Esox lucius (northern pike): 105023275
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Entry
105023275 CDS
T04894
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105023275 (samd4a)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105023275 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
PHAT
SAM_3
Motif
Other DBs
NCBI-GeneID:
105023275
NCBI-ProteinID:
XP_010890650
UniProt:
A0A3P8YGU9
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Position
LG15:complement(18610603..18663590)
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AA seq
797 aa
AA seq
DB search
MMFRDQVGVLGSWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELHVLEG
EANNPGLISQWQGEPKERVISLVLSHLPLLKPGNVEAKGEYMRLLPRILAHTIEHGRHLE
ESRQLLSYALIHPATSLDDRAALALWLNHLEERAAARGDSLERPPPAPASHHQTPPSTLP
SSGSGSGSGGGHLGHLYHHQRYGSDDRLNGWQGSRDSGLGSGWHQQQGQGGGCENGGHLA
LYPSSSVPGSINTVGTGGSSNTILSGGGQHSPLKRSVSLTPPMSGGGSSAGSSSTAGGHA
LGLGHGWLSQEDLRGPRGSGGGGLAPADPHHAPLSPQSSVASSGSGGSEHPEDGGLVGGG
GGCCGGGGGGLHRGNTFHEEGSGMRVFPLDYCPGMAQRPPKQHPGPLGASRVGQGGSSQL
YNDVPAWLKSLRLHKYASLFSTMTYDEMMSLTEQQLESQNVTKGARHKIVISIQKLKERQ
NMLRCLEKDVLEGGNLRAPLAELHQMILTPIKAVAGGDDSSPSSPSSTGQRPLLSPEGKS
SAAPGSHLAPGGEGETGTTLIPEGDIPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDK
CLLHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDMAGYRAQRSNSSSRGFGQSNSLPT
AGCVGGGSLSTRRSLRQFQMPSRSLPGARLGLLGTTSLLGPTPRSASSTPTGLKQGRQGL
WFANPGGSNSMPSRTHSSVQRTRSLPVHTTPHTMVMFQQADLQVPVTEPDINNRLESLCL
SMTEHALGDGVDRTSTI
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgtgaccaggtgggcgtcctgggcagctggtttaaggggtggaatgagtgc
gagcagacagtggctttgctgtcgctgctaaagcgggtgtcacggacccaggcacgcttc
ctgcagctgtgtctggagcacagccttgcagagtgcaccgaactccacgtgttggagggg
gaggccaataacccagggttgatcagtcagtggcagggcgagcccaaggaacgcgtcatc
tccctggtcctcagccacctccctctgctgaagccaggcaacgtggaagccaagggcgag
tacatgcgcctcctcccccgcatcctggcacacaccatcgagcacggccgccacctggag
gagtcgcgccagctcctgtcctatgccctcatccacccggccacctcgttggacgaccgc
gccgccctcgccctctggctcaaccacctggaggagcgagccgccgcccggggcgactcg
ttggagcggccgcccccagccccggcctcgcaccaccagacgcccccgtcaaccctcccc
tcatcaggttccggatcgggctccggtggcgggcatctgggtcacctttaccaccaccag
cgctacggctcggacgaccggctcaatggctggcaggggtccagggactcagggttgggc
agtggttggcaccagcagcaggggcaaggaggagggtgtgagaacggtgggcacctggcg
ctctacccgtcctcctcggtgcccgggagtatcaacacagtgggcacgggcggcagcagc
aacaccatcctgtccggtggcgggcagcacagtcccctgaagcgctcggtgtccctcacc
cccccgatgagcggcggcggctcatcggccggctcctcgtccacggcgggcggccacgcc
ctggggctgggtcacggctggctctcccaggaagacctgcgcgggccacgggggagcgga
ggaggggggctggctcccgccgaccctcaccacgcacccctctccccccagagcagcgta
gcgtcgtcgggcagtggtggaagcgagcacccggaggacggaggtcttgtaggaggagga
ggaggctgctgtggaggaggagggggaggcttgcaccgcgggaatacgttccatgaagag
gggagcggcatgagggtttttcccctagattattgtccaggcatggcgcaaaggccccca
aagcaacatccaggccctctgggggccagcagagttgggcaggggggctcgtcccagcta
tacaatgatgtgccggcctggctgaaaagccttcgtctccacaagtatgcatcgctcttc
tccactatgacgtacgatgagatgatgtcactgacagaacagcagctggaatcccagaat
gtcaccaaaggggcacgtcacaagatagtgatcagcatccaaaaactgaaggagcgccag
aacatgctgcgatgtctagagaaggacgtgttggaggggggtaacctgcgcgcccctctg
gctgagctccaccagatgatcctgacgcccatcaaggcggtggctggcggtgacgattcc
tccccctcctccccctcctcgactggacagcgacccctgttgagccccgaggggaagagc
agcgccgcgccaggctcccacctggctcctggaggggagggggagacagggaccaccctc
atccccgagggagacatccctggccagtttacccgtgtcatgggaaaagtttgcacgcag
ctgctggtgtcgaggccggatgaagagaacatcagctcctacctgcagctcattgacaag
tgccttttacacgaggcattcaccgagacgcagaagaagcggctgttgtcatggaaacag
caggtgcagaagctgttccgatcatttcccaggaaaaccctcttggacatggcgggctac
cgggcacagaggagcaacagtagcagccgcggcttcggccagtccaactctctccccacg
gcgggctgcgtggggggtggcagcttgtcgacccgccggagcctgcgccaattccagatg
ccctcgcggagcctccctggtgcgaggctgggcctgctgggtaccaccagcctcctgggc
cccacgccacgcagcgccagcagtaccccaacaggcctcaagcaaggacggcagggtctg
tggttcgccaaccctgggggtagtaacagcatgcccagccggacccacagctcagtgcag
aggacccgttcccttccggttcacaccacgccacacaccatggtcatgttccagcaggct
gatctccaagtgccagtgaccgaaccagacatcaacaaccgactggagtctctgtgcctg
agtatgacagagcatgccctgggagatggagtcgaccgcacatccaccatctga
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