Esox lucius (northern pike): 105022661
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Entry
105022661 CDS
T04894
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
els
Esox lucius (northern pike)
Pathway
els03018
RNA degradation
els03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105022661 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
105022661 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105022661 (lsm7)
03041 Spliceosome [BR:
els03041
]
105022661 (lsm7)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105022661 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
105022661 (lsm7)
Spliceosome [BR:
els03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105022661 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
GPAT_C
Motif
Other DBs
NCBI-GeneID:
105022661
NCBI-ProteinID:
NP_001291049
UniProt:
C1BZQ2
LinkDB
All DBs
Position
LG03:13190195..13193168
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AA seq
111 aa
AA seq
DB search
MADRNQDRNKDGEKKKKESIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTI
EYLRDPDDQFKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgaaaccaggacagaaacaaggatggagagaagaaaaagaaagagagtatc
tttgacctgtccaagtacattgataaacaaattcgagtgaagttccagggaggacgagaa
gccagtggagttctaaaggggtttgaccccctgttgaacctggtgttggatagcactatc
gagtacttgcgagatcctgatgaccagttcaaactcacggaagacacacgacagttgggt
ctggtggtatgtcgagggacatccgtggtgcttatttgtcctcaggacggcatggaggcc
attcccaaccccttcatccagcagcaggatggatag
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