Esox lucius (northern pike): 105023969
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Entry
105023969 CDS
T04894
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
els
Esox lucius (northern pike)
Pathway
els03030
DNA replication
els03410
Base excision repair
els03420
Nucleotide excision repair
els03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105023969 (rfc2)
03410 Base excision repair
105023969 (rfc2)
03420 Nucleotide excision repair
105023969 (rfc2)
03430 Mismatch repair
105023969 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
els03032
]
105023969 (rfc2)
03036 Chromosome and associated proteins [BR:
els03036
]
105023969 (rfc2)
03400 DNA repair and recombination proteins [BR:
els03400
]
105023969 (rfc2)
DNA replication proteins [BR:
els03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105023969 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
105023969 (rfc2)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105023969 (rfc2)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105023969 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
105023969 (rfc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_22
nSTAND_NTPase5
AAA_14
AAA_16
Viral_helicase1
Mg_chelatase
Rad17
RCF1-5-like_lid
AAA_11
RuvB_N
AAA_19
AAA_24
nSTAND3
MipZ
AAA_assoc_2
AAA_18
AAA_28
AAA_5
ABC_tran
AAA_23
AAA_25
SLFN-g3_helicase
AAA_30
RNA_helicase
AMP-binding_C_3
NTPase_1
MeaB
DUF815
FtsK_SpoIIIE
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
105023969
NCBI-ProteinID:
XP_010891848
UniProt:
A0A3P8YCE6
LinkDB
All DBs
Position
LG07:16470720..16476404
Genome browser
AA seq
368 aa
AA seq
DB search
MLEDLLFYVAERAVNMDVEMNEVDSKQVETEVKPKKDEAPTKVSSAGYELPWVEKYRPVK
LNEIVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVMELN
ASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTR
FALACNASDKIIEPIQSRCAVLRYTKLRDEQIMMRLLEVVERENLVTSNDGLEAIIFTAQ
GDMRQALNNLQSTNSGFGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKIIEQLW
ALGYSPEDIIGNIFRVCKTFQMPEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLGRLCS
KTANLNSS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgttagaagatttgctgttttatgttgcagagcgagcggtaaatatggacgtggagatg
aatgaggtagattctaaacaagttgaaacagaagttaaaccgaagaaagatgaggcccca
acgaaagtgtctagcgctggatatgagttgccatgggttgaaaaatacagaccagtgaag
ttaaacgaaatagtcggcaacgaggagactgttagcaggttggaggtgtttgccagagag
ggaaatgtacccaacatcattattgcaggtccccctggtacaggaaagaccaccagtatt
ctgtgtttggcacgagctcttctagggccagcaatgaaagatgctgtaatggaactgaat
gcctccaatgacagaggtattgatgtagttcgaaataagatcaagatgtttgcccagcag
aaagtcaccctccctaaagggagacacaagatcatcatcctggatgaagctgacagtatg
acagacggagcccagcaggccttgaggaggaccatggagatctattctaaaaccactcgc
tttgctttggcgtgcaatgcctccgacaagataattgagcccatccagtcacgttgcgca
gtcctgcgctacaccaagcttcgggacgagcagatcatgatgcgtctgctggaggtggtg
gagagggagaacctagtcaccagcaatgatggcctggaggccataatcttcaccgcccag
ggagacatgagacaggcactgaataacctacagtccacaaattctgggtttggctatatc
aacagtgagaatgtattcaaggtttgtgatgagccacacccactgttggtgaaaagcatg
ctggaacattgtgtcaatgcaaacattgatgaggcctacaagattattgagcagctttgg
gccctgggttactcccctgaggacataatcggtaacatattcagagtgtgcaagacattc
cagatgcctgaatatctgaagttggagttcatcaaggaaataggctacacacacatgaaa
gtggcagagggtgtgaactccctgctacagatggcaggcctactgggtcgactgtgcagc
aagacagccaaccttaattccagctaa
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