSGQPLSQDMPEKKGTDVSSPDKFLALKDVREVKEETT
LDEKLFLLACEKGDYYMVKKLLEEKHHGELNINCVDVLGRDAVTISIENENLDILKLLLE
HGCQATDALLVAIDSEVVGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVIL
AAHRNNYEILTMLLKQDISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSL
IMLTEEDPILRAFELSADLRELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVI
LNHMANEDTVDKRGLMEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRK
HTCLKMATVLSVAVLWPLLSLCYLVVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYS
LVYNEGKKNTMGPALEMIDYLLILWIIGMVWSDVKRLWYEGLEDFLDESRNQLSFVMNSL
YLSTFALKIVAHSKFKNVDDTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSIL
GPLQISMGQMLQEFGKFLGLFLLVLISFTIGLTQLYGKDQKDPAKSPAKDCEGIFCQQQS
NDAFHTFMGTCYALFWYIFSLAHVALFVTRISYTEELRSFVGALIVGTYNIVVVIVLTKL
LVAMLHKSFRQIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLLTSMSK
WICSHTSTGKVKRQNSLKEWRNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATMEN
LNDLRQDLSKFRNEMRDLLGFRTSKYAMFYPRN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggaacgactgcttgtctccctgcttctggtaatagtgggcatctccttgaagtcaaga
aagtccaaaagtggtcaaccattgtctcaagatatgcccgaaaaaaagggcacggacgtg
tcctctccggataaatttctggccctgaaagacgtgagggaggttaaagaggagactact
ctggacgagaagctcttcctactggcctgtgagaaaggtgactactacatggtgaagaag
cttctggaggagaagcatcatggagaactcaacatcaactgtgtagatgtgctggggaga
gacgctgtcaccatctccattgagaacgaaaacctggatatccttaagctgctgctggaa
catggctgtcaggcaaccgatgctctgttagtggccatcgactcagaggtagtgggagct
gtagatatcctcctcaaccatcggcccaggaggtcctccaagccctccattgctaaactg
atgcagcgcatccagaaccctgagtactccaccaccatggacgttgccccggtgatcctg
gcagcccatcggaacaactatgagatactgaccatgctgctgaagcaggacatctccctg
cccagacctcacgctgtgggctgtgagtgcaccctctgcaacgccaaaaacaagaaggac
agcctacgacactccagatttcgtctggacatctacaggtgcctggccagcccatcgctg
atcatgctaacagaggaggaccctattctcagggcctttgagctgagtgccgacctccgg
gagctgagcctggtggaggtggagttcaggaatgactatgaggaactggctaagcagtgt
aagatgtttgctaaggacctcttggcccaggcacgcaactccagagagcttgaggtgatc
ctcaaccacatggccaatgaggacacggtggacaaaagaggcctaatggaggaacgcatg
aacctcagccgacttaaactggccatcaagtacaatcagaaagagtttgtcgcccagtcc
aactgtcagcagttcctcaacactgtctggttcggtgagacggccagctatcggcgtaaa
cacacctgtctgaagatggccacggtgctgagtgtggctgtgctgtggccgttgctctcc
ctgtgctacctggtggtgccgcgctcccgcgttggtcagattatccacacaccttttgtc
aagttcattatccacagtgcctcatacttcaccttcctcctgctgctcaacctctactct
ctggtgtacaacgagggaaagaagaacaccatgggccctgctctggagatgattgactat
cttctcatcctctggataatagggatggtgtggtcagatgtgaagcgtctatggtacgag
ggcctagaggacttcttggatgagtcgagaaatcagctgagcttcgtcatgaattccctc
tacttgtccaccttcgccctcaagatagtagcccatagcaagtttaaaaatgtggacgac
acagaaaggaagaactgggatgccttccaccccattctcgttgctgagggcctgttcgcc
tttgctaacgttttgagctacttacgactcttcttcatgtacaccaccagctccatactt
ggaccactacagatctccatgggccagatgctgcaggagtttgggaagtttctgggtttg
ttcttgctggtgctcatctccttcaccatcggcctgacgcaactctacgggaaggaccag
aaggacccggcaaagagcccggccaaggactgtgagggcatcttctgtcagcagcagagc
aacgatgccttccacacattcatggggacgtgctatgcactgttctggtacattttctcg
ctggcccatgtggctctcttcgtgacccggatcagctacacggaggagctgaggtcgttt
gtgggagcactcatcgtgggaacatacaacattgtggttgtcattgtacttactaagctg
ctggtcgcaatgctgcacaagagcttcaggcagatcgctaaccacgaggataaggagtgg
aagtttgcccgcgccaaactatggctgagctacttcgacgacaagtgtaccctgccaccc
cccttcaacatcctgccctcccctaagactgtgtgttacctcctgaccagtatgagtaaa
tggatctgctcccacacctccacggggaaggtcaagagacagaacagcctcaaggagtgg
aggaacctgaaacaaaagcgtgacgagaactaccagaagatcatgtgctgtctggttcat
cgctacctgacatccaccaggcagaagatgcagagcacagaccaggccaccatggagaac
ctaaacgacctgagacaggacctatccaagttccgcaatgaaatgagagaccttctaggt
ttcagaacctcaaagtatgccatgttctatcccagaaactag
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