Esox lucius (northern pike): 105023958
Help
Entry
105023958 CDS
T04894
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
els03036
]
105023958 (hfm1)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105023958 (hfm1)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Meiosis-specific proteins
Others
105023958 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Hamartin
Motif
Other DBs
NCBI-GeneID:
105023958
NCBI-ProteinID:
XP_028974439
LinkDB
All DBs
Position
LG03:complement(10052127..10068606)
Genome browser
AA seq
1637 aa
AA seq
DB search
MLDSEDCTLSLDNLFFERPVVHKVKPLCYDQSSWQLEAAPSLSQIPTTQDIQKEAEGLSS
FSFCQKSKKFLPPLKRAVSSDSFTAKDTNLHQNIIDGGKGPDDLSRCAIWAQEDITNNLL
DSTKVSRGQTETPPEKVPLDFSQRPNLRRSLFKPPSGLVPNSDANVYSGHGQPRPGPQQT
PNQVTMATEPWTVGQSAAVPRPITGLGHPAPLGSTQEPPDLGTKGAHVLPMTPRPLHIQG
TSGSGILRPVLEIPAKFRSVFKEFPYFNYVQSKALDDVLYTSKNFVACAPTGSGKTVLFE
LAIIRLLMETTEPWRNVKAVYMAPIKALCSQRFEDWKKKFGPLGLICMELTGDTEIDDFF
EIQDAHIIMTTPEKWDSMTRKWRDNCLLQLVRLLLIDEVHVVKDKMRGATLEVVVSRMKA
VRACHASEHHGEDLPMRFVAVSATIPNIKDIADWLCDGKGPATSLEMDESHRPVKLRKVV
LGFPCSSNQTEFKFDLSLNYKMANIIQTYSEQKPTLVFCSTRKGVQQSAAVLAKDAKFIM
SLEHKQRLVKYANSLLDFKLRDLVTFGVGFHHAGVDVSDRKVIEEAFILGDLPVLFTTST
LAMGVNLPAHLVVIKSTAHYAGGACQEYSEADMLQMIGRAGRPQFDTSATAVIMTKTQTR
DKYMQFMNGAEVIESSLHTHLVEHLNAEIVLHTISDVNMALDWIRSTFLYIRALKNPKHY
GFSTGLDRCGIEAKLQELCLKNLNSLASIGLISMDEDINIKATEAGRLMARYCVAFDTMK
QFNTVSGTETLPELIELMAKGREFADVQLRVNEKRTLNTLNKDKNRVTIRYPMEGKVKNN
EMKVNCLIQAQFGSIPIQEFGLTQDTGRIFRNGVRISRCLAEFLNQRSKTGFTALLNSVI
LAKCFRAKLWENSPYVSKQLEKIGLTLSTAMVNAGLTTFNRIEQSNARELELIINRHPPF
GNQIREAVMNLPKYEVSLEQLPRYNTDTAEVVVTVNMKNHEQLLSKRTTPDHHYVTMIIG
DCDNNVVFLQKLTDLMLLKTGSWSKKIDVAKASNGEEISVNLISSEYVGLDIQQRFSAFY
SGPKRYGAESLTTEQHSIMQREQGGTQRAQLTSREKQAAPHKRKLIFTCATETDSGKRQC
NHFCKNKDQCGHECCKSGVPVLLKRPGNQHSSFSSHLHDLKIRSDSLKETPVKRLKIKIG
GGSEAGKMQQFSYTAKPKLPAAPRYEGNQFVVSTRPRSVESAEDLASPHEMACLETSGGE
HNDSLENMYQKMGEQPPPVQSPTESPNTTFSAKPCGYNGGPLSHNIPQRVQQTQNTGYHQ
SPHQSRGYHQSPHQSRGYHQSPHQSRGYHQSPHQSRGYHQSPHQSQGYHQSPLQSRGYPQ
STPQSRGYHQSPHQSQGYHQSPLQSRGYPQSPHQNRGYHQSTPQNRGYHQSTPQNRGYHQ
SPPQNMPYSLSAVIDLTDDSGFVSSTFDLGDEWDNWDDFDDDNLVRASEMSCMTVANSEG
VDLDQDRPKGHSALLLSTGVQPKPHLSLSSTPLRSTSPVVPLIAKDKHSNIQHPNLWPSA
PWNPFGNKAPRSFIEPPVKAPPPSFQKRTDTSLAPLVRRFDFFTKPTTLNNDNGRRFGEE
DNCKEVETFLGIFDGIF
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgttggactctgaagactgtactttgtccctggataacctgttctttgagaggccagtc
gtccataaagtaaagccactttgctacgatcagagttcttggcagttggaagccgctccg
tccctctcccagatcccaaccacccaggacatccagaaagaggcagagggtctttcatca
tttagtttctgtcagaagtccaagaaattcttgccacctttgaaaagagcagtgagcagt
gatagtttcacagccaaggatactaatttacatcagaatatcattgatggaggaaaggga
cctgatgacctgagcaggtgtgccatctgggctcaggaagacatcacaaataatttgttg
gattccactaaagtcagcagaggtcaaactgaaactccaccagagaaagtccctctggac
tttagccaaagaccaaatctgcgtagaagtttattcaaaccccccagcggactggtgccg
aacagcgatgccaacgtgtacagcggccacggtcagccaagacccggaccacagcaaacc
cccaatcaggttaccatggcgacggagccttggacagtgggccagtcggcagcggtaccg
agacccatcactggcctgggccaccctgcacccctgggatccacacaggagccaccggac
ctagggacaaagggggctcacgtcctccccatgacgccgcggccccttcacatacaaggt
acttctgggtccggaattctcagaccagtcttggaaatccctgcaaaattccgatccgtc
ttcaaagagttcccttacttcaactatgtccagtccaaagccttggacgatgttctttac
acgagtaagaactttgtggcatgtgctcctactggctccggtaagaccgtgctctttgag
ttggccatcattcgcctgctgatggagaccacagagccctggagaaatgtcaaagctgtg
tacatggcccccatcaaagccctatgcagccagcgctttgaggactggaagaagaaattt
gggcctctgggcctgatctgcatggagctgaccggcgacacagaaattgatgacttcttt
gagattcaggatgcccatatcatcatgaccacaccggaaaaatgggatagcatgaccagg
aagtggagggataactgcctgctgcagttagtgcgtctccttcttattgacgaggtccat
gtggtgaaggacaagatgcgcggagcgactctagaggtggtggtgagcagaatgaaggct
gtccgtgcctgccatgcctcagagcaccacggggaggacctccccatgagatttgtggcc
gtctctgccaccatacccaatatcaaggatatagcggactggctgtgtgacggcaaaggt
cccgctaccagtcttgagatggatgagagtcacagaccagtgaagctgaggaaggttgtc
ctgggcttcccctgcagcagcaaccagacagagtttaagtttgacctgtcgctcaactac
aagatggccaacatcattcagacctactcggagcaaaaaccaacacttgttttttgctca
acgaggaaaggagtccagcagtctgctgctgttttagccaaagatgccaagttcataatg
agccttgagcacaagcaaaggttggtgaagtatgcaaattctctcctggacttcaaactc
agagacctggtgacgtttggggttgggttccaccacgctggggtcgacgtgtctgacagg
aaggtgattgaggaggccttcatcctgggagacctccctgtactctttacgaccagcact
ctggcaatgggggtgaacctaccggcccacctggtggtgatcaagtccacggcgcactac
gccgggggagcttgccaggagtacagcgaggccgacatgctgcagatgattggccgagcg
ggccggccgcagtttgacacctcagcgaccgcagtgatcatgaccaagactcaaaccagg
gacaagtacatgcagttcatgaacggcgcagaggtcattgagagcagcctgcacacccat
ctcgtggagcacctgaacgctgagattgtcctccacaccatctcggatgtcaacatggcc
ctggactggatccggtccacattcctctacatccgagctctgaagaaccccaaacactat
ggtttttccactggcttggaccgatgtggaatcgaagccaagttgcaagagctttgtcta
aagaacctgaactccctggcctccattggtctgatctccatggacgaggacatcaacata
aaagccacagaggctggccggctaatggcaaggtactgtgtggcgtttgacaccatgaaa
cagttcaacacggtgtctggcacagagaccttacctgaactgatagagttgatggcgaag
ggcagggagtttgctgatgtgcaactgagagttaacgagaagagaaccctgaacacgctg
aacaaggacaagaaccgggtcaccatcaggtatcccatggaggggaaggttaaaaacaac
gagatgaaggtgaattgtttgattcaggcccagtttggctccattcctatccaggagttt
ggactcacacaggacacagggagaatcttccggaatggagtccgaatcagcagatgcttg
gcagaatttctaaaccagcggtccaagacaggtttcactgctctgctcaactctgtgata
ctggccaagtgcttcagagccaagctgtgggagaactccccatatgtctcaaaacaactg
gagaaaatagggttaacactgtccacagccatggtgaatgccggactcacaacatttaat
cggatagagcagtccaacgccagagaactggagctgatcatcaacagacaccctccattt
ggaaaccaaatcagagaggctgtcatgaatctacccaaatatgaagttagtttggaacag
cttccgagatacaacacagacaccgcagaggttgttgtgaccgtgaatatgaagaaccat
gaacagctgctgtcaaagagaaccactcctgatcaccactatgtcaccatgatcatcggg
gactgtgacaacaacgtggtgttcctgcaaaaactcacagacttgatgctgttgaagacc
ggaagctggtcaaagaagatcgacgtggcgaaagcttcaaacggagaagagatcagcgta
aatctcatcagctcagaatatgtgggattggacattcagcagaggtttagcgccttctat
tctggaccaaagaggtacggagctgaatccctcaccacagagcaacacagcatcatgcag
cgagaacagggcggaacacagagagcacagctcacatctcgggaaaaacaggctgcgcca
cataagagaaagctcatattcacctgcgccacagaaaccgattcaggcaaaagacaatgt
aaccacttctgcaaaaacaaggaccagtgtggccatgaatgctgtaaaagtggcgtgccg
gtgcttctgaaaaggcctgggaatcagcactctagtttctcctcccatctccatgacttg
aaaatcaggagtgactccctgaaagagacaccagtcaaacgcctcaagattaaaataggt
ggtggcagtgaggctgggaaaatgcagcaattctcttacacagcaaagccaaaattacct
gctgctcccaggtatgaagggaatcagtttgttgtttccacaagaccacggagtgtggaa
tcagctgaggacttagcaagcccccatgagatggcatgtctggagaccagtggcggtgaa
cataatgactcactggaaaacatgtatcagaaaatgggagaacaacctccaccagttcaa
agccctacagagtcaccaaacactaccttctcagcaaaaccctgtggttataatggagga
cctcttagccacaacattcctcaaagagttcagcaaacccagaacacaggttaccatcag
agcccccaccagagccgaggttaccatcagagcccccaccagagccgaggttaccatcag
agcccccaccagagccgaggttaccatcagagcccccaccagagccgaggttaccatcag
agcccccaccagagccaaggttaccatcagagccctctccagagccgaggttaccctcag
agcaccccccagagccgaggttaccatcagagcccccaccagagccaaggttaccatcag
agccctctccagagccgaggttaccctcagagcccccaccagaacagaggttaccatcag
agcacaccccagaacagaggttaccatcagagcaccccccagaacagaggttaccatcag
agccccccccagaacatgccctactctctgagtgccgtcatagacttaactgatgacagt
ggctttgtctcatcgacctttgacctgggagacgaatgggacaactgggatgattttgac
gacgacaacttggtgcgcgccagtgagatgtcttgcatgactgtagcgaactctgagggg
gtggacctggaccaagacaggccaaaaggtcactcagcactacttctgtcaactggtgta
caacccaaaccccatttatcgttgtcctctaccccactccggtcaacatcaccagttgtc
cctctgatagcaaaagacaaacactccaatatccaacatcccaacctctggccttctgca
ccctggaatccctttggcaacaaggcaccaaggtccttcatcgaacccccggtgaaagca
ccaccaccatcgttccaaaaacggactgacacaagcttggctccactggtcaggcggttt
gatttctttacaaagccaaccaccctgaacaatgacaatggaagaaggtttggagaagag
gacaactgcaaagaagtggagacattccttgggatatttgatggaatattctaa
DBGET
integrated database retrieval system
