Esox lucius (northern pike): 105024333
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Entry
105024333 CDS
T04894
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
els
Esox lucius (northern pike)
Pathway
els03040
Spliceosome
els05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105024333
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105024333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105024333
Spliceosome [BR:
els03041
]
Common components
Common spliceosomal components
SR proteins
105024333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
PRP38_assoc
SET_assoc
Motif
Other DBs
NCBI-GeneID:
105024333
NCBI-ProteinID:
XP_010892506
UniProt:
A0AAY5K8T6
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Position
LG23:5354241..5361264
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AA seq
335 aa
AA seq
DB search
MSGCRIFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGGGRFPDRYGRGSQDSRRTNQPNGQPTN
RNPPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLK
NALEKLSGKEINGRKIKLIEAAKKRSSRSRSRSDSSSRSRSRSRNRSQSRSRTPRRSRSH
TPKSRSPKSHSPKRDYNRSRSRSRSPRSHSGSPAPRTGGAVPASPSPRAKENSAKRPSKP
SKSVSPHSPPPAQRAPSRSRSRSRGSRSPSVDSRH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgtcgcatttttattggccggttgaacccctccgccagagagaaggacgtt
gagagattcttcaaaggatacggacgcatccgagacatcgacctcaaaaggggatttggc
tttgtggagtttgacgatcccagggatgctgaggatgcggtttacgagctggacggcaag
gagctctgcaatgagagggtgaccattgagcatgctcgcgtgcgcctgcgtggcggccgt
gggcgtggaggtgatagaggaggtggtggtggaggaggaggaggtcgcttcccggatcgt
tacggcagaggctctcaggatagtcggaggacaaaccaaccaaatggacagccgacaaat
aggaacccccctccgatgcgtacagaaaaccgtctcattgtggagaacctctcatcccgt
gtcagctggcaggacctgaaagatttcatgagacaggctggggaggtcacattcgcggac
gcccaccgcccgaagctcaacgaaggggtcgttgagtttgcttcttacagcgatctgaag
aatgccctggagaagctgtctggcaaggagatcaatggaaggaaaatcaagttgatcgag
gcagctaagaagcggagttccaggagtcgttcccgctccgacagctcctcccgttcccgc
tcccgttcccgtaaccgttcccagtctcgctccaggacccctcgtcgctccaggtcccac
actcccaaatcccgttcccccaaatcacattcccctaagcgggattacaaccgctcccgc
tctcgttctcgctccccccggtctcacagcggctccccggccccccgcacgggaggggct
gtccccgcctccccatcccccagggccaaggagaattccgccaaacgtccctccaagccc
agcaagtctgtctctccccactcccctccccctgcacagcgtgcgccctctaggtccaga
tctagatctcgtgggtcccgctccccgtccgtggacagccgccactga
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