KEGG   Esox lucius (northern pike): 105022624
Entry
105022624         CDS       T04894                                 
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
els  Esox lucius (northern pike)
Pathway
els04137  Mitophagy - animal
els04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    105022624
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    105022624
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:els04121]
    105022624
Enzymes [BR:els01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     105022624
Ubiquitin system [BR:els04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105022624
  Multi subunit type E3
   ERAD complex
    105022624
   LMBR1L-GP78-UBAC2 complex
    105022624
SSDB
Motif
Pfam: zf-RING_2 G2BR zf-C3HC4_2 CUE zf-C3HC4 zf-C3HC4_3 zf-RING_11 zf-rbx1 zf-RING_UBOX zf-RING_16 zf-RING_5 zf-ANAPC11 zf-C3HC4_4 Prok-RING_4 zf_RING_Vps8 RING_XB3-XBAT31
Other DBs
NCBI-GeneID: 105022624
NCBI-ProteinID: XP_010889517
LinkDB
Position
LG02:13895855..13906877
AA seq 632 aa
MPLLFLERFPWPSLRTYTALSVALLAGSIFSAYTTVTEQGFGFPDLDEPPPPAPSEGDNR
GGGLGLEHITTSDVADADTELATTVMWYLVTDSLFVWVLVNTACCSLMLVAKMIQCIVFG
PLRVSEKQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSALVFLHLMVQLCKDR
FEYLSFSPTTPMNSHVRVLALLGCLLLGCCGLAVVCGLLGAAHGMHTLSFMAAECLLVTV
RTGHVIMRYAIHLWDLNHPGTWENKGSYVYYTDFIMELAMLSLDLMHHIHMLLFGNIWLS
MASLVIFMQLRYLFHEVQRRVRRHKNYLRVINNMEARFAVATEEELVANNDDCAICWDSM
QTARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNITGDGGPARGQQQGAGLPLEDNLGP
GGPAADARPHLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQQANNSQLNAMAHQ
IQEMFPQVPYHLVLQDLQLTRSVDVTTDNILEGRIVVPFPALNAERPPPPMNPGPEEAAG
ASGGAEGGPSELDNLEVRGSRFSKSAEERQKMLLQRKDELLQQARRKYLRKSPEDEDLPT
LEEDAPVSDLTRRRTMAEAAERRMQSPQDPAP
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgcctttacttttcctggagagatttccctggcccagtctgcggacctacacagcgctg
agtgtggctctgcttgcgggaagcatcttcagcgcctacactactgtgacagaacagggg
tttgggtttccagacctggatgagcctccaccacctgccccctcagaaggggataataga
ggcggcggcctaggtctagaacatataaccactagtgatgttgcggatgcggatacagag
ctggcgaccactgttatgtggtacctcgtcactgacagtctatttgtatgggtgttggtg
aatacagcttgctgttctctgatgttggtggctaagatgatccagtgcatagtgtttgga
cccctccgagtcagtgagaagcagcacctgaaggacaaattctggaacttcattttctat
aagttcatcttcatctttggtgttctgaacgttcagacagtggaagaggtggtcatgtgg
tgtctatggttctctgccctggtcttcctccacctcatggtccagctgtgcaaagaccgc
tttgaatatctttccttctctccgactactcctatgaacagccacgtgcgtgtcttggcc
ctactgggttgtctgctgctgggctgctgtggtctggccgtagtctgtggcctcctggga
gccgcccatggcatgcacaccctttccttcatggctgctgagtgtctgctggtcacggta
cgaactggacatgtcatcatgaggtacgccatccacctgtgggacctgaaccacccaggc
acctgggaaaataagggatcctatgtctactacactgacttcatcatggagctggcaatg
ctgtccctggacctcatgcaccacatccacatgctgctgtttggtaacatctggctgtca
atggctagtctagtgatcttcatgcagttgaggtatctgttccacgaggtgcaacgccgt
gttcgacgccataagaactacctccgcgtcatcaacaatatggaggccagatttgcagtg
gccacagaagaagaacttgtggccaacaatgatgactgtgcaatctgctgggactccatg
caaacagcacgcaaactgccctgtggacacctcttccacaattcctgcctgcggtcatgg
ttggagcaggacacatcatgtccaacgtgcaggatgtccctgaacatcactggtgatggg
ggccctgccaggggtcagcaacagggggctggactcccactagaggataacctgggtcca
ggaggccctgctgcagatgccagaccacacctcaaccagcacaaccacttcttccacttt
gatggctcccgcatcgccagctggctgcccagtttctcggtagaggtgatgcacaccacc
aacatcttggggatcgcccagcaggccaacaactcccagctcaacgccatggcccatcag
attcaggagatgtttcctcaggttccctaccacctggtgctgcaggaccttcagttgacc
cgttctgtagatgtcaccaccgacaacattctagagggacgcatcgtggtgccctttcct
gctctgaacgctgagcgccctcctccgccgatgaacccaggcccagaggaggctgcggga
gccagtggaggggcggagggaggcccaagtgagctggacaacctagaggtcagagggagc
cgcttctccaagtctgctgaggagagacagaagatgttgctgcagaggaaagatgagctt
ctgcagcaggcgcggaggaaatatttaaggaagagcccagaggatgaagacctgcccaca
ctggaggaagacgcccctgtctcagatctgacccgacgcagaacaatggcagaagctgca
gagagacgcatgcagagcccacaggaccctgcgccctga

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