Esox lucius (northern pike): 105022935
Help
Entry
105022935 CDS
T04894
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
els
Esox lucius (northern pike)
Pathway
els03030
DNA replication
els03420
Nucleotide excision repair
els03430
Mismatch repair
els03440
Homologous recombination
els03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105022935 (rpa1)
03420 Nucleotide excision repair
105022935 (rpa1)
03430 Mismatch repair
105022935 (rpa1)
03440 Homologous recombination
105022935 (rpa1)
03460 Fanconi anemia pathway
105022935 (rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105022935 (rpa1)
03032 DNA replication proteins [BR:
els03032
]
105022935 (rpa1)
03400 DNA repair and recombination proteins [BR:
els03400
]
105022935 (rpa1)
Transcription factors [BR:
els03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105022935 (rpa1)
DNA replication proteins [BR:
els03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105022935 (rpa1)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105022935 (rpa1)
MMR (mismatch excision repair)
105022935 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
105022935 (rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
Motif
Other DBs
NCBI-GeneID:
105022935
NCBI-ProteinID:
XP_010890056
LinkDB
All DBs
Position
LG01:20717900..20768603
Genome browser
AA seq
607 aa
AA seq
DB search
MTKTLTEGAIEALTKGSNDVHNPILQLVNIRKIDGGNGPARYRLMMSDGQYSMSSFMLST
QLNPMAEDNRLAPNCVCQLKRHVTNVLKDGRRVVVILDMEVVTSADSVAGKIGDPTPYVE
GQIKVPPIGPGPTVRPLLPQNGNDGSMNKGPGREFGMKKATPSSAMPSTPGGSSKVVPIA
SLNPYQSKWTIRARVTNKSGIRTWSNSRGEGKLFSMEIVDESGEIRVTAFTQEVDKFYSL
IETGKVFYISKGSLKIANKQYSSLKNDYEMTLNGESTIIPCEDTQDVPMVQCNFVSIGDL
EARDKDAIVDVIGVCKSVAEVTRLTTKNNREVSKRTLSLIDQSGKLVEVTLWGEEAENFD
GSGQPILAIKGAKLSDYGGRSLSASFSSTLMVNPDIPEAYKLRGWYDKDGHSMEGQSLTE
ARTGGGGGNTNWKTLGDIKTEHLGHGDKADYFSCIATIVFIRKENCLYQACPSQDCNKKV
VDQQNGMFRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQL
KDSNEAAFEEIFQQANFHTYVFRSRVKLETYNDESRIKATVMDVKPVDHKEYSKRLIINI
RKMAAAQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaacactgacagagggagcgatagaggctctaaccaaaggctctaatgatgta
cacaaccccattcttcaattagttaacatccgtaaaattgatggaggtaatggacccgcc
cgatatcgtctgatgatgagtgatggacagtactcgatgtcctcattcatgctgtctacc
cagctcaaccctatggctgaggacaaccgattggcgccaaattgtgtctgtcagctgaag
aggcatgtgactaatgttctcaaggatggacggcgtgtggtggtcatattggacatggag
gtggtgacgtctgctgattcggtagctgggaagatcggagaccccacgccttatgtggag
ggtcagattaaagtaccaccgataggccccggtcccacagtccgtccactgcttccccag
aatggaaatgatggctccatgaacaaaggtcccggccgagagtttgggatgaagaaggcc
acaccttcgtctgccatgcccagcactcctggaggcagctctaaagttgtgcccattgcc
agcctcaacccctaccagtccaagtggaccatccgcgcccgtgtcactaataagagtggc
atccgtacctggagcaactctcgcggtgaagggaagctcttctctatggagattgtggat
gagagtggggagatcagagtgactgcctttacccaggaggtggacaagttctacagcctc
attgaaactggcaaggtattctacatctccaaaggatccctgaaaatcgccaataagcag
tactcgtccctaaagaatgactacgagatgaccctgaacggagagtccacgatcatcccc
tgtgaggacacccaggatgtacccatggttcagtgcaactttgtctctattggtgacctg
gaggcccgagacaaggacgccatagtggatgtgattggagtgtgtaagagcgtggccgag
gtgacgcgtctgaccaccaagaacaaccgtgaggtgtccaagaggacactcagcttgatt
gaccagtctggaaaactggtggaggttaccctgtggggagaggaggctgagaactttgat
ggctctgggcagcccattctcgccatcaaaggggccaagctgtctgactatggaggcaga
tctctgtctgcctcgttcagcagcaccctcatggtcaaccccgacatcccggaggcttac
aagctgcggggctggtacgacaaggatggccactctatggagggccagtccctgacggag
gccagaacaggtggtggaggagggaacaccaactggaagaccttgggtgacatcaagacc
gagcacctcggacacggagacaaggcggactacttcagctgcattgccaccatagtgttc
atccgtaaggagaactgcctgtaccaggcttgccccagccaggactgcaacaagaaggtg
gtggaccagcagaacgggatgttccgctgtgagaaatgtgacaaagagttccccaacttc
aagtaccgacttattctctctgccaacatagcagactatggggacaaccagtgggtgacc
tgcttccaggaaagtgccgaagccatactgggacagaatgctgcctacctgggtcaactt
aaggactcgaatgaagctgccttcgaagagatctttcagcaggctaacttccacacatat
gtgttcagaagccgagtgaagctagagacttataatgatgagtctcgcatcaaggcaacg
gtgatggatgtgaaacctgtggaccataaggagtacagcaagagactcatcataaacatc
aggaagatggcggccgcccaataa
DBGET
integrated database retrieval system
