KEGG   Esox lucius (northern pike): 105022936
Entry
105022936         CDS       T04894                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
els  Esox lucius (northern pike)
Pathway
els03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    105022936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:els03400]
    105022936
DNA repair and recombination proteins [BR:els03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     105022936
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_Vps41 WD_LRWD1 Beta-prop_IP5PC_F WD40_RFWD3 WDR54 Beta-prop_NUP159_NUP214 RAWUL WD40_like Nucleoporin_N Tfb2_C
Other DBs
NCBI-GeneID: 105022936
NCBI-ProteinID: XP_010890019
UniProt: A0AAY5L484
LinkDB
Position
LG03:complement(12096730..12107406)
AA seq 681 aa
MAAHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHSDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHIYSGGRDKKIYCTDLRNPDIRVLICEEKASVLKM
ELDRSADPPPAIWVSTTKSSVNKWSLKGIHNFRASGDYDNDITTPLTPLCTTPEQVIKGG
ASIIQCHILNDKRHIVTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIKKRFKQVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSTDGSDPKLNLGGLLLQALLEFWPRTHIN
PMDEEEIEVNHAAVNGEQETRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETE
SMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVME
HVYEKIINLDTESQTTASSSAANDKPGEMEKDEDMALMAEEKIELMCQDQVLDPNMDLRT
VKHFIWKSGGDLTLHYRQKST
NT seq 2046 nt   +upstreamnt  +downstreamnt
atggcggcacaccacaggcagaatgccgctgggcgaaggaaagtacaggtgtcttatgta
ataagagatgaggtggagaaatacaatcgtaatggggttaacgctcttcaactggaccct
gccctgaacaggctgttcactgccgggagagactccatcatcagaatatggagtgtgaac
cagcacaagcaggacccttacattgcctctatggagcaccatacagattgggtcaacgac
attgtcctctgttgcaacggcaagacattgatttctgcctcgtcagacacaacggtgaaa
gtgtggaacgctcacaaaggattctgcatgtcaacgttacggacgcacaaggactatgtg
aaagccttggcctatgctaaagacaaggagctggtggcctcggcagggttggacaggcag
atcttcctgtgggatgttaacacgttaacagccctaactgcctcaaacaacaccgttacc
acgtcatcactcagtgggaacaaagactccatctacagcttggcaatgaaccagatgggt
acagtcatcgtgtctggctccactgaaaaggtcctgagagtgtgggaccctcgaacttgt
gctaaactcatgaagctgaaaggccactctgacaatgtcaagtcactgttgctgaacagg
gatggcacgcagtgtctttccggcagctctgatggcaccatccggctgtggtccttgggg
cagcagcggtgcatagctacataccgggtccacgatgagggggtctgggccctgcaggtg
aacgaagccttcacacacatctactcagggggccgagacaagaagatctactgcactgac
ctgaggaacccagacatcagagtactgatctgtgaagagaaggcgtctgtactgaagatg
gaactagacaggtcagccgaccctcctcctgctatctgggtctccaccaccaagtcatct
gttaacaaatggtctctaaagggaatccacaacttccgggcgtcaggcgattatgacaac
gacataaccactcccctgacccctctgtgtacgacacctgaacaggtcatcaaagggggt
gccagtataatccagtgtcacattctgaatgacaagaggcacattgtgaccaaagacacc
aacaacaacgttgccttctgggacgtgctgaaggcttgtaaaggagaagacctgggcaaa
gtagagttcgatgaggagattaagaagaggttcaagcaggtctacgtcccaaactggttc
tctgtcgacctcaaaacagggatgctgaccatcacgctagatgagagcgactgctttgct
gcctgggtttctgctaaagacgctggattctccagcactgatgggtctgaccccaagttg
aacctgggcggacttctacttcaagctctcctcgagttctggcccaggacgcacatcaac
ccaatggacgaggaggagatcgaggtcaaccacgcagcggtgaatggggagcaggagaca
cgggtccagaaggggaacgggtacttccaggttcctccacacactccagtaatcttcggg
gaggcaggagggaggactctgttccgtctgttgtgtagggactccgggggggaaacagag
tccatgctactgaatgaaaccgttccacagtgggtcatagacatcaccgtggataaaaac
atgcccaagttcaacaagatcccattctacctccagcctcattcgtcctctggtgcaaaa
acactaaaaaaggaccgtctgtctgccagcgacatgctccaagtgcgtaaggtaatggaa
cacgtctatgaaaagatcattaacctggataccgagtcccagaccacagcctcctcttca
gcggccaatgacaagccaggagagatggagaaggacgaggacatggccctcatggctgag
gagaagatagaactcatgtgtcaagaccaggttctagatcccaacatggacctgcgaact
gtcaaacattttatctggaagagcggaggggacttgacacttcattataggcagaaatct
acctga

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