Esox lucius (northern pike): 105022794
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Entry
105022794 CDS
T04894
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105022794 (vps50)
Membrane trafficking [BR:
els04131
]
Protein recycling
Others
EARP complex
105022794 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
105022794
NCBI-ProteinID:
XP_010889818
LinkDB
All DBs
Position
LG10:complement(5309668..5420627)
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AA seq
970 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENFRIPSKEELRELRELPVDPQAEQEIINSIEEV
YYSNDSFDVMQHELEKLPPELNLQELEEYRDKRKRQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLSVSKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDFPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYVPCLSDLCKALWEVMLSYHRTMLWHEEHDKEKNAPTPIT
DEAGASETDDSLVDRSYVKKKLEHGLSRIWQEVQLKVKAYLLGTDMSNFKYDDFIVVLDV
ISRLIDVGEEFCGSKSELLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKTNF
NIAQLHEFRFMGQCRSPSVSPSRQVLPGPGPEDRSLFEQFSQEGNPFERQIDNKEEETEN
VLASNGYESDELEKSVYQDYDSDSDVPDELKQDYVDEQTGDVPLKSASRETLRSRKKSDY
SLNKGSAAPILTNTTLNVIRLVGKYMQMMNILKPISFDVIHCVSQLFDYYLYAVYTFFGR
NDTYESSGLGLISSRLRTTLNRIQESLIEMEPTGEGGSSVHGGPGEDRKEKVPSPHLSQL
VDLTASGTLFGLAQRVVATESLVFLAEQFDFLQSHLDSMMPGTKKPFLQQFYSQTVSTAS
ELRKPIYWIVAAKAIDYEQMLLMMAGVKWDIREIMSQHNIYVDVLLKEFEEFNQRLSDVS
KHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLERLTDI
RPIPDKEFVETYVKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLA
AIDDIDRPKR
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagataaagtcccttatggcccggcagggtctgaaaagcccacaggagagcatg
gcggaccttagccctgtagagaatttcaggatcccaagcaaggaggagttgagggagttg
agggagcttcccgtcgacccccaggcggagcaggagatcattaacagcatcgaggaggtc
tactactccaacgactccttcgatgtgatgcagcatgagctggagaaactcccacccgag
ctgaacttgcaagagctggaggagtatagagacaagcggaagaggcagcaagcagcggtt
tccaaaaaggttgctgatctcatcctggaaaagcagccatcctatgtcaaggagctggag
agggtgacttcactgcaaaccaacctgcagctggctgcagtgatctgcaccaatgctagg
aggcagctgagtgtttcaaaggagggcttcaccgaggccagcctggggctactggccaat
cagaggaggagacagctgctcacgggtttgctgaagtcactgagaaccatcaaaaccctg
caaaggactgatgttagactcagcgagatgctggaggaggaggacttcccaggtgccatc
cagttgtgtctggaatgtcagaaggctgccagcacattcaaacactacagctgcatcagt
gagttgaattctaagctacaagacactctggagcagatagaggagcagctggacgtggct
ctgtctaagacctgcaagcactttgacgtctcccactacaccaaggtccagcttgcgtac
acgctcctgggaaagacgcagacggccatggaccagctgcacatgcacttcacccaggcc
atccacaacaccgtgttccaggtggtccttgggtacgtggagctctgcgccgggaacgct
gacaccaagttccagaagatgcagtataaggacctctgcacgcacattactcccgacagc
tacgttccgtgcctgagcgacctgtgcaaggcattgtgggaggtgatgctgagctaccac
cggacaatgctctggcacgaggagcacgacaaggagaagaacgcccccacgcccatcaca
gatgaggcaggtgcttcagagactgacgattcccttgtggaccgctcctatgtaaagaag
aagctggagcatggccttagcaggatctggcaggaagtccagctaaaagtgaaagcctat
cttctggggacagacatgtccaacttcaaatatgatgacttcattgtggtcctggacgtt
atcagcaggctgattgacgtgggggaggagttctgtggcagtaagtcagagttgctgcag
gaatccatcaaacgccagagcgtcaactacttcaagaactatcaccggactcgtctggag
gagctgcggatgtttctggagaacgagacgtgggagctctgtcctgtcaagaccaatttc
aacatcgcccagctccacgagttccggttcatgggtcagtgccggtccccctccgtctct
cccagtaggcaggtgttgcccggcccaggtccggaggaccggtctctgttcgagcagttc
agccaggaggggaacccgtttgagaggcagatcgacaacaaagaggaggagacggagaat
gtgctggcttccaatgggtacgagtccgatgagttggagaagagcgtctaccaggactac
gacagcgacagtgacgtccctgatgagctcaagcaggactacgtggacgagcagaccgga
gatgttcctctcaagagcgcatcaagggagacgctgcgcagcaggaagaagtccgactac
agcctcaacaagggctccgccgctccgattctgaccaacaccaccctcaacgtgatccgt
ctagtcggcaagtacatgcagatgatgaacattttgaagcccatatccttcgatgtgatc
cactgtgtctcccagttgtttgattattatctgtatgccgtctacaccttcttcggccgc
aacgatacgtatgaatcatcgggacttggtctgatcagcagtcgactgagaacaacgctg
aaccgaatccaggagagcctgatcgaaatggagcctacgggcgaagggggctccagtgtc
catggcggtccaggggaggacaggaaggagaaggtgcccagccctcatctcagccagctg
gtggacctaacagccagcggaaccctctttggcctggctcagagggttgtcgccaccgag
tcactggtgtttctggctgagcagtttgacttcctgcagtctcacctggactccatgatg
ccgggcactaagaagccctttctacagcagttttactcacagactgtgtccacggccagc
gagctgcgtaaacccatctattggattgtggctgccaaggctatagactatgaacagatg
ctgctgatgatggctggagttaaatgggacatcagggagatcatgtcacagcacaacatc
tacgtggatgtccttttaaaggagtttgaggaatttaaccaaaggttgagtgatgtgtcc
aaacatgttcgaattccgctgcccgtgtccaatgtcctgtgggaacactgcatccgtctg
gccaacaggactctggtagaggggtatgccaacgtgaagaagtgcagcaacgaggggcgg
gctctgatgcagctcgacttccagcagttcctgatgaagctggagaggctgactgacatc
cggcccatacccgacaaggagtttgtggagacctatgtcaaggcctactacctgaccgag
aacgacatggagcagttcatcaagaaccacagggagtactccatgaaacagctggcaaac
ctggtgaatgtgtgcctgggctctcacatcaacaagaaggcccggcagaaactcctggca
gccatcgacgacatcgaccggccgaagagatag
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