Esox lucius (northern pike): 105024157
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Entry
105024157 CDS
T04894
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X2
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
els
Esox lucius (northern pike)
Pathway
els03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105024157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105024157
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
105024157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
105024157
NCBI-ProteinID:
XP_010892195
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MTSLGGSSSSSTEYTVRVPKNNSKKYSIMAFNSGDKVNCSTWTQARMERDMSNRRMYGGE
ETEEGAAGSEFGKKQREEARRKKFGIVTREFKVEDQPWILKINGKAGKRFKGQKKGGVTE
NASYYIFTQCPDGAFEAFPVNGWYNFVPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREQERGPDDEDEEGEKGGKKKKKKKGARGGDLRIHDLEDDLELSSDESDSSREEGDNK
PKKKESVAKGKGKKKKKKRGSDSEANEDSDDGDYEGLEVDYMSDESSSEEEAGEEKAKSN
KEDGPKGIDEASDTEDESEEEKQNEEEGKEEEEEEEGKKTPVQMEKKKKRDSSGESDTSE
DSDIDGEAASALFMKKRTPPKRGGGRGSGGSSRTGSRPGTPSIDSASTSNTLRAAASKLE
QGKRQVLGGSSDSPAAKRLKMEPGSTATTTQSPAPSGKSTPQPPSGKSTPSSSDVQLTEE
AVRRYLIRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcactgggtgggagcagttcctcttctacagagtatacagtccgggtccccaag
aacaacagtaagaagtacagcatcatggcatttaactctggggacaaagtcaactgctcc
acctggacccaggctcgtatggagcgggacatgagtaacaggaggatgtatggtggggag
gagactgaggagggggcggcgggcagtgagtttggaaagaagcagcgtgaggaggcgcgc
aggaagaagtttggcatcgtcaccagggagttcaaggtggaggaccagccctggatcctc
aagatcaatggcaaggcagggaagagatttaagggtcagaagaaagggggcgtgaccgag
aacgcgtcctactacatattcacccagtgtcctgacggtgcctttgaggctttccctgtg
aacggctggtacaactttgtcccccaggccaaacaccggacactgactgccgaggaggcg
gaggaggagtggggcaggaggaacaaggtggtgaaccacttcagcatcatgctccagagg
cgtctccgggagcaggagagagggccagatgacgaagacgaggagggcgagaaggggggt
aagaaaaaaaagaagaaaaagggagcaagaggaggtgaccttcgtatccacgacctggag
gacgacctggagctgagcagcgacgagagcgacagcagcagagaagaaggagacaacaag
ccgaagaagaaggaatcagttgcaaagggcaaggggaagaagaagaagaagaagaggggg
agtgacagcgaagcaaatgaggacagtgacgatggagactatgagggactggaggttgat
tatatgtcagatgaaagcagctccgaggaagaggccggcgaagagaaagccaagtccaat
aaggaggacggccctaaaggaattgatgaggcctcggacactgaggacgagagtgaggag
gaaaaacagaatgaagaagagggcaaagaggaggaggaggaagaggaagggaagaagacc
ccagtccagatggaaaaaaagaaaaagagagacagtagcggcgagtcagacacttcagag
gacagcgacatcgatggagaggcagcctcagctctctttatgaaaaagcgtactcctcct
aagcgcggtggtgggcgtggctctggtggtagctccaggactggcagtcgccctgggaca
ccatccatagactccgcctccacctccaacacactccgtgctgctgccagcaaactggag
caaggtaagagacaggtactgggtggtagctcagactctccagctgccaagaggctgaag
atggagcctggaagcacagcaactaccacccagagtcctgccccctcagggaagagcaca
ccacagcccccctcaggcaaatcaacacccagctccagtgacgtccagctgaccgaagag
gcagtacgtcgctacctaatccgcaagcccatgaccaccaaggacttgctgaagaagttc
cagaccaagaggacaggcctgagcagcgagcagaccgtcaacgtcttggctcagatccta
aaacgcctcaaccccgagaggaagaacgtcaacgacaagatgcacttctacctaacagaa
tga
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