Esox lucius (northern pike): 105024074
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Entry
105024074 CDS
T04894
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
els
Esox lucius (northern pike)
Pathway
els04010
MAPK signaling pathway
els04020
Calcium signaling pathway
els04510
Focal adhesion
els04540
Gap junction
els04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105024074 (pdgfd)
04020 Calcium signaling pathway
105024074 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105024074 (pdgfd)
04540 Gap junction
105024074 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
105024074 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
els04052
]
105024074 (pdgfd)
Cytokines and neuropeptides [BR:
els04052
]
Cytokines
Growth factors (RTK binding)
105024074 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
NAPRTase_C
Motif
Other DBs
NCBI-GeneID:
105024074
NCBI-ProteinID:
XP_010892033
LinkDB
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Position
LG01:31621692..31681637
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AA seq
411 aa
AA seq
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MNSLGRMALALALALLECFSRDARAQVMSAKVMRPSNVRRDGEFSMYLYRKEEVVTVTAA
GGNILSPRFPNSYPRNLLLSWKLLSAHNTHISLEFDSHFGLEEPDNEVCRYDFVEVEDIS
ETSTITWGRWCGQRPPPRITSKSNTLNVTFKSDDYFVAKPGFKLYYSLLDVSPPTASKSN
WEAVTLMNDYSSVFAPAVTEVPLTAAALDQTIAAFDTVEQLLRHLNPDSWKQDLENLSRE
TSIYRPRSFQQSSRHHKIDLDRLHDDVKRYSCTPRNYSVNLREELRATNAVFFPRCLLVK
RCGGNCACGTDNWNGCDCSPAKTSVKLHEATPLKAHWTVGRDTALGLTAVYISTLLSAVL
RCPPSTPHCPAATQPNPKLFSPWGIHEGLLNSRCTCRRVHIHAVVCFRVHI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtttagggcgcatggctctcgcgctggcgctcgcactgctggagtgtttttcc
cgggatgcacgagcccaggtaatgtcagccaaggtgatgcgtccttctaacgtgaggcga
gatggtgagttttcgatgtacttgtaccggaaagaagaggttgtcacggtaacggcggcg
ggcggaaacatcctgagcccccgcttcccaaactcctacccccggaacctgctgttgtcg
tggaaactactgtcggcccacaacacccacatcagcctggagtttgactcccacttcgga
ctggaggagccggataatgaagtctgcaggtatgactttgtggaggtggaggacatctca
gagaccagcactattacctgggggagatggtgtggtcagaggcccccccctcgcatcacc
tccaaatccaacaccctcaatgtcaccttcaagtccgacgactactttgtggccaaacct
ggatttaaactctactactctctgctggatgtctcccctcctactgcatcgaagagtaac
tgggaggctgtgaccctgatgaatgattattcatcggtgtttgctccagcggtaacggag
gttcctctgaccgcagctgcactggaccaaaccattgcagccttcgacaccgtggagcag
ctcctccgtcacctcaaccccgacagctggaaacaagacctggagaacctgagtagagag
accagcatttacagaccccgatcctttcagcagagcagcagacatcacaaaattgacctg
gaccgcctgcacgatgacgtgaagcgctacagctgtacgccccgtaactactccgtcaac
ctgagggaggagctgagggccaccaacgctgtcttcttcccacgatgcctcctggtgaaa
cgctgtggggggaactgcgcctgcgggacggacaactggaacggctgtgactgcagcccg
gccaagaccagcgtcaagctacatgaggccaccccgctgaaagcccactggacggtgggg
agggacacagctctgggactgactgctgtctacatctccacccttctctctgcagtgctc
cgctgccctccatccaccccccattgtcctgctgccacccagccaaaccccaaattgttc
tccccctggggcattcatgagggactgttaaattcaaggtgcacatgtcgtcgtgttcat
atccatgccgttgtatgtttccgtgttcacatttga
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