Esox lucius (northern pike): 105023251
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Entry
105023251 CDS
T04894
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43 isoform X1
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105023251
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105023251
Spliceosome [BR:
els03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105023251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_2
SNF2-rel_dom
CMS1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
105023251
NCBI-ProteinID:
XP_010890616
UniProt:
A0A6Q2YWV1
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Position
LG06:complement(22255672..22279160)
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AA seq
737 aa
AA seq
DB search
MSDWEDEYDGSAPVTTGSKDFKSSRKWSEKENVCFGMRNGGGFEAPRGIADRNSSQCQKW
RGNDGGNGRVVSRSGCGNTRVCARGGRGGVADRSGFTLPVTFTVDNTSIGRVIGRGGAKI
RELEETSGARIKINKGDYEGEVHIFGSSEEQQKAREMIEQLVARDSFSWGFRSEPGRGGG
FGGRGGGGFGGRGLGVRRCGGFGSNGGGGGRRFGAEGGAEEGSSGSCWSTAALQASVEET
SPQAIDWNSLRQNRKKYEEMKWHDLPPLKKDFYIESETVASRSEDEVKAWRQANNNIFVD
DLKEEGEKRPFPNPVSTFEEAFQHYPGIMENIVRVGFSKPTPIQSQAWPVSLKGEDLIAI
AQTGTGKTLAYLLPGFIHMDGQPVENRKRDGPGMLVLTPTRELALQIESECNKYSYKGFK
CVCVYGGGDRWAQIKAISAGVDIVIATPGRLNDLQMNELINMRSITYLVLDEADRMLDMG
FEPQIMKILLDIRPDRQTIMTSATWPSGVRRLAKTYLKNPMMVYVGTLDLAAVNTVQQTV
LFCQEEEKKAYLFEFIHNMEPDDKVLIFVGKKIMCDDLSSDMCLRGLVVQSLHGDREQCD
REEALRDFKESVVRILVATDLASRGLDVTDITHVFNFDFPRNIEEYVHRVGRTGRAGRTG
ASVTLVTRGDWRMAAELIPILERAGQEVPVELVLMAERYAKHKREKDMFSPGGGRGGRGG
GGGGRGGRDRGESNWRF
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattgggaagatgaatatgacggatctgcgcctgttaccacaggctcgaaagat
tttaagtcttctagaaaatggagtgaaaaagaaaatgtgtgcttcgggatgagaaatggc
ggtggattcgaagcgccgcgagggattgcagatcgaaacagttcgcaatgtcaaaagtgg
aggggcaacgatggcggcaacggccgagtagtttcacggagtggatgtggtaacacacgt
gtttgtgcgcgcggtggccggggcggtgtggcagaccgttcgggttttacactgccggtc
actttcactgttgacaatacgtcaattggaagggttatagggcgcggcggagctaaaata
cgtgaacttgaagaaaccagcggtgcacgaatcaagatcaacaagggtgactatgagggt
gaggtgcatatcttcggaagcagtgaggagcagcagaaggccagagaaatgatcgagcaa
ctggtagccagagacagcttctcctggggattccgcagtgaaccagggagaggtggaggt
tttgggggtcgaggaggtggaggttttgggggtagaggtttaggggttcgtcgatgtgga
ggttttgggagtaatggaggtggaggcggcagaagatttggggctgaaggaggtgctgaa
gagggcagcagcggctcctgctggtcaactgctgccctacaggcatctgtggaggaaact
tctccacaggccattgactggaactccttgaggcagaaccggaagaaatacgaggagatg
aagtggcatgatctcccccctctaaagaaggatttctacattgagtcggagactgttgcc
agtcggagtgaagatgaagtgaaggcatggaggcaagcaaataacaatatctttgtggat
gacctgaaggaggaaggggagaagcgtccttttcctaaccctgtgtccacgtttgaagaa
gcctttcaacactatcctgggatcatggagaatattgtcagagtcggcttttccaagcca
actcctattcagtctcaggcctggcccgtgtcactgaaaggagaggacctgattgccatt
gcccagaccggcacagggaagaccctggcttacctcctgcctggcttcattcacatggat
gggcagcctgtagaaaacaggaagcgggatgggcccgggatgctggttctgacacccact
agagagttggctctgcagattgagtcagagtgcaacaaatacagctacaagggcttcaaa
tgcgtctgtgtgtacgggggtggagaccgctgggcccagatcaaagcaatctcagccgga
gtagacattgtgatcgccacaccaggtcgtctaaacgatctgcaaatgaacgagttgatc
aacatgcgttccatcacctacctggtgctggacgaggcagaccggatgcttgacatgggc
ttcgagcctcagataatgaagatccttctggacatccgtccagatagacaaactatcatg
accagtgcgacctggccctcaggagtaaggcgattggccaagacatacctgaagaatcct
atgatggtgtacgtgggaactctcgacctggctgctgtgaacacggtgcaacagacggtt
ctcttctgtcaggaagaggagaagaaggcctacctctttgagtttatccacaacatggag
cctgatgacaaagttctcatctttgttggcaagaagataatgtgtgacgatctgtccagt
gacatgtgtctgcggggcctggtcgttcagagcctccatggcgaccgggagcagtgtgac
cgtgaagaggctctcagggacttcaaagaaagcgtggtccgtatcctcgtggccactgac
ctagcctcccgagggctggacgtcaccgacatcacacacgtctttaactttgacttcccc
cgcaacattgaggagtatgtgcatcgcgtgggccgcacaggccgggcagggcgcactggg
gcctccgtcaccttggtaacaagaggagactggaggatggctgctgagctgatcccaatc
ttggagagagccggacaggaggtgcctgttgaactggtgctgatggcagagagatacgcg
aagcacaaaagagagaaggacatgtttagccccggtggaggaagaggaggacgaggagga
ggtgggggaggaagaggagggagagacaggggagagtcaaattggaggttctga
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