Esox lucius (northern pike): 105023451
Help
Entry
105023451 CDS
T04894
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
els03036
]
105023451 (chd9)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105023451 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Chromo_MIT1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
105023451
NCBI-ProteinID:
XP_010890959
LinkDB
All DBs
Position
LG02:14934554..15015600
Genome browser
AA seq
3057 aa
AA seq
DB search
MTDPIMDFFDDPNLFVAGLDGLAEDGFSSGPSLVDELNLSAGFEPLQVDPMGPGKHTGMI
PTSMPASTSTQRGMSYGQPMGHFAGMKAQNTLGQPFAGPEGVSGGAGLMMAAQHTQFHGR
SMGPAPESNGLFSNSSPMWGNQDQNGNLYHPMSQQQQLHQQQQLQLHDRQQLLRQQRPAA
QHPCQQQQLQQLQQHQLLAQQQHSFPFHQAGQPPAHHNQQLTIGGNQFHPRTVPNSGALA
KAYAETPNVTLGGAPPQQGSYQLVRGPQGAFPGVGPEDSSLTFSPMAHTRNLPSCSVSSA
AAYPPSQYAFPGQGQSGISGLSQPLSSAPVSMTSTAPLPSLVPELTLSGTGCPFSSTPEM
AQQQQPQQVPVSQAEEECPFRALRCSRQTQGNQGNYNSSEMFGQAMSCYPSAASQLVPDQ
HQPQGFGSNLEVTRPPASTATSNGFAALEDSLAGLQGEVEAQGGGFEGLEAPDLLADELL
PQLEAAFSQHDHHHPSCSWTNGGDGERDEEVQEEEKMVEEDNTISIDYEIKPPKNKNASG
PNSHAAARVLSPPVKSSSSSSSSSSSSYSSSSEKRAQRRLVLEQREQQLMELAGEDKQQK
ANRIIHEAIVKARERGEKNIPRVMSPESFPSGSSSAHRRERDRDRGRERERGSKTKTSKK
ARIVPSSKPKQKTKIGKIVIKFGGKKKRKTESSEDGSDDEPPPRRFSKDDDSKRRSNRQV
KRKKYAEEGESRVSDDEGKVIVKAKKTNSTAARKAPAMQLFVENPSEEDAAVVDKILSSR
IVKNEVSPGVIVEVEEFFVKYKNYSYLHCEWATEQQLEKDKRIQQKIKRFKIKQAQRAHF
FADMEEDPFNPDYVEVDRVLEVSYCEDKDSGEQVVYYLVKWCSLPYEDSTWELKGDVDQS
KIEEFEQLQAVRPDSRRMERPPASLWKKRDQSREYRNGNGLRDYQLEGVNWLLFNWYNRR
NCILADEMGLGKTIQSITFLEEIWRVGIRGPFLIIAPLSTIANWEREFRTWTYLNVIVYH
GSVVSRQMLQQYEMYFRDTQGRVVRDAYKFHAVITTFEMILGGCPELNAIEWRCIIIDEA
HRLKNKNCKLLEGFKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPQRFPSENTFMQEFG
DLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFS
FLSKGVGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILEDFRDVYSPVAFDFHLQAMVQ
SAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQA
AIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNK
AVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVPGGGPTQQQLSKKEIEDL
LRKGAYGALMDEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVSSGNRTDI
SLDDPNFWDKWAKKAEIDMDTVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGESDNE
EKPKLRRPHDRLNSYGRTECFRVEKNLLVYGWGRWKDILLHGRFKKQLTERDVESICRAL
LAYCLVHYRGDDKIKSFMWDLIAPSEDGQIKELQNHLGLSTPVPRGRKGKKMKTQSSTFD
IQKAEWIRKHNPEHMLQDEGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSQAQKVLDGVDS
SEIKIWVPEPDHCELPALWWDSISDKCLLLGVYKHGYEKYNTVRADPALCFLERVGRPDE
KAIAAEQRANDFMDGDVDDPEYKPAPALLKDDMEDDASSPGDLVITDNPGEGVPLTMEGG
GDAAYWPSSSVLTARLRRLITASQRYTKSRQILHIHQTQHTSPVTPSLCPLPPTLNHNIN
PKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDLGRFDWTKFRAMARLHKKTDESLQK
YLWAFTAMCRRVCRLPPREGDTAVDPSLSIQPITEERASRTLYRIELLRQVREQVLRHPL
LYERLPLCQLGSDLPVWWEVGTHDRDLLIGAAKHGVSRTDYHILRDPDLCFMAAQRNYSQ
NKGAQQSSLNPQYQASRDPPLPVLAPRERANSPEAVSKEEPPSEGGGALQSGGQVEEERW
SPQPAPLTPTGIEEKPDTAVVKAENESRMVAARTKPLTPNSAAREEKRANKRSRREARRA
ASAASDSDSDGSSSSSSSRSSSSSSSSSSSSSRSGSNSSSSSSSCSSGSSSSSSSSSSSS
DSESEREEGKPKVPTVAAVKGFDEDSVASLSTAQEDTPDSHTVENGVSNNSHHPFQGGYM
LAASYWPKDRVMINRLDSICQAVLKGTWPGARRAYEAGGAIASFYTTKLLDNAASISSNL
GSAPAASEEPSASPQGSKVKKHVAGEKEFSVKINEQEGSLKLTFQKQGPGQPLKRPLEPE
EGPLGQQQYLARLHELQSASDTSLADFTKPQAASFPHASADMAGPMRLNGAMDGQPVVKR
RRGRRKNVEGMDLLFMNRSRVPAVPDYVTPAWGGMAQAGLPAAPGQSYPPGGHAQGPMDR
ESRVPVINLKDGTRLAGDDAPRRSELELWLKEHPGFVADTGAFIPGVTKMQMQQFQQDGR
PKQKRHRCRNPNKIDVNSLTGEERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVP
PEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKSALAKAAAAANQGASSLGLNP
LLANGLLSGMDLSSFQAFQQNLQSLQSLQLTAGLMGLPTDANNLASMFPMMLSNMAGLPN
LLSMGGLLGKPPQDATVGPEQGKRKKGNRGGGGGGGGGGEEGGGGESSSASSKTASSSSS
LSQGPSHTSDTKGERTEGQIGVGESCAPSDPSTSGSAAATSNTPLSASAAQAASSHPLSV
NPLLLSNMLYPGMLLTPGLKLPVSTTEQPNSGSNSDHKAPKSTKTSKSLKTAPSKPLSPR
ETPERQEEEGLGDEGEESGEQKENSGPEGSGIAESSSSESGSSSSTSDGSSDSSDED
NT seq
9174 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcccatcatggacttctttgatgaccccaacctgttcgtggcggggctggac
gggctggctgaggacggcttctcttctggaccgtcgctggtggacgagctcaacctcagt
gccgggtttgagcccctgcaggtggacccgatggggccggggaaacacaccgggatgata
cccacctccatgcccgcctccacctccacccagcggggcatgtcctatggccagccgatg
ggacactttgcgggcatgaaggcacagaacaccctaggccagccctttgcagggcccgag
ggcgtgagcggcggagccgggctgatgatggcggcacagcatacccagttccacggacgc
tcgatgggcccggcacccgagtccaacgggctgttctccaacagcagcccgatgtggggc
aaccaggaccagaacgggaacctctaccatccgatgtcccagcagcagcaactacatcag
cagcagcagctgcagctccacgaccggcagcaactcctccggcagcagcggccggcagcg
cagcatccctgtcagcagcagcagcttcagcagttacagcagcaccagctcctggcccag
cagcagcacagcttccccttccaccaggccggccagccgccagctcaccataaccagcag
ctcaccatcggggggaaccagttccaccccaggaccgtgcctaactcgggggctctggcc
aaagcttacgcagagacccccaatgtcacgctgggcggagctcctccgcagcaggggagc
taccagctggtgcgggggcctcagggggcgttccctggggtgggcccggaggattctagc
ctgaccttctcccccatggctcacacccgcaacctgccctcctgctcagtcagctcagcc
gcagcctaccctccctcccagtatgccttccctggccagggacagtcgggcatctccggc
ctgagccagcctctctcttcagccccagtgtccatgaccagtacggcccctctgccctcc
ttagtgcctgagctcacgctctcggggaccggatgtccgttttcgtccaccccagagatg
gctcaacaacagcagccccagcaggtcccagtcagccaggctgaggaggaatgtcccttc
cgggccctgcgttgttccagacagacccaggggaaccaggggaactacaactcgtctgag
atgttcggccaggccatgagctgctaccccagtgcagccagccagctcgtcccagaccag
caccagccccagggctttggatccaacctggaagtgaccagacctccagccagcactgct
accagtaacggctttgcagccctagaagacagcctggcaggtctccagggggaggtggag
gcccagggagggggatttgaaggtctggaggccccagacctactggctgatgagcttctg
ccccagctggaggctgccttcagtcagcacgaccaccaccaccccagctgttcctggacc
aatggtggggacggagagagggatgaagaggttcaggaagaggaaaagatggtggaagaa
gacaacaccatttccatagactacgagataaagcctcccaagaacaaaaacgccagtggt
cccaacagccacgcggcagcgcgggtcctcagccccccggtgaagagcagctcgtcctcc
tcttcctcgtcttcgtcctcctacagctcatcgtctgagaagcgggcccagcggaggctg
gtgctggagcagagggagcagcagctgatggagctggccggagaggacaaacagcagaag
gccaaccggatcatccacgaggccatcgtcaaggcccgggagcggggggagaagaacatc
cccagggtcatgagtccagagagctttccctcaggcagctcttcggcccaccggagagag
agggacagggacaggggcagagagagggaaagaggcagcaaaaccaagacctccaagaag
gcccgcattgtaccttcgtccaagcccaaacagaagaccaagattgggaaaattgtcatt
aaatttggagggaagaagaagcggaagaccgaatcgtcagaggatgggtctgatgacgaa
cctccgcctcgaagattctctaaagacgatgactcgaagcgccggtccaaccgccaggta
aagaggaagaagtacgccgaggaaggcgagtccagggtgtctgatgacgaggggaaggtc
attgttaaagccaagaagaccaacagtactgcagcacgcaaagcacccgcaatgcagctg
tttgtggaaaaccccagtgaagaggacgctgctgttgttgacaagattctgtcatcacgg
atagtcaagaacgaggtctctccaggagtcattgtggaagtggaggaattctttgtgaaa
tacaaaaactactcctacctccactgtgagtgggccacggagcagcagctggagaaggac
aagagaattcagcagaagatcaaacgcttcaagattaaacaggcacagagggcccacttc
ttcgccgatatggaagaggatccctttaaccctgactatgtggaggtagacagagtactg
gaggtgtcctattgtgaagacaaggacagtggagagcaggtggtgtactacctggtgaag
tggtgctccctgccctacgaggacagtacgtgggaactgaagggggatgttgatcagagt
aaaatagaggagtttgagcagctgcaggcagtgaggccagactctcgcaggatggagcgt
cccccagccagcctgtggaagaagagggatcaatcgagggagtacaggaatggtaatggc
ctcagggactaccaactggagggagtcaactggctcctcttcaattggtacaacagacgg
aactgtatcctggctgatgaaatgggtctggggaagaccatccagtctatcacgtttctg
gaggagatctggcgtgtgggtatccggggacccttcctcatcatcgcccccctctccacc
atagcgaattgggagagggagttcagaacttggacctatctcaacgtcatagtctaccat
ggttccgtggtcagccggcagatgttgcagcagtacgagatgtacttcagagatacacag
ggccgtgtggtccgggacgcctacaagttccatgctgtcatcaccacctttgagatgatc
ctgggcgggtgtcccgaactcaacgctatcgagtggcgttgcatcatcatcgacgaggct
catcgcctcaagaacaaaaactgcaaactgttggagggattcaagctcatgaatctggaa
cacaaagttcttttgacagggacccccctgcagaacacggtggaggagctcttcagcctg
ctgcacttcttggagcctcagcgcttcccttcagagaacaccttcatgcaggagtttgga
gaccttaagacagaggaacaggtccagaagttgcaggccatcttgaagcccatgatgctg
cgtcgtctcaaggaggacgttgagaagaagctggctcctaaagaggagaccattattgag
gtggagctgaccaacatccagaagaagtactacagagccatcctagaaaagaacttctcc
ttcctatctaaaggagttggccaggccaacgtccccaacctggttaatactatgatggag
ttgaggaagtgctgcaaccacccctacctcattaaaggcgctgaggagaagattctggaa
gacttccgggacgtctacagcccggttgcctttgacttccacctacaggccatggtgcag
tcggctggtaaactggtcctcatagataaactgctgcccaaaatgaaggccgggggacac
aaggttctcatcttctcccagatggtccgctgcctggatatcctggaggactacctcatt
cagagaaggtacctgtatgagcgtattgatggcagagttagagggaacatgcgccaggcg
gccatagatcgcttcagtaagccggactcggaccgcttcgtgttcctgctgtgtacccgg
gctggaggcctgggcatcaacctgactgccgctgacacctgcatcatctttgactcagac
tggaacccacagaacgacctgcaggcccaggctcgctgccacagaattggtcagaacaag
gcggtgaaggtgtaccgtctgatcaccaggaattcgtatgagagggagatgttcgaccgg
gccagcctaaaactgggcctggacaaggctgtgctacagagcatgagtggcagggagaac
agtgtgcctggaggagggcccacacagcagcagctgtccaagaaggagatagaggacctg
ctgaggaagggtgcgtatggcgcgctgatggacgaggaggacgagggcgctaagttctgt
gaggaagacatcgaccagatcctccaacgcaggaccaagaccatcaccattgagtctgaa
ggacgggggtctactttcgccaaggccagttttgtatcatccggaaaccgcacggacata
tctctggacgaccccaacttctgggacaagtgggccaagaaggctgagatagacatggac
actgtcaacggcagaaacagccttgtgattgacacgccgagggtgaggaagcagacgcgt
cccttcagcgccaccaaggatgagctggcggagctgtccgagggggagagtgacaacgag
gagaagcccaagctccgccggccgcacgaccgcctcaacagttacggcaggacggagtgc
ttcagagtggagaaaaacctgctggtttacgggtggggtcgttggaaagacatcctcctt
catggtcgatttaagaagcagctgactgaacgtgatgtggagtccatctgtagagccctg
cttgcctactgtttggtccactaccgtggtgacgacaagatcaagagcttcatgtgggac
ctgatcgccccttccgaggacggacagatcaaggagctgcagaaccacctgggcctgtca
accccagtccccagaggaaggaaggggaagaagatgaagactcagtctagcacgtttgat
attcaaaaggctgagtggatcaggaaacacaacccagaacacatgctgcaggatgaagga
tacaagaaacaccttaaacaccactgcaacaaggtgctgctgcgggtcagaatgctctac
tacctgaaacaagaggtcatagggagccaggcccagaaggttctagacggcgtggactcc
agtgagatcaagatctgggtccctgagccggaccactgtgagctgccagccctgtggtgg
gacagcatctcagacaagtgcctgctgctgggggtgtacaagcacggttatgaaaagtac
aacacggtccgcgcagaccctgccctctgtttcctagaacgcgtgggacggccagacgag
aaggccatcgctgctgaacaaagagccaatgacttcatggatggggatgtggatgaccca
gaatataaacctgccccagccttgctaaaggacgatatggaggatgatgcctcctctcct
ggagacttggttatcacagacaaccctggagagggcgtaccgctgacaatggaaggtgga
ggagacgctgcgtactggccctcgtcctcagtgttgacagccagactgagacgtctgatc
acggcttctcagcgctacaccaaatccagacagatcctccacatccatcagacccagcac
acctccccggtcaccccctcactctgcccactgccacccacactcaatcacaatattaac
cccaagatggccgccaagatagaacgccagcagaggtggacgaggcgagaggaagctgat
ttctaccgtgtggtgtctaccttcggagtggtgtttgatccggacctgggccgcttcgac
tggacaaagttcagagccatggctcgactgcacaagaagaccgacgagagtctgcagaag
tatttgtgggccttcacagccatgtgcaggagagtgtgtcgcctgccacctagagaagga
gacaccgctgtggatccctctctgtccatccagcccattacagaggagcgggcatctcgt
accctctacagaatcgagctgctgcggcaggtccgggagcaggtgctccgtcaccccctg
ctctacgagcgcctgcccctgtgccagctaggctccgacctgcctgtgtggtgggaggtc
ggtacccacgacagagacctcctgatcggagccgccaagcacggcgtcagccgcacagac
taccacatcctccgagacccagacctctgcttcatggccgcgcagagaaactacagccag
aacaaaggagcccagcagtcatccctgaacccccagtaccaggccagtagagacccacca
ctgcccgtcctagccccgagggaacgggcaaactccccagaagcagtgtcaaaggaagag
cctccctctgagggggggggtgctctgcagagtgggggccaggtagaggaggagagatgg
agtcctcagcctgcccccctcacccccaccgggatagaggagaagccagacacggccgtg
gtcaaagcggagaacgagagtcgcatggtggccgcgcggaccaagcctctcacccccaac
tcagccgccagggaggagaagagagccaacaagaggagtcgtagggaggccaggcgagcc
gcctccgccgcgtctgactcggactccgacggctcctcgtccagctcttcgtcacgctcc
tcttcatcgtcgtcgtcctcctcctcctcctcgtcacgatcagggtccaactcgtcctcc
tcgtcttcatcgtgctcatcgggctcctcttcctcttcttcctcctcctcctcttcctct
gatagtgaaagtgagcgggaggaagggaagccaaaggttccgacggtggccgctgtgaag
ggctttgacgaggacagcgtggcgtccctcagcaccgctcaggaagacacaccggacagt
cacactgtggagaacggcgtcagcaacaactcccaccacccctttcagggaggctacatg
ctggctgcatcctactggcccaaggaccgtgtgatgatcaaccgcctggacagtatctgc
caggccgtgctgaaggggacgtggccgggggccaggcgggcatacgaggcgggaggtgcc
atcgcctccttctacaccaccaagctgctggacaatgctgccagcatcagcagtaacctg
ggctctgccccagccgcctcggaggagccctctgcctcccctcagggttcaaaggtgaag
aagcatgttgcaggagaaaaggagttctcagtgaaaatcaatgaacaggaggggagtctg
aagctgaccttccagaagcaggggcccggccagcccctgaagaggcccctggagcctgag
gaagggcccctgggccagcagcagtacctggccaggctccatgagcttcagagtgcctca
gacacaagtctggctgacttcaccaagccccaagctgccagtttcccacatgcctctgca
gacatggctggtccaatgaggctgaacggagcgatggacggccaaccggtggtgaaaagg
aggaggggaaggaggaagaacgttgaagggatggacctgctcttcatgaacaggagcaga
gtcccagccgtgccagattatgtgaccccggcgtggggtggtatggcccaggctggactc
cctgcagcccctgggcagagttaccccccggggggccatgcccagggcccaatggacaga
gagagcagggtccctgtcatcaatctgaaagatgggaccaggcttgctggagatgacgcc
cccaggaggagtgagctggagttgtggctgaaagaacacccaggctttgtggctgacacg
ggggccttcattcctggggtgaccaagatgcagatgcaacagtttcagcaggacggtcgg
cccaaacagaagagacatcgctgcagaaaccccaacaagatcgatgtcaacagtctgact
ggagaagagagggtacagatcatcaacaggagaaacgcccggaaggttggtggtgccttc
gccccccctctgaaggacttgtgtcggtttcttcaggagaacccagagtatggggttcca
ccagagtgggccgatgtcgtcaaacagtcaggctacctcccagagagcatgtttgaccgg
atcctgacaggaccaattgtaccagaggaggtgagtcgacgtggacggaggcccaagagc
gccctggccaaagctgccgccgcagccaaccagggggcctcttccctgggcctcaacccc
ctgcttgccaacggcctcctctctggcatggacctgtctagtttccaggccttccagcaa
aacctccagagtcttcaatccctgcagctcaccgctggccttatgggccttcccactgat
gctaacaaccttgcctcaatgtttcccatgatgctttcaaacatggccgggctccccaac
ctcctgagcatggggggtctgctgggaaagcccccacaggacgccactgttggaccggag
caagggaagaggaagaagggaaacagaggaggaggaggaggaggaggaggaggaggagaa
gaaggaggaggaggggagtcctcatctgcttcctccaaaaccgcctcctcctcctcttcc
ctctcccagggtccatcccacacctctgacaccaaaggtgaaaggacagaaggtcaaatc
ggtgtcggggagtcctgtgcccccagtgacccttccacctctggttccgctgctgccacc
tccaacaccccactaagtgcttctgctgcccaggcggcctccagtcacccgctgtctgta
aaccccttgttactctccaatatgctttatccagggatgcttctcactccaggccttaaa
cttcctgtatccaccacagagcagccaaacagtggctcgaacagtgaccacaaagccccc
aaatccaccaagacatccaagtcccttaagaccgccccctcaaaacccctttcgccccgg
gaaacaccagaacggcaggaagaggagggtcttggtgatgagggggaggagtcaggggag
cagaaggagaacagtggtccagagggctcggggatagcggagtcatcttcatcggaatcg
gggagctcctcttcaacatctgatgggtcatcagactccagcgatgaagactga
DBGET
integrated database retrieval system
